Academic Journal

Virome Status of Preclonal Candidates of Grapevine Varieties (Vitis vinifera L.) From the Slovenian Wine-Growing Region Primorska as Determined by High-Throughput Sequencing

التفاصيل البيبلوغرافية
العنوان: Virome Status of Preclonal Candidates of Grapevine Varieties (Vitis vinifera L.) From the Slovenian Wine-Growing Region Primorska as Determined by High-Throughput Sequencing
المؤلفون: Vanja Miljanić, Jernej Jakše, Urban Kunej, Denis Rusjan, Andreja Škvarč, Nataša Štajner
المصدر: Frontiers in Microbiology, Vol 13 (2022)
بيانات النشر: Frontiers Media S.A., 2022.
سنة النشر: 2022
المجموعة: LCC:Microbiology
مصطلحات موضوعية: Vitis vinifera L., preclonal candidates, HTS, viruses, viroids, Microbiology, QR1-502
الوصف: Diseases caused by viruses and virus-like organisms are one of the major problems in viticulture and grapevine marketing worldwide. Therefore, rapid and accurate diagnosis and identification is crucial. In this study, we used HTS of virus- and viroid-derived small RNAs to determine the virome status of Slovenian preclonal candidates of autochthonous and local grapevine varieties (Vitis vinifera L.). The method applied to the studied vines revealed the presence of nine viruses and two viroids. All viral entities were validated and more than 160 Sanger sequences were generated and deposited in NCBI. In addition, a complete description into the co-infections in each plant studied was obtained. No vine was found to be virus- and viroid-free, and no vine was found to be infected with only one virus or viroid, while the highest number of viral entities in a plant was eight.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1664-302X
Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.830866/full; https://doaj.org/toc/1664-302X
DOI: 10.3389/fmicb.2022.830866
URL الوصول: https://doaj.org/article/adef73ac3c3344caba2cc4100c8ef9ef
رقم الانضمام: edsdoj.f73ac3c3344caba2cc4100c8ef9ef
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:1664302X
DOI:10.3389/fmicb.2022.830866