Academic Journal

Molecular Identification Of Trichoderma Strains Collected To Develop Plant Growth-Promoting And Biocontrol Agents

التفاصيل البيبلوغرافية
العنوان: Molecular Identification Of Trichoderma Strains Collected To Develop Plant Growth-Promoting And Biocontrol Agents
المؤلفون: Oskiera Michał, Szczech Magdalena, Bartoszewski Grzegorz
المصدر: Journal of Horticultural Research, Vol 23, Iss 1, Pp 75-86 (2015)
بيانات النشر: Sciendo, 2015.
سنة النشر: 2015
المجموعة: LCC:Plant culture
مصطلحات موضوعية: fungal barcoding, multilocus sequence analysis, phylogeny, species identification, Plant culture, SB1-1110
الوصف: Trichoderma strains that are beneficial to both the growth and health of plants can be used as plant growth-promoting fungi (PGPF) or biological control agents (BCA) in agricultural and horticultural practices. In order to select PGPF or BCA strains, their biological properties and taxonomy must be carefully studied. In this study, 104 strains of Trichoderma collected at geographically different locations in Poland for selection as PGPF or BCA were identified by DNA barcoding, based on the sequences of internal transcribed spacers 1 and 2 (ITS1 and 2) of the ribosomal RNA gene cluster and on the sequences of translation elongation factor 1 alpha (tef1), chitinase 18-5 (chi18-5), and RNA polymerase II subunit (rpb2) gene fragments. Most of the strains were classified as: T. atroviride (38%), T. harzianum (21%), T. lentiforme (9%), T. virens (9%), and T. simmonsii (6%). Single strains belonging to T. atrobrunneum, T. citrinoviride, T. crassum, T. gamsii, T. hamatum, T. spirale, T. tomentosum, and T. viridescens were identified. Three strains that are potentially pathogenic to cultivated mushrooms belonging to T. pleuroticola and T. aggressivum f. europaeum were also identified. Four strains: TRS4, TRS29, TRS33, and TRS73 were classified to Trichoderma spp. and molecular identification was inconclusive at the species level. Phylogeny analysis showed that three of these strains TRS4, TRS29, and TRS33 belong to Trichoderma species that is not yet taxonomically established and strain TRS73 belongs to the T. harzianum complex, however, the species could not be identified with certainty.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2300-5009
Relation: https://doaj.org/toc/2300-5009
DOI: 10.2478/johr-2015-0010
URL الوصول: https://doaj.org/article/21aafc6f77034a2a8925150af549a4db
رقم الانضمام: edsdoj.21aafc6f77034a2a8925150af549a4db
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:23005009
DOI:10.2478/johr-2015-0010