Academic Journal
ANAT 2.0: reconstructing functional protein subnetworks
| العنوان: | ANAT 2.0: reconstructing functional protein subnetworks |
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| المؤلفون: | Yomtov Almozlino, Nir Atias, Dana Silverbush, Roded Sharan |
| المصدر: | BMC Bioinformatics, Vol 18, Iss 1, Pp 1-5 (2017) |
| بيانات النشر: | BMC, 2017. |
| سنة النشر: | 2017 |
| المجموعة: | LCC:Computer applications to medicine. Medical informatics LCC:Biology (General) |
| مصطلحات موضوعية: | Network inference, Protein-protein interaction network, Subnetwork reconstruction, Cytoscape plugin, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5 |
| الوصف: | Abstract Background ANAT is a graphical, Cytoscape-based tool for the inference of protein networks that underlie a process of interest. The ANAT tool allows the user to perform network reconstruction under several scenarios in a number of organisms including yeast and human. Results Here we report on a new version of the tool, ANAT 2.0, which introduces substantial code and database updates as well as several new network reconstruction algorithms that greatly extend the applicability of the tool to biological data sets. Conclusions ANAT 2.0 is an up-to-date network reconstruction tool that addresses several reconstruction challenges across multiple species. |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 1471-2105 |
| Relation: | http://link.springer.com/article/10.1186/s12859-017-1932-1; https://doaj.org/toc/1471-2105 |
| DOI: | 10.1186/s12859-017-1932-1 |
| URL الوصول: | https://doaj.org/article/001430ed56f146f38b535f938b911234 |
| رقم الانضمام: | edsdoj.001430ed56f146f38b535f938b911234 |
| قاعدة البيانات: | Directory of Open Access Journals |
Full Text Finder | تدمد: | 14712105 |
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| DOI: | 10.1186/s12859-017-1932-1 |