التفاصيل البيبلوغرافية
| العنوان: |
Transcriptome analysis (RNA-sequencing) of cultivated wild rice (Zizania palustris L.) and Bipolaris oryzae at 24 h and 48 h of their interaction. ... |
| المؤلفون: |
Castell-Miller, Claudia V., Kono, Thomas J.Y., Samac, Deborah A., Kimball, Jennifer A. |
| بيانات النشر: |
Data Repository for the University of Minnesota (DRUM) |
| سنة النشر: |
2024 |
| المجموعة: |
DataCite Metadata Store (German National Library of Science and Technology) |
| مصطلحات موضوعية: |
RNA sequencing, disease resistance, innate immunity, virulence, effectors |
| الوصف: |
We designed a transcriptome study to understand the global gene expression between a cultivated wild rice, Itasca – C12, and the Bipolaris oryzae isolate TG12Lb2 at 12 h and 48 h of their encounter. Wild rice activated numerous plant recognition receptors, followed by active transcriptional reprogramming of signaling mechanisms driven by Ca+2 and its sensors, mitogen-activated protein kinase cascades, activation of an oxidative burst, as well as phytohormone signaling bound-mechanisms. Several transcription factors associated with plant defense were found to be expressed. Importantly, evidence of diterpenoid phytoalexins, especially phytocassane biosynthesis, among other defense genes was found. In B. oryzae, predicted genes associated with pathogenicity, including secreted effectors that could target plant defense mechanisms, were expressed. ... : The datasets contain expressed genes of the Northern Wild Rice (Zizania palustris L.) obtained during Bipolaris oryzae infection versus those expressed by mock-inoculated (water) plants at 24h and 48h. It also contains Bipolaris oryzae transcripts during infection of Northern Wild Rice compared to those expressed by the fungus in vitro at 24 h and 48 h. ... |
| نوع الوثيقة: |
dataset |
| اللغة: |
unknown |
| DOI: |
10.13020/9kja-aj88 |
| الاتاحة: |
https://dx.doi.org/10.13020/9kja-aj88
https://hdl.handle.net/11299/258544 |
| Rights: |
Creative Commons Zero v1.0 Universal ; https://creativecommons.org/publicdomain/zero/1.0/legalcode ; cc0-1.0 |
| رقم الانضمام: |
edsbas.CF8512CC |
| قاعدة البيانات: |
BASE |