التفاصيل البيبلوغرافية
| العنوان: |
Additional file 2 of A novel approach to co-expression network analysis identifies modules and genes relevant for moulting and development in the Atlantic salmon louse (Lepeophtheirus salmonis) |
| المؤلفون: |
Zhaoran Zhou (11721468), Christiane Eichner (80845), Frank Nilsen (71512), Inge Jonassen (682), Michael Dondrup (84754) |
| سنة النشر: |
2021 |
| المجموعة: |
Smithsonian Institution: Digital Repository |
| مصطلحات موضوعية: |
Genetics, Gene co-expression network analysis, Regularized logistic regression, Differential co-expression analysis, Regulatory impact factor, Transcriptome, Salmon louse, Moult, RAB1A |
| الوصف: |
Additional file 2 Table S1: Homologues-based transcript-phenotype list Table S2-S3: Analysis results for the modules in the middle network and moulting network, including module size, enriched GO terms with smallest p-values, p-values of enrichment analyses based on homologues, module preservation Zsummary, number of known moulting-associated genes, proportion of TF and DE genes. Table S4: Analysis results for the modules in the global network, including module size, enriched GO terms with smallest p-values, p-values of enrichment analyses based on homologues, regularized logistic regression coefficients, number of known moulting-associated genes, proportion of TF and DE genes. Table S5-S7: Module assignment results for the known moulting-associated transcripts in the middle, moulting and global network; the ranks of these transcripts based on three types of centrality measurements within modules; whether they were intramodular hubs or not. Table S8: Two types of RIF scores for the transcripts annotated as transcription factors Table S9-S11: Centrality measurements, average ranks and annotations for the nodes in three selected modules (yellowgreen, steelblue and violet). Table S12: Annotations of the nodes with highest average ranks from the selected modules. Table S13: Available RNAi results for nodes from the eight selected important modules and nodes with high average ranks from modules without passing any criteria. |
| نوع الوثيقة: |
dataset |
| اللغة: |
unknown |
| Relation: |
https://figshare.com/articles/dataset/Additional_file_2_of_A_novel_approach_to_co-expression_network_analysis_identifies_modules_and_genes_relevant_for_moulting_and_development_in_the_Atlantic_salmon_louse_Lepeophtheirus_salmonis_/17037501 |
| DOI: |
10.6084/m9.figshare.17037501.v1 |
| الاتاحة: |
https://doi.org/10.6084/m9.figshare.17037501.v1 |
| Rights: |
CC BY + CC0 |
| رقم الانضمام: |
edsbas.C20C0CDC |
| قاعدة البيانات: |
BASE |