Conference
Estimation of Haplotype Frequencies from Pooled Targeted Sequencing in Maize Landraces
| العنوان: | Estimation of Haplotype Frequencies from Pooled Targeted Sequencing in Maize Landraces |
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| المؤلفون: | Raphaël, Minguella, Canaguier, Aurélie, Madur, Delphine, Hinsinger, Damien, Nicolas, Stephane, Faivre Rampant, Patricia |
| المساهمون: | Etude du Polymorphisme des Génomes Végétaux (EPGV), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre d'Etude du Polymorphisme Humain (CEPH), Institut Universitaire d'Hématologie (IUH), Université Paris Diderot - Paris 7 (UPD7)-Université Paris Diderot - Paris 7 (UPD7)-Fondation Jean Dausset-Université Paris Cité (UPCité), Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale) (GQE-Le Moulon), AgroParisTech-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) |
| المصدر: | 2ème carrefour de la sélection maïs https://hal.inrae.fr/hal-04670321 2ème carrefour de la sélection maïs, May 2024, Saclay, France. 2013, ⟨10.1093/molbev/mst016⟩ |
| بيانات النشر: | CCSD |
| سنة النشر: | 2024 |
| المجموعة: | Institut National de la Recherche Agronomique: ProdINRA |
| مصطلحات موضوعية: | polymorphism SNP, Pool, NEBnext Direct Genotyping Solution, haplotype, [SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] |
| جغرافية الموضوع: | Saclay, France |
| الوصف: | International audience ; Maizelandraces harbor a wider diversity than inbred lines and hybrids that canbe harnessed for plant breeding Although this diversity has been largely studiedin the past, much more remains to be done However, analyzing it requires togenotype many individuals per populations A solution to reduce the cost of thestudy is to genotype pools several plants of a given accession are mixed, thenthe DNA extraction is done in pool In addition, using short haplotypes usuallyimprove population structure inference but requires sequencing For thispurpose, we hijacked a targeted Genotyping By Sequencing tGBS technologyto sequence haplotypes from targeted genomics regions chosen among themany QTLs being known in maize |
| نوع الوثيقة: | conference object still image |
| اللغة: | English |
| DOI: | 10.1093/molbev/mst016 |
| الاتاحة: | https://hal.inrae.fr/hal-04670321 https://hal.inrae.fr/hal-04670321v1/document https://hal.inrae.fr/hal-04670321v1/file/MineLanDiv_poster3.pdf https://doi.org/10.1093/molbev/mst016 |
| Rights: | info:eu-repo/semantics/OpenAccess |
| رقم الانضمام: | edsbas.B943D9CE |
| قاعدة البيانات: | BASE |
| DOI: | 10.1093/molbev/mst016 |
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