التفاصيل البيبلوغرافية
| العنوان: |
Microbiota-tissue interaction in the skin healing of ulcered Sparus aurata after dietary administration of the probiotic SpPdp11 |
| المؤلفون: |
Isabel Maria Cerezo Ortega, Olivia Perez Gómez, Rocio Bautista Moreno, Pedro Seoane Zonjic, M. Angeles Esteban, M. Carmen Balebona, Miguel A. Moriñigo, Silvana Tapia-Paniagua |
| بيانات النشر: |
Zenodo |
| سنة النشر: |
2022 |
| المجموعة: |
Zenodo |
| مصطلحات موضوعية: |
Aquaculture, Fish, Microbiota, RNA-seq |
| الوصف: |
Figure S1. Rarefaction curves of microbiota skin samples Figure S2. Relative abundance (%) of bacteria at the phylum in the skin mucus microbiota of fish feed with control diet without (C) and with wound (CW); fish feed with probiotic diet without (P) and with wound (PW) Figure S3. Relative abundance (%) of bacteria at class in the skin mucus microbiota of fish feed with control diet without (C) and with wound (CW); fish feed with probiotic diet without (P) and with wound (PW). c__ non taxonomy classify OTUs at this categorise Figure S4. Relative abundance (%) of bacteria at genera level in the skin mucus microbiota of fish feed with control diet without (C) and with wound (CW); fish feed with probiotic diet without (P) and with wound (PW). g__ non taxonomy classify OTUs at this categorise Figure S5. Volcano plots of differentially expressed genes (DEGs) between groups, expression data plotted with correct p value cutoff FDR < 0.05 and log2 fold change absolute value >= 1.3. Fish feed with control diet without (C) and with wound (CW). Fish feed with probiotic diet without (P) and with wound (PW). Figure S6. Significant functional enrichment network (A) of the "Cellular Component" and (B) "Molecular Function"GO categories (with their adjusted p) , from the DEGs obtained in the comparison of PW vs CW. Brown nodes indicates functional categories. Red to blue nodes indicate the log 2 fold change values. Figure S7. Functional enrichment network of the KEGG terms from the DEGs obtained in the comparison of PW vs CW. The brown nodes indicate the KEGG categories, red and blue nodes show the repression overexpression and repression genes in the skin of the ulcerated probiotic group. Figure S8. Functional enrichment network of the Reactome categories from the DEGs obtained in the comparison of PW vs CW. The brown nodes indicate the Reactome categories, red and blue nodes show the repression overexpression and repression genes in the skin of the ulcerated probiotic group. Histogram shows that the categories were ... |
| نوع الوثيقة: |
article in journal/newspaper |
| اللغة: |
unknown |
| Relation: |
https://doi.org/10.5281/zenodo.7254363; https://doi.org/10.5281/zenodo.7470520; oai:zenodo.org:7470520 |
| DOI: |
10.5281/zenodo.7470520 |
| الاتاحة: |
https://doi.org/10.5281/zenodo.7470520 |
| Rights: |
info:eu-repo/semantics/openAccess ; Creative Commons Attribution 4.0 International ; https://creativecommons.org/licenses/by/4.0/legalcode |
| رقم الانضمام: |
edsbas.A85F00F4 |
| قاعدة البيانات: |
BASE |