التفاصيل البيبلوغرافية
| العنوان: |
DataSheet1_Identification and Structure Analysis of KCS Family Genes Suggest Their Reponding to Regulate Fiber Development in Long-Staple Cotton Under Salt-Alkaline Stress.xlsx |
| المؤلفون: |
Cun Rui (11035152), Xiugui Chen (2833109), Nan Xu (107466), Jing Wang (6206297), Hong Zhang (25820), Shengmei Li (12038639), Hui Huang (4122), Yapeng Fan (11035149), Yuexin Zhang (640788), Xuke Lu (2833106), Delong Wang (1794073), Wenwei Gao (4642873), Wuwei Ye (2833100) |
| سنة النشر: |
2022 |
| المجموعة: |
Smithsonian Institution: Digital Repository |
| مصطلحات موضوعية: |
Genetics, Genetic Engineering, Biomarkers, Developmental Genetics (incl. Sex Determination), Epigenetics (incl. Genome Methylation and Epigenomics), Gene Expression (incl. Microarray and other genome-wide approaches), Genome Structure and Regulation, Genomics, Genetically Modified Animals, Livestock Cloning, Gene and Molecular Therapy, Gossypium barbadense, 3-ketoacyl-CoA synthase, long chain fatty acids, phylogenetic analysis, expression analysis |
| الوصف: |
Plant 3-ketoacyl-CoA synthase (KCS) gene family catalyzed a β ketoacyl-CoA synthase, which was the rate-limiting enzyme for the synthesis of very long chain fatty acids (VLCFAs). Gossypium barbadense was well-known not only for high-quality fiber, which was perceived as a cultivated species of Gossypium. In this study, a total of 131 KCS genes were identified in four cotton species, there were 38, 44, 26, 23 KCS genes in the G. barbadense, the G. hirsutum, the G. arboreum and G. raimondii, respectively. The gene structure and expression pattern were analyzed. GBKCS genes were divided into six subgroups, the chromosome distribution of members of the family were mapped. The prediction of cis-acting elements of the GBKCS gene promoters suggested that the GBKCS genes may be involved in hormone signaling, defense and the stress response. Collinearity analysis on the KCS genes of the four cotton species were formulated. Tandem duplication played an indispensable role in the evolution of the KCS gene family. Specific expression analysis of 20 GBKCS genes indicated that GBKCS gene were widely expressed in the first 25 days of fiber development. Among them, GBKCS3, GBKCS8, GBKCS20, GBKCS34 were expressed at a high level in the initial long-term level of the G. barbadense fiber. This study established a foundation to further understanding of the evolution of KCS genes and analyze the function of GBKCS genes. |
| نوع الوثيقة: |
dataset |
| اللغة: |
unknown |
| Relation: |
https://figshare.com/articles/dataset/DataSheet1_Identification_and_Structure_Analysis_of_KCS_Family_Genes_Suggest_Their_Reponding_to_Regulate_Fiber_Development_in_Long-Staple_Cotton_Under_Salt-Alkaline_Stress_xlsx/19113629 |
| DOI: |
10.3389/fgene.2022.812449.s001 |
| الاتاحة: |
https://doi.org/10.3389/fgene.2022.812449.s001 |
| Rights: |
CC BY 4.0 |
| رقم الانضمام: |
edsbas.926634FA |
| قاعدة البيانات: |
BASE |