التفاصيل البيبلوغرافية
| العنوان: |
Sequence and expression analysis of GmSWEET39 alleles. |
| المؤلفون: |
Hengyou Zhang (3620171), Wolfgang Goettel (263028), Qijian Song (277210), He Jiang (784474), Zhenbin Hu (3248133), Ming Li Wang (718200), Yong-qiang Charles An (9629169) |
| سنة النشر: |
2020 |
| المجموعة: |
Smithsonian Institution: Digital Repository |
| مصطلحات موضوعية: |
Biochemistry, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Developmental Biology, Plant Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, sugar transporter gene, high-confidence bi-parental linkage., GmSWEET 39, seed coat, dual-use seed crop, soybean protein improvement, soybean improvement, soybean seed quality improvement, QTL, protein improvement, GmSWEET 39 haplotypes, two-nucleotide CC deletion truncati., North American soybean cultivars |
| الوصف: |
( a ) A schematic diagram shows the sequence variation that occurs in the 6th exon between the two parental lines of the RIL population, Willams82 and PI479752. ( b ) The CC deletion in Williams82 causes a reading frameshift and a truncated protein at the C-terminus. ( c ) GmSWEET39 is 19 amino acid shorter in Williams82 than it in PI479752. ( d ) Predicted transmembrane domains in GmSWEET39. The sequence differences as shown in (b) and (c) were highlighted with the gray dotted rectangle. ( e ) Comparison of the 3D protein structure between Willams82 and PI479752 GmSWEET39 proteins. The difference in the structure at the C-terminal tails is highlighted with rectangles in blue and red. ( f ) Sequence alignment between the C-terminal peptides of the SWEET homologs from different species including legumes. The putatively conserved region was highlighted with the rectangle in red. ( g ) GmSWEET39 is conserved at the amino acids essential for disaccharide transport. ( h ) A bar plot showing the expression pattern of GmSWEET39 in different soybean tissues and the whole seeds at different maturation stages. ( i ) Relative expression of GmSWEET39 in different subregions of developing seeds of soybean cultivar Williams 82 (CC deletion) at globular, heart, and cotyledon stages. ( j ) Relative expression pattern of CC-deleted GmSWEET39 in the sub-regions in developing seeds of Williams 82 at the early maturation stage. ( k ) Cartoon depicting the expression patterns of GmSWEET39 in different tissues/compartments of globular, heart, cotyledon, and early maturation seeds of Williams 82 (CC deletion). Abbreviation: AB—Abaxial; AD—Adaxial; AL—Aleurone; AX—Axis; Cot—Cotyledon; EP—Embryo Proper; EPD—Epidermis; ENT—Endothelium; ES—Endosperm; FBUD—Floral Bud; HG—Hourglass; HI—Hilum; II—Inner Integument; OI—Outer Integument; PA—Palisade; PL—Plumule; PY—Parenchyma; RM—Root Meristem; S—Suspensor; SC—Seed Coat; SM—Shoot Meristem; VS—Vascular Bundle. The seed images were acquired from http://seedgenenetwork.net/sequence . |
| نوع الوثيقة: |
still image |
| اللغة: |
unknown |
| Relation: |
https://figshare.com/articles/figure/Sequence_and_expression_analysis_of_i_GmSWEET39_i_alleles_/13224078 |
| DOI: |
10.1371/journal.pgen.1009114.g002 |
| الاتاحة: |
https://doi.org/10.1371/journal.pgen.1009114.g002 |
| Rights: |
CC BY 4.0 |
| رقم الانضمام: |
edsbas.6408E312 |
| قاعدة البيانات: |
BASE |