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Diversity and authentication of Rubus accessions revealed by complete plastid genome and rDNA sequences

التفاصيل البيبلوغرافية
العنوان: Diversity and authentication of Rubus accessions revealed by complete plastid genome and rDNA sequences
المؤلفون: Young Sang Park, Jee Young Park, Jung Hwa Kang, Wan Hee Lee, Tae-Jin Yang
المصدر: Mitochondrial DNA. Part B. Resources, Vol 6, Iss 4, Pp 1454-1459 (2021)
بيانات النشر: Taylor & Francis Group
سنة النشر: 2021
المجموعة: Directory of Open Access Journals: DOAJ Articles
مصطلحات موضوعية: rubus longisepalus, r. hirsutus, chloroplast, rdna, phylogenetic tree, Genetics, QH426-470
الوصف: Complete plastid genome (plastome) and ribosomal DNA (rDNA) sequences of three Rubus accessions (two Rubus longisepalus and one R. hirsutus) were newly assembled using Illumina whole-genome sequences. Rubus longisepalus Nakai and R. longisepalus var. tozawai, described as different varieties, have identical plastomes and rDNA sequences. The plastomes are 155,957 bp and 156,005 bp and the 45S rDNA transcription unit sizes are 5809 bp and 5811 bp in R. longisepalus and R. hirsutus, respectively. The 5S rDNA transcription unit is an identical 121 bp in three Rubus accessions. We developed three DNA markers to authenticate R. longisepalus and R. hirsutus based on plastome diversity. Phylogenomic analysis revealed that the Rubus species classified as two clades and R. longisepalus, R. hirsutus, and R. chingii are the most closely related species in clade 1.
نوع الوثيقة: article in journal/newspaper
اللغة: English
تدمد: 2380-2359
Relation: http://dx.doi.org/10.1080/23802359.2021.1911712; https://doaj.org/toc/2380-2359; https://doaj.org/article/731cc4ead3af4327a73610febdf58f9d
DOI: 10.1080/23802359.2021.1911712
الاتاحة: https://doi.org/10.1080/23802359.2021.1911712
https://doaj.org/article/731cc4ead3af4327a73610febdf58f9d
رقم الانضمام: edsbas.53A36C64
قاعدة البيانات: BASE
الوصف
تدمد:23802359
DOI:10.1080/23802359.2021.1911712