DataSheet_1_Computer-assisted drug repurposing for thymidylate kinase drug target in monkeypox virus.docx

التفاصيل البيبلوغرافية
العنوان: DataSheet_1_Computer-assisted drug repurposing for thymidylate kinase drug target in monkeypox virus.docx
المؤلفون: Amar Ajmal, Arif Mahmood, Chandni Hayat, Mohammed Ageeli Hakami, Bader S. Alotaibi, Muhammad Umair, Ashraf N. Abdalla, Ping Li, Pei He, Abdul Wadood, Junjian Hu
سنة النشر: 2023
المجموعة: Frontiers: Figshare
مصطلحات موضوعية: Clinical Microbiology, Medical Bacteriology, Medical Infection Agents (incl. Prions), Medical Virology, monkeypox, homology modeling, molecular docking, MD simulation, drugs development
الوصف: Introduction Monkeypox is a zoonotic disease caused by brick-shaped enveloped monkeypox (Mpox) virus that belongs to the family of ancient viruses known as Poxviridae. Subsequently, the viruses have been reported in various countries. The virus is transmitted by respiratory droplets, skin lesions, and infected body fluids. The infected patients experience fluid-filled blisters, maculopapular rash, myalgia, and fever. Due to the lack of effective drugs or vaccines, there is a need to identify the most potent and effective drugs to reduce the spread of monkeypox. The current study aimed to use computational methods to quickly identify potentially effective drugs against the Mpox virus. Methods In our study, the Mpox protein thymidylate kinase (A48R) was targeted because it is a unique drug target. We screened a library of 9000 FDA-approved compounds of the DrugBank database by using various in silico approaches, such as molecular docking and molecular dynamic (MD) simulation. Results Based on docking score and interaction analysis, compounds DB12380, DB13276, DB13276, DB11740, DB14675, DB11978, DB08526, DB06573, DB15796, DB08223, DB11736, DB16250, and DB16335 were predicted as the most potent. To examine the dynamic behavior and stability of the docked complexes, three compounds—DB16335, DB15796, and DB16250 —along with the Apo state were simulated for 300ns. The results revealed that compound DB16335 revealed the best docking score (-9.57 kcal/mol) against the Mpox protein thymidylate kinase. Discussion Additionally, during the 300 ns MD simulation period, thymidylate kinase DB16335 showed great stability. Further, in vitro and in vivo study is recommended for the final predicted compounds.
نوع الوثيقة: dataset
اللغة: unknown
Relation: https://figshare.com/articles/dataset/DataSheet_1_Computer-assisted_drug_repurposing_for_thymidylate_kinase_drug_target_in_monkeypox_virus_docx/23255777
DOI: 10.3389/fcimb.2023.1159389.s001
الاتاحة: https://doi.org/10.3389/fcimb.2023.1159389.s001
https://figshare.com/articles/dataset/DataSheet_1_Computer-assisted_drug_repurposing_for_thymidylate_kinase_drug_target_in_monkeypox_virus_docx/23255777
Rights: CC BY 4.0
رقم الانضمام: edsbas.2F41CB42
قاعدة البيانات: BASE
الوصف
DOI:10.3389/fcimb.2023.1159389.s001