Nonlinear Markov Clustering by Minimum Curvilinear Sparse Similarity

التفاصيل البيبلوغرافية
العنوان: Nonlinear Markov Clustering by Minimum Curvilinear Sparse Similarity
المؤلفون: Duran, C., Acevedo, A., Ciucci, S., Muscoloni, A., Cannistraci, CV.
سنة النشر: 2019
المجموعة: Computer Science
Statistics
مصطلحات موضوعية: Computer Science - Machine Learning, Statistics - Machine Learning
الوصف: The development of algorithms for unsupervised pattern recognition by nonlinear clustering is a notable problem in data science. Markov clustering (MCL) is a renowned algorithm that simulates stochastic flows on a network of sample similarities to detect the structural organization of clusters in the data, but it has never been generalized to deal with data nonlinearity. Minimum Curvilinearity (MC) is a principle that approximates nonlinear sample distances in the high-dimensional feature space by curvilinear distances, which are computed as transversal paths over their minimum spanning tree, and then stored in a kernel. Here we propose MC-MCL, which is the first nonlinear kernel extension of MCL and exploits Minimum Curvilinearity to enhance the performance of MCL in real and synthetic data with underlying nonlinear patterns. MC-MCL is compared with baseline clustering methods, including DBSCAN, K-means and affinity propagation. We find that Minimum Curvilinearity provides a valuable framework to estimate nonlinear distances also when its kernel is applied in combination with MCL. Indeed, MC-MCL overcomes classical MCL and even baseline clustering algorithms in different nonlinear datasets.
نوع الوثيقة: Working Paper
URL الوصول: http://arxiv.org/abs/1912.12211
رقم الانضمام: edsarx.1912.12211
قاعدة البيانات: arXiv