RAMP: a bioinformatics framework for researching imaging agents through molecular pathways

التفاصيل البيبلوغرافية
العنوان: RAMP: a bioinformatics framework for researching imaging agents through molecular pathways
المؤلفون: Edward, Khokhlovich, Daniel, Wahl, Anthony, Masiello, Pierre, Parisot, Stefan, El-Ghatta, Joseph D, Szustakowski, Nanguneri, Nirmala, David S, Tuch
المصدر: Molecular imaging. 12(1)
سنة النشر: 2013
مصطلحات موضوعية: Internet, Databases, Factual, Computational Biology, Contrast Media, Humans, Proteins, Models, Biological, Software, Molecular Imaging, Signal Transduction
الوصف: Signaling pathways are the fundamental grammar of cellular communication, yet few frameworks are available to analyze molecular imaging probes in the context of signaling pathways. Such a framework would aid in the design and selection of imaging probes for measuring specific signaling pathways and, vice versa, help illuminate which pathways are being assayed by a given probe. RAMP (Researching imaging Agents through Molecular Pathways) is a bioinformatics framework for connecting signaling pathways and imaging probes using a controlled vocabulary of the imaging targets. RAMP contains signaling pathway data from MetaCore, the Kyoto Encyclopedia of Genes and Genomes, and the Gene Ontology project; imaging probe data from the Molecular Imaging and Contrast Agent Database (MICAD); and tissue protein expression data from The Human Protein Atlas. The RAMP search tool is available athttp://www.rampsearch.com. Examples are presented to demonstrate the utility of RAMP for pathway-based searches of molecular imaging probes.
تدمد: 1536-0121
URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::f0e892abe33f5209d24a1ee4fc47dfc4
https://pubmed.ncbi.nlm.nih.gov/23348786
Rights: OPEN
رقم الانضمام: edsair.pmid..........f0e892abe33f5209d24a1ee4fc47dfc4
قاعدة البيانات: OpenAIRE