Fast Gaussian Naïve Bayes for searchlight classification analysis

التفاصيل البيبلوغرافية
العنوان: Fast Gaussian Naïve Bayes for searchlight classification analysis
المؤلفون: Mitchell Valdés-Sosa, Marlis Ontivero-Ortega, Rainer Goebel, Giancarlo Valente, Agustin Lage-Castellanos
المساهمون: RS: FPN CN 2, Audition, RS: FPN CN 1, Vision
المصدر: Neuroimage, 163, 471-479. Elsevier Science
بيانات النشر: Elsevier BV, 2017.
سنة النشر: 2017
مصطلحات موضوعية: Multivariate statistics, Searchlight MVPA, Support vector machine, Computer science, Cognitive Neuroscience, Gaussian, Gaussian Naive Bayes, Inference, Machine learning, computer.software_genre, 050105 experimental psychology, Pattern Recognition, Automated, ACTIVATION, 03 medical and health sciences, Naive Bayes classifier, symbols.namesake, 0302 clinical medicine, PERMUTATION TESTS, Humans, 0501 psychology and cognitive sciences, FIELD, PRIMER, CLASSIFIERS, PITFALLS, Brain Mapping, VOXEL PATTERN-ANALYSIS, business.industry, 05 social sciences, Brain, Bayes Theorem, Pattern recognition, Magnetic Resonance Imaging, Neurology, FMRI, Multiple comparisons problem, symbols, INFERENCE, Artificial intelligence, business, computer, Classifier (UML), 030217 neurology & neurosurgery
الوصف: The searchlight technique is a variant of multivariate pattern analysis (MVPA) that examines neural activity across large sets of small regions, exhaustively covering the whole brain. This usually involves application of classifier algorithms across all searchlights, which entails large computational costs especially when testing the statistical significance of the accuracies with permutation methods. In this article, a new implementation of the Gaussian Naive Bayes classifier is presented (henceforth massive-GNB). This approach allows classification in all searchlights simultaneously, and is faster than previously published searchlight GNB implementations, as well as other more complex classifiers including support vector machines (SVM). To ensure that the gain in speed in GNB would be useful in searchlight analysis, we compared the accuracies of massive-GNB and SVM in detecting the lateral occipital complex (LOC) in an fMRI localizer experiment (26 subjects). Moreover, this region as defined in a meta-analysis of many activation studies was used as a gold standard to compare error rates for both classifiers. In individual searchlights, SVM was somewhat more accurate than massive-GNB and more selective in detecting the meta-analytic LOC. However, with multiple comparison correction at the cluster-level the two classifiers performed equivalently. Thus for cluster-level analysis, massive-GNB produces an accuracy similar to more sophisticated classifiers but with a substantial gain in speed. Massive-GNB (available as a public Matlab toolbox) could facilitate the more widespread use of searchlight analysis.
وصف الملف: application/pdf
تدمد: 1053-8119
DOI: 10.1016/j.neuroimage.2017.09.001
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f25c5a5047eda2b26d6d641a4a88478f
https://doi.org/10.1016/j.neuroimage.2017.09.001
Rights: OPEN
رقم الانضمام: edsair.doi.dedup.....f25c5a5047eda2b26d6d641a4a88478f
قاعدة البيانات: OpenAIRE
الوصف
تدمد:10538119
DOI:10.1016/j.neuroimage.2017.09.001