Chemical labeling and enrichment of nitrotyrosine-containing peptides

التفاصيل البيبلوغرافية
العنوان: Chemical labeling and enrichment of nitrotyrosine-containing peptides
المؤلفون: Nicolas Abello, Dirkje S. Postma, Rainer Bischoff, Huib A. M. Kerstjens, Begona Barroso
المساهمون: Groningen Research Institute of Pharmacy, Groningen Research Institute for Asthma and COPD (GRIAC), Medicinal Chemistry and Bioanalysis (MCB)
المصدر: Talanta, 80(4), 1503-1512. ELSEVIER SCIENCE BV
بيانات النشر: ELSEVIER SCIENCE BV, 2010.
سنة النشر: 2010
مصطلحات موضوعية: Proteomics, Spectrometry, Mass, Electrospray Ionization, 3-NITROTYROSINE, NHS-biotin, NHS-acetate, Peptide, Analytical Chemistry, chemistry.chemical_compound, MITOCHONDRIA, Animals, PROTEOMIC IDENTIFICATION, Bovine serum albumin, Shotgun proteomics, IN-VIVO, Gel electrophoresis, chemistry.chemical_classification, Nitrotyrosine, Chromatography, Nitrates, NITRIC-OXIDE, biology, Mass spectrometry, MASS-SPECTROMETRIC CHARACTERIZATION, PEROXYNITRITE, Angiotensin II, Peptide Fragments, chemistry, Biochemistry, Biotinylation, biology.protein, Tyrosine nitration, PROTEIN-TYROSINE NITRATION, Tyrosine, SKELETAL-MUSCLE, Cattle, ALZHEIMERS-DISEASE BRAIN, Peptides, Protein Processing, Post-Translational, Avidin
الوصف: Protein tyrosine nitration (PTN) is a post-translational modification of proteins associated with a number of inflammatory diseases. While PTN is rather selective (not all proteins are modified and within a protein, only certain tyrosines are subject to nitration), no consensus sequence has been identified. Since PTN is a low-abundance post-translational modification, it is necessary to enrich modified proteins and/or to detect them with high selectivity and sensitivity. Until now this has been mostly accomplished with anti-nitrotyrosine antibodies in combination with two-dimensional gel electrophoresis and mass spectrometry. We propose a chemical labeling approach designed to allow enrichment of tyrosine-nitrated peptides independent of the sequence context, which is a potential shortcoming of antibody-based approaches. In this procedure, all amines are blocked by acetylation followed by conversion of nitrotyrosine to aminotyrosine and biotinylation of aminotyrosine. The entire reaction sequence is performed in a single buffer with no need for sample cleanup or pH changes thereby reducing sample loss. Free biotin is subsequently removed with a strong cation exchanger, the labeled pepticles are enriched on an immobilized avidin column and the enriched peptides analyzed by LC-MS/MS. As a proof of concept, this method was successfully applied to the enrichment of tyrosine-nitrated angiotensin 11 in a tryptic digest of bovine serum albumin (BSA). The approach presented here is well adapted to peptide analysis, for instance in shotgun proteomics. (C) 2009 Elsevier B.V. All rights reserved.
اللغة: English
تدمد: 0039-9140
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aeeb440d5851c55da81b8b78f8afb4af
https://research.rug.nl/en/publications/5f5eaca2-c82a-4dba-9f41-90a7a9765020
Rights: CLOSED
رقم الانضمام: edsair.doi.dedup.....aeeb440d5851c55da81b8b78f8afb4af
قاعدة البيانات: OpenAIRE