Defining a canonical ligand-binding pocket in the orphan nuclear receptor Nurr1

التفاصيل البيبلوغرافية
العنوان: Defining a canonical ligand-binding pocket in the orphan nuclear receptor Nurr1
المؤلفون: Mark Rance, Edna Matta-Camacho, Paola Munoz-Tello, Patrick R. Griffin, Pankaj Kumar Giri, Jie Zheng, Ian Mitchelle S. de Vera, Travis S. Hughes, Jinsai Shang, Douglas J. Kojetin, Venkatasubramanian Dharmarajan, David Marciano
سنة النشر: 2018
مصطلحات موضوعية: 0303 health sciences, Binding Sites, Stereochemistry, Chemistry, 030302 biochemistry & molecular biology, Druggability, Nuclear magnetic resonance spectroscopy, Crystal structure, Molecular Dynamics Simulation, Ligands, Article, Orphan Nuclear Receptor Nurr1, Molecular Docking Simulation, 03 medical and health sciences, Molecular dynamics, Nuclear receptor, Structural Biology, Nuclear Receptor Subfamily 4, Group A, Member 2, Fatty Acids, Unsaturated, Humans, Hydrogen–deuterium exchange, Molecular Biology, Function (biology), 030304 developmental biology, Protein Binding
الوصف: Nuclear receptor-related 1 protein (Nurr1/NR4A2) is an orphan nuclear receptor (NR) that is considered to function without a canonical ligand-binding pocket (LBP). A crystal structure of the Nurr1 ligand-binding domain (LBD) revealed no physical space in the conserved region where other NRs with solvent accessible apo-protein LBPs bind synthetic and natural ligands. Using solution nuclear magnetic resonance spectroscopy, hydrogen/deuterium exchange mass spectrometry, and molecular dynamics simulations, we show that the putative canonical Nurr1 LBP is dynamic with high solvent accessibility, exchanges between two or more conformations on the microsecond-to-millisecond timescale, and can expand from the collapsed crystallized conformation to allow binding of unsaturated fatty acids. These findings should stimulate future studies to probe the ligandability and druggability of Nurr1 for both endogenous and synthetic ligands, which could lead to new therapeutics for Nurr1-related diseases, including Parkinson's disease and schizophrenia.
اللغة: English
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4db2b8f8f371df4d5c36ec60ee12f052
https://europepmc.org/articles/PMC6318021/
Rights: OPEN
رقم الانضمام: edsair.doi.dedup.....4db2b8f8f371df4d5c36ec60ee12f052
قاعدة البيانات: OpenAIRE