Emergence of division of labor in tissues through cell interactions and spatial cues

التفاصيل البيبلوغرافية
العنوان: Emergence of division of labor in tissues through cell interactions and spatial cues
المؤلفون: Miri Adler, Noa Moriel, Aleksandrina Goeva, Inbal Avraham-Davidi, Simon Mages, Taylor S Adams, Naftali Kaminski, Evan Z Macosko, Aviv Regev, Ruslan Medzhitov, Mor Nitzan
بيانات النشر: Zenodo, 2022.
سنة النشر: 2022
مصطلحات موضوعية: Pareto optimality, division of labor, morphogens, lateral inhibition, fibroblasts, enterocytes, self-organization, General Biochemistry, Genetics and Molecular Biology, macrophages
الوصف: Most cell types in multicellular organisms can perform multiple functions. However, not all functions can be optimally performed simultaneously by the same cells. Functions incompatible at the level of individual cells can be performed at the cell population level, where cells divide labor and specialize in different functions. Division of labor can arise due to instruction by tissue environment or through self-organization. Here, we develop a computational framework to investigate the contribution of these mechanisms to division of labor within a cell-type population. By optimizing collective cellular task performance under trade-offs, we find that distinguishable expression patterns can emerge from cell-cell interactionsvs. instructive signals. We propose a method to construct ligand-receptor networks between specialist cells and use it to infer division-of-labor mechanisms from single-cell RNA-seq and spatial transcriptomics data of stromal, epithelial, and immune cells. Our framework can be used to characterize the complexity of cell interactions within tissues.
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::48c6a5b53d6ad7797f21b199a89143cb
https://zenodo.org/record/7569404
Rights: OPEN
رقم الانضمام: edsair.doi.dedup.....48c6a5b53d6ad7797f21b199a89143cb
قاعدة البيانات: OpenAIRE