CiliaMiner: an integrated database for Ciliopathy Genes and Ciliopathies

التفاصيل البيبلوغرافية
العنوان: CiliaMiner: an integrated database for Ciliopathy Genes and Ciliopathies
المؤلفون: MERVE GÜL TURAN, Oktay Ismail Kaplan, MEHMET EMİN ORHAN, Sebiha Cevik
بيانات النشر: Cold Spring Harbor Laboratory, 2022.
سنة النشر: 2022
الوصف: Cilia are found in eukaryotic species ranging from single-celled organisms, such asChlamydomonas reinhardtii, to humans, but not in plants. The ability to respond to repellents and/or attractants, regulate cell proliferation and differentiation, and provide cellular mobility are just a few examples of how crucial cilia are to cells and organisms. Over 30 distinct rare disorders generally known as ciliopathy are caused by abnormalities or functional impairments in cilia and cilia-related compartments. Because of the complexity of ciliopathies and the rising number of ciliopathies and ciliopathy genes, a ciliopathy-oriented and up-to-date database is required. In addition, disorders not yet known as ciliopathy but have genes that produce cilia localizing proteins have yet to be classified. Here we present CiliaMiner, a manually curated ciliopathy database that includes ciliopathy lists collected from articles and databases. Analysis reveals that there are 55 distinct disorders likely related to ciliopathy, with over 4000 clinical manifestations. Based on comparative symptom analysis and subcellular localization data, diseases are classified as primary, secondary, or atypical ciliopathies. CiliaMiner provides easy access to all of these diseases and disease genes, as well as clinical features and gene-specific clinical features, as well as subcellular localization of each protein. Additionally, the orthologs of disease genes are also provided for mice, zebrafish, Xenopus, Drosophila, andC. elegans. CiliaMiner (https://kaplanlab.shinyapps.io/ciliaminer) aims to serve the cilia community with its comprehensive content, and highly enriched interactive heatmaps, and will be continually updated.
DOI: 10.1101/2022.11.28.518070
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::24093330c3084600d357f55710cf5b9e
https://doi.org/10.1101/2022.11.28.518070
رقم الانضمام: edsair.doi...........24093330c3084600d357f55710cf5b9e
قاعدة البيانات: OpenAIRE
الوصف
DOI:10.1101/2022.11.28.518070