التفاصيل البيبلوغرافية
| العنوان: |
Detection of Hydrophobic Clusters in Molecular Dynamics Protein Unfolding Simulations Using Association Rules. |
| المؤلفون: |
Oliveira, José Luís, Maojo, Víctor, Martin-Sanchez, Fernando, Pereira, António Sousa, Azevedo, Paulo J., Silva, Cândida G., Rodrigues, J. Rui, Loureiro-Ferreira, Nuno, Brito, Rui M. M. |
| المصدر: |
Biological & Medical Data Analysis (9783540296744); 2005, p329-337, 9p |
| مستخلص: |
One way of exploring protein unfolding events associated with the development of Amyloid diseases is through the use of multiple Molecular Dynamics Protein Unfolding Simulations. The analysis of the huge amount of data generated in these simulations is not a trivial task. In the present report, we demonstrate the use of Association Rules applied to the analysis of the variation profiles of the Solvent Accessible Surface Area of the 127 amino-acid residues of the protein Transthyretin, along multiple simulations. This allowed us to identify a set of 28 hydrophobic residues forming a hydrophobic cluster that might be essential in the unfolding and folding processes of Transthyretin. [ABSTRACT FROM AUTHOR] |
|
Copyright of Biological & Medical Data Analysis (9783540296744) is the property of Springer eBooks and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.) |
| قاعدة البيانات: |
Supplemental Index |