Academic Journal

Role of the hydrophobic and hydrophilic sites in the dynamic crossover of the protein-hydration water.

التفاصيل البيبلوغرافية
العنوان: Role of the hydrophobic and hydrophilic sites in the dynamic crossover of the protein-hydration water.
المؤلفون: Köhler, Mateus Henrique1 mateus.kohler@ufrgs.br, Barbosa, Rafael C.1, da Silva, Leandro B.2, Barbosa, Marcia C.1
المصدر: Physica A. Feb2017, Vol. 468, p733-739. 7p.
مصطلحات موضوعية: *PROTEIN structure, *WATER of hydration, *MOLECULAR dynamics, *HYDROGEN bonding, *DIFFUSION coefficients
مستخلص: Molecular dynamics simulations were performed to study the water structure and dynamics in the hydration shell of the globular TS-Kappa protein. The results show that for a wide range of temperatures the diffusion coefficient of water near the protein surface is lower than in bulk. A crossover in the diffusion behavior of hydration water is observed at different temperatures for hydrophilic and hydrophobic vicinities. We have found a correlation between the crossover in the hydrophilic case and the protein dynamical transition. An explanation in terms of the competition between water–water water–protein H-bond formation is provided based on H-bond network analysis. [ABSTRACT FROM AUTHOR]
قاعدة البيانات: Academic Search Index
الوصف
تدمد:03784371
DOI:10.1016/j.physa.2016.11.127