Academic Journal
Chirality affects cholesterol-oxysterol association in water, a computational study
| العنوان: | Chirality affects cholesterol-oxysterol association in water, a computational study |
|---|---|
| المؤلفون: | Michal Markiewicz, Robert Szczelina, Bozena Milanovic, Witold K. Subczynski, Marta Pasenkiewicz-Gierula |
| المصدر: | Computational and Structural Biotechnology Journal, Vol 19, Iss , Pp 4319-4335 (2021) |
| بيانات النشر: | Elsevier, 2021. |
| سنة النشر: | 2021 |
| المجموعة: | LCC:Biotechnology |
| مصطلحات موضوعية: | 7α,β-Oxycholesterol, Atherosclerosis, Sterol hydration, Dimerization, Contact area dehydration, Voronoi diagram, Biotechnology, TP248.13-248.65 |
| الوصف: | Cholesterol (Chol) is the most prevalent sterol in the animal kingdom and an indispensable component of mammalian cell membranes. Chol content in the membrane is strictly controlled, although the oxidation of phospholipids may change the relative content of membrane Chol. An excess of it results in the formation of pure Chol microdomains in the membrane. It is likely that some Chol molecules detach from the domains and self-assemble in the aqueous environment. This may promote Chol microcrystallisation, which initiates the development of gallstones and atherosclerotic plaque. In this study, the molecular dynamics, free energy perturbation, umbrella sampling and Voronoi diagram methods are used to reveal the details of self-association of Chol and its oxidised forms (oxChol), namely 7α,β-hydroxycholesterol and 7α,β-hydroperoxycholesterol, in water. In the first part of the study the interactions between a sterol monomer and water over a short and longer timescale as well as the energy of hydration of each sterol are analysed. This helps one to understand Chol-Chol and Chol-OxChol with different chirality self-association in water better, which is analysed in the second part of the study. The Voronoi diagram approach is used to determine the relative arrangement of molecules in the dimer and, most importantly, to analyse the dehydration of the contacting surfaces of the assembling molecules. Free energy calculations indicate that Chol and 7β-hydroxycholesterol associate into the most stable dimer and that Chol-Chol is the next most stable of the five dimers studied. Employing different computational methods enables us to obtain an adequate picture of Chol-sterol self-association in water, which includes dynamic, energetic and temporal aspects of the process. |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 2001-0370 |
| Relation: | http://www.sciencedirect.com/science/article/pii/S2001037021003123; https://doaj.org/toc/2001-0370 |
| DOI: | 10.1016/j.csbj.2021.07.022 |
| URL الوصول: | https://doaj.org/article/5f0c18cc73694ee98a74588b3315deb1 |
| رقم الانضمام: | edsdoj.5f0c18cc73694ee98a74588b3315deb1 |
| قاعدة البيانات: | Directory of Open Access Journals |
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