Academic Journal
From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective
| العنوان: | From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective |
|---|---|
| المؤلفون: | Ruppe, Etienne, Cherkaoui, Abdessalam, Charretier, Yannick, Girard, Myriam, Schicklin, S., Lazarevic, Vladimir, Schrenzel, Jacques |
| المصدر: | ISSN: 1198-743X ; Clinical Microbiology and Infection, vol. 26, no. 5 (2020) p. 643.e1-643.e7. |
| سنة النشر: | 2020 |
| المجموعة: | Université de Genève: Archive ouverte UNIGE |
| مصطلحات موضوعية: | info:eu-repo/classification/ddc/616, Antibiotic resistance, Antibiotic resistance genes, Antibiotic susceptibility testing, Bioinformatics, Inference, Whole-genome sequencing |
| الوصف: | Objectives: Predicting the antibiotic susceptibility phenotype from genomic data is challenging, especially for some specific antibiotics in the order Enterobacterales. Here we aimed to assess the performance of whole genomic sequencing (WGS) for predicting the antibiotic susceptibility in various Enterobacterales species using the detection of antibiotic resistance genes (ARGs), specific mutations and a knowledge-based decision algorithm. |
| نوع الوثيقة: | article in journal/newspaper |
| اللغة: | English |
| Relation: | info:eu-repo/semantics/altIdentifier/pmid/31586657; https://archive-ouverte.unige.ch/unige:140152; unige:140152 |
| الاتاحة: | https://archive-ouverte.unige.ch/unige:140152 |
| Rights: | info:eu-repo/semantics/restrictedAccess |
| رقم الانضمام: | edsbas.AD1B7C07 |
| قاعدة البيانات: | BASE |
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