Academic Journal
Identification of a Locus Controlling Seed Pigment Leaching in Cowpea [Vigna unguiculata (L.) Walp]
العنوان: | Identification of a Locus Controlling Seed Pigment Leaching in Cowpea [Vigna unguiculata (L.) Walp] |
---|---|
المؤلفون: | Christian S. Bowman, Bao Lam Huynh, Philip Roberts, Jansen R. P. Santos, Kaylee Paul, Timothy J. Close |
المصدر: | Horticulturae; Volume 9; Issue 7; Pages: 739 |
بيانات النشر: | Multidisciplinary Digital Publishing Institute |
سنة النشر: | 2023 |
المجموعة: | MDPI Open Access Publishing |
مصطلحات موضوعية: | bulked segregant analysis, cowpea, genetic analysis, pigment leaching, SNP genotyping |
جغرافية الموضوع: | agris |
الوصف: | Consumer preferences for cooking-related traits are a deciding factor in the success of new cowpea [Vignaunguiculata (L.) Walp] cultivars. Pigment leaching is an undesirable trait for both consumers and producers alike that occurs during the cooking or canning process and has been a goal for improvement efforts through breeding. This study leverages the power of bulked segregant analysis to identify a locus segregating for the pigment-leaching trait in an F2 population of blackeye seed-type cowpea. A single major locus was identified on Vu06 spanning 1.27 Mb, and SNP haplotypes were identified for low and high pigment-leaching bulks. However, further evaluation of accessions that are unrelated to the F2 population or its progenitors suggests that the trait is polygenic, such that low or high leakage is not determined solely by this locus. Parallels were drawn between cowpea and a close relative, black bean (Phaseolus vulgaris L.), to suggest that additional seed coat or cooking-related traits may also be involved in the pigment-leaching trait. |
نوع الوثيقة: | text |
وصف الملف: | application/pdf |
اللغة: | English |
Relation: | Genetics, Genomics, Breeding, and Biotechnology (G2B2); https://dx.doi.org/10.3390/horticulturae9070739 |
DOI: | 10.3390/horticulturae9070739 |
الاتاحة: | https://doi.org/10.3390/horticulturae9070739 |
Rights: | https://creativecommons.org/licenses/by/4.0/ |
رقم الانضمام: | edsbas.8E981FB3 |
قاعدة البيانات: | BASE |
ResultId |
1 |
---|---|
Header |
edsbas BASE edsbas.8E981FB3 961 3 Academic Journal academicJournal 960.976379394531 |
PLink |
https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&scope=site&db=edsbas&AN=edsbas.8E981FB3&custid=s6537998&authtype=sso |
FullText |
Array
(
[Availability] => 0
)
Array ( [0] => Array ( [Url] => https://doi.org/10.3390/horticulturae9070739# [Name] => EDS - BASE [Category] => fullText [Text] => View record in BASE [MouseOverText] => View record in BASE ) ) |
Items |
Array
(
[Name] => Title
[Label] => Title
[Group] => Ti
[Data] => Identification of a Locus Controlling Seed Pigment Leaching in Cowpea [Vigna unguiculata (L.) Walp]
)
Array ( [Name] => Author [Label] => Authors [Group] => Au [Data] => <searchLink fieldCode="AR" term="%22Christian+S%2E+Bowman%22">Christian S. Bowman</searchLink><br /><searchLink fieldCode="AR" term="%22Bao+Lam+Huynh%22">Bao Lam Huynh</searchLink><br /><searchLink fieldCode="AR" term="%22Philip+Roberts%22">Philip Roberts</searchLink><br /><searchLink fieldCode="AR" term="%22Jansen+R%2E+P%2E+Santos%22">Jansen R. P. Santos</searchLink><br /><searchLink fieldCode="AR" term="%22Kaylee+Paul%22">Kaylee Paul</searchLink><br /><searchLink fieldCode="AR" term="%22Timothy+J%2E+Close%22">Timothy J. Close</searchLink> ) Array ( [Name] => TitleSource [Label] => Source [Group] => Src [Data] => Horticulturae; Volume 9; Issue 7; Pages: 739 ) Array ( [Name] => Publisher [Label] => Publisher Information [Group] => PubInfo [Data] => Multidisciplinary Digital Publishing Institute ) Array ( [Name] => DatePubCY [Label] => Publication Year [Group] => Date [Data] => 2023 ) Array ( [Name] => Subset [Label] => Collection [Group] => HoldingsInfo [Data] => MDPI Open Access Publishing ) Array ( [Name] => Subject [Label] => Subject Terms [Group] => Su [Data] => <searchLink fieldCode="DE" term="%22bulked+segregant+analysis%22">bulked segregant analysis</searchLink><br /><searchLink fieldCode="DE" term="%22cowpea%22">cowpea</searchLink><br /><searchLink fieldCode="DE" term="%22genetic+analysis%22">genetic analysis</searchLink><br /><searchLink fieldCode="DE" term="%22pigment+leaching%22">pigment leaching</searchLink><br /><searchLink fieldCode="DE" term="%22SNP+genotyping%22">SNP genotyping</searchLink> ) Array ( [Name] => Subject [Label] => Subject Geographic [Group] => Su [Data] => <searchLink fieldCode="DE" term="%22agris%22">agris</searchLink> ) Array ( [Name] => Abstract [Label] => Description [Group] => Ab [Data] => Consumer preferences for cooking-related traits are a deciding factor in the success of new cowpea [Vignaunguiculata (L.) Walp] cultivars. Pigment leaching is an undesirable trait for both consumers and producers alike that occurs during the cooking or canning process and has been a goal for improvement efforts through breeding. This study leverages the power of bulked segregant analysis to identify a locus segregating for the pigment-leaching trait in an F2 population of blackeye seed-type cowpea. A single major locus was identified on Vu06 spanning 1.27 Mb, and SNP haplotypes were identified for low and high pigment-leaching bulks. However, further evaluation of accessions that are unrelated to the F2 population or its progenitors suggests that the trait is polygenic, such that low or high leakage is not determined solely by this locus. Parallels were drawn between cowpea and a close relative, black bean (Phaseolus vulgaris L.), to suggest that additional seed coat or cooking-related traits may also be involved in the pigment-leaching trait. ) Array ( [Name] => TypeDocument [Label] => Document Type [Group] => TypDoc [Data] => text ) Array ( [Name] => Format [Label] => File Description [Group] => SrcInfo [Data] => application/pdf ) Array ( [Name] => Language [Label] => Language [Group] => Lang [Data] => English ) Array ( [Name] => NoteTitleSource [Label] => Relation [Group] => SrcInfo [Data] => Genetics, Genomics, Breeding, and Biotechnology (G2B2); https://dx.doi.org/10.3390/horticulturae9070739 ) Array ( [Name] => DOI [Label] => DOI [Group] => ID [Data] => 10.3390/horticulturae9070739 ) Array ( [Name] => URL [Label] => Availability [Group] => URL [Data] => https://doi.org/10.3390/horticulturae9070739 ) Array ( [Name] => Copyright [Label] => Rights [Group] => Cpyrght [Data] => https://creativecommons.org/licenses/by/4.0/ ) Array ( [Name] => AN [Label] => Accession Number [Group] => ID [Data] => edsbas.8E981FB3 ) |
RecordInfo |
Array
(
[BibEntity] => Array
(
[Identifiers] => Array
(
[0] => Array
(
[Type] => doi
[Value] => 10.3390/horticulturae9070739
)
)
[Languages] => Array
(
[0] => Array
(
[Text] => English
)
)
[Subjects] => Array
(
[0] => Array
(
[SubjectFull] => agris
[Type] => general
)
[1] => Array
(
[SubjectFull] => bulked segregant analysis
[Type] => general
)
[2] => Array
(
[SubjectFull] => cowpea
[Type] => general
)
[3] => Array
(
[SubjectFull] => genetic analysis
[Type] => general
)
[4] => Array
(
[SubjectFull] => pigment leaching
[Type] => general
)
[5] => Array
(
[SubjectFull] => SNP genotyping
[Type] => general
)
)
[Titles] => Array
(
[0] => Array
(
[TitleFull] => Identification of a Locus Controlling Seed Pigment Leaching in Cowpea [Vigna unguiculata (L.) Walp]
[Type] => main
)
)
)
[BibRelationships] => Array
(
[HasContributorRelationships] => Array
(
[0] => Array
(
[PersonEntity] => Array
(
[Name] => Array
(
[NameFull] => Christian S. Bowman
)
)
)
[1] => Array
(
[PersonEntity] => Array
(
[Name] => Array
(
[NameFull] => Bao Lam Huynh
)
)
)
[2] => Array
(
[PersonEntity] => Array
(
[Name] => Array
(
[NameFull] => Philip Roberts
)
)
)
[3] => Array
(
[PersonEntity] => Array
(
[Name] => Array
(
[NameFull] => Jansen R. P. Santos
)
)
)
[4] => Array
(
[PersonEntity] => Array
(
[Name] => Array
(
[NameFull] => Kaylee Paul
)
)
)
[5] => Array
(
[PersonEntity] => Array
(
[Name] => Array
(
[NameFull] => Timothy J. Close
)
)
)
)
[IsPartOfRelationships] => Array
(
[0] => Array
(
[BibEntity] => Array
(
[Dates] => Array
(
[0] => Array
(
[D] => 01
[M] => 01
[Type] => published
[Y] => 2023
)
)
[Identifiers] => Array
(
[0] => Array
(
[Type] => issn-locals
[Value] => edsbas
)
[1] => Array
(
[Type] => issn-locals
[Value] => edsbas.oa
)
)
[Titles] => Array
(
[0] => Array
(
[TitleFull] => Horticulturae; Volume 9; Issue 7; Pages: 739
[Type] => main
)
)
)
)
)
)
)
|
IllustrationInfo |