المؤلفون: Lim, Hyun, Wang, Ye, Buzdin, Anton, Li, Xinmin

المصدر: BMC Genomics. 26(1)

مصطلحات موضوعية: 10X Visium, 10X visium HD, CosMx SMI, GeoMx DSP, Merscope, RNA sequencing, Spatial transcriptomics, Stereoseq, Xenium, Gene Expression Profiling, Transcriptome, Humans

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/85n5x6tn
https://escholarship.org/content/qt85n5x6tn/qt85n5x6tn.pdf

المؤلفون: Jinming Cheng, Xinyi Jin, Gordon K. Smyth, Yunshun Chen

المصدر: BMC Bioinformatics, Vol 26, Iss 1, Pp 1-15 (2025)

مصطلحات موضوعية: Spatial transcriptomics, Imaging-based, Cell type annotation, Reference-based annotation, Xenium, Single-cell, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2105

URL الوصول: https://doaj.org/article/b80071a2f7c34f1b960eb329d3e33e53

المؤلفون: Quanlei Liu, Chunhao Shen, Yang Dai, Ting Tang, Changkai Hou, Hongyi Yang, Yihe Wang, Jinkun Xu, Yongchang Lu, Yunming Wang, Yongzhi Shan, Penghu Wei, Guoguang Zhao

المصدر: Biomarker Research, Vol 12, Iss 1, Pp 1-19 (2024)

مصطلحات موضوعية: Temporal lobe epilepsy, Single-cell RNA sequencing, Single-nucleus RNA sequencing, Xenium-based spatial transcriptomics, Therapeutics. Pharmacology, RM1-950

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2050-7771

URL الوصول: https://doaj.org/article/f43d3a21a3bb48b8b83c1a93dcccf0d5

المؤلفون: M. Langseth, Christoffer, Kukanja, Petra, A. Rubio Rodríguez-Kirby, Leslie, Zheng, Chao, Agirre, Eneritz, Raman, Amitha, Yokota, Chika, Avenel, Christophe, Tiklová, Katarína, Ortlieb Guerreiro-Cacais, Andre, Olsson, Tomas, M. Hilscher, Markus, Nilsson, Mats, Castelo-Branco, Gonçalo

مصطلحات موضوعية: in situ sequencing, spatial transcriptomics, multiple sclerosis, experimental autoimmune encephalomyelitis, neurodegenerative disease, 10x genomics, xenium

Relation: https://doi.org/10.5281/zenodo.8037424; https://doi.org/10.5281/zenodo.8037425; oai:zenodo.org:8037425

الاتاحة: https://doi.org/10.5281/zenodo.8037425

المؤلفون: Curry, Amber R., Ooi, Lezanne, Matosin, Natalie

المصدر: Scopus Harvesting Series

مصطلحات موضوعية: cosmx, geomx, omics, psychiatry, spatial, spatial proteomics, spatial transcriptomics, Stress, visium, xenium

Relation: https://ro.uow.edu.au/test2021/11869; https://doi.org/10.1080/10253890.2024.2351394

الاتاحة: https://ro.uow.edu.au/test2021/11869
https://doi.org/10.1080/10253890.2024.2351394

المؤلفون: Tan, Kai, Yu, Wenbao

مصطلحات موضوعية: Xenium, Co-culture, Neuroblastoma

Relation: https://doi.org/10.5281/zenodo.14261273; https://doi.org/10.5281/zenodo.14261274; oai:zenodo.org:14261274

الاتاحة: https://doi.org/10.5281/zenodo.14261274

المؤلفون: Bortolomeazzi, Michele

مصطلحات موضوعية: Xenium, Spatial-omics, OMERO, Vitessce

Relation: https://doi.org/10.6019/S-BIAD1093; https://doi.org/10.1101/2024.04.03.586404; https://doi.org/10.5281/zenodo.13832664; https://doi.org/10.5281/zenodo.13832665; oai:zenodo.org:13832665

الاتاحة: https://doi.org/10.5281/zenodo.13832665

المؤلفون: Marco Salas, Sergio

المساهمون: Marco Salas, Sergio

مصطلحات موضوعية: xenium, spatial transcriptomics, mouse brain, brain

Relation: https://doi.org/10.5281/zenodo.11120306; https://doi.org/10.5281/zenodo.11120307; oai:zenodo.org:11120307

الاتاحة: https://doi.org/10.5281/zenodo.11120307

المؤلفون: Bhuva, Dharmesh D, Tan, Chin Wee, Marceaux, Claire, Pickering, Marie, Salim, Agus, Chen, Jinjin, Kharbanda, Malvika, Jin, Xinyi, Liu, Ning, Feher, Kristen, Putri, Givanna, Tilley, Wayne D, Hickey, Theresa E, Marie-Liesse Asselin-Labat, Phipson, Belinda, Davis, Melissa J

مصطلحات موضوعية: spatial transcriptomics, mouse brain, non-small cell lung cancer, Xenium, CosMx, STOmics, breast cancer, IDC, ILC

Relation: https://doi.org/10.5281/zenodo.7959786; https://doi.org/10.5281/zenodo.10516814; oai:zenodo.org:10516814

الاتاحة: https://doi.org/10.5281/zenodo.10516814

المؤلفون: Margarita Kapustina

مصطلحات موضوعية: Neurogenetics, scRNA-seq pipelines, Xenium, spatial transcriptomics technology

Relation: https://figshare.com/articles/software/ATN_Analysis_Pipelines/25091150

الاتاحة: https://doi.org/10.6084/m9.figshare.25091150.v1
https://figshare.com/articles/software/ATN_Analysis_Pipelines/25091150

المؤلفون: Hao Wu, Ruqiang Zhang, Michael J. Scanlon

مصطلحات موضوعية: FFPE, Maize, Embryo, transition stage, coleoptilar stage, Leaf1 stage, Xenium

الاتاحة: https://doi.org/10.57760/sciencedb.16071

المؤلفون: UNM HSC Communications

المصدر: HSC Connects Newsletters

مصطلحات موضوعية: UNM Health Science Center, Douglas Ziedonis, Gastroenterology, Hepatology, Genomic Xenium, Halloween, HSLIC, BioVenture

وصف الملف: application/pdf

Relation: https://digitalrepository.unm.edu/connects/14; https://digitalrepository.unm.edu/context/connects/article/1013/viewcontent/HSC_Connects___Oct_6_2023.pdf

الاتاحة: https://digitalrepository.unm.edu/connects/14
https://digitalrepository.unm.edu/context/connects/article/1013/viewcontent/HSC_Connects___Oct_6_2023.pdf

المؤلفون: Dharmesh D Bhuva, Chin Wee Tan, Claire Marceaux, Jinjin Chen, Malvika Kharbanda, Xinyi Jin, Ning Liu, Kristen Feher, Givanna Putri, Marie-Liesse Asselin-Labat, Belinda Phipson, Melissa J Davis

مصطلحات موضوعية: spatial transcriptomics, mouse brain, non-small cell lung cancer, Xenium, CosMx, STOmics

Relation: https://doi.org/10.5281/zenodo.7959786; https://doi.org/10.5281/zenodo.7959787; oai:zenodo.org:7959787

الاتاحة: https://doi.org/10.5281/zenodo.7959787

المؤلفون: Denis Bienroth, Hieu Nim, Natalie Charitakis, Mirana Ramialison, Dillon Wong

مصطلحات موضوعية: Bioinformatic methods development, Genomics and transcriptomics, Spatial Transcriptomics, Visualisation, Spatial data, Visium, Xenium, Tomo-Seq, MERFISH, VR

Relation: https://figshare.com/articles/software/VR-Omics_Exploration_of_Spatial_Transcriptomics_data_in_3D/24503611

الاتاحة: https://doi.org/10.6084/m9.figshare.24503611.v2
https://figshare.com/articles/software/VR-Omics_Exploration_of_Spatial_Transcriptomics_data_in_3D/24503611

المؤلفون: Mirana Ramialison, Denis Bienroth, Natalie Charitakis, Sabrina Jaeger-Honz, Dimitar Garkov, Hieu Nim, Falk Schreiber, Karsten Klein

مصطلحات موضوعية: Genomics and transcriptomics, Spatial transcriptomics, visualisation, Spatial data, Visium, Xenium, STOmics, TOMO-Seq, MERFISH, VR, ARDC Data Retention Project

Relation: https://figshare.com/articles/software/Spatially_Resolved_Transcriptomics_Exploration_in_3D_desktop_and_Virtual_Environments_with_VR-Omics_-_Application/20220312

الاتاحة: https://doi.org/10.26180/20220312.v4
https://figshare.com/articles/software/Spatially_Resolved_Transcriptomics_Exploration_in_3D_desktop_and_Virtual_Environments_with_VR-Omics_-_Application/20220312

المؤلفون: Denis Bienroth, Natalie Charitakis, Hieu Nim, Mirana Ramialison, Sabrina Jaeger-Honz, Dimitar Garkov, Karsten Klein, Falk Schreiber

مصطلحات موضوعية: Spatial data and applications, Spatial transcriptomics, Visium, Xenium, STOmics, TOMO-Seq, MERFISH, Scanpy, Squidpy

Relation: https://figshare.com/articles/software/Spatially_Resolved_Transcriptomics_Exploration_in_3D_Desktop_and_Virtual_Reality_Environments_with_VR-Omics_-_Python_executables/22207903

الاتاحة: https://doi.org/10.26180/22207903.v1
https://figshare.com/articles/software/Spatially_Resolved_Transcriptomics_Exploration_in_3D_Desktop_and_Virtual_Reality_Environments_with_VR-Omics_-_Python_executables/22207903

المؤلفون: Mirana Ramialison, Denis Bienroth, Natalie Charitakis, Hieu Nim, Karsten Klein, Falk Schreiber, Sabrina Jaeger-Honz, Dimitar Garkov

مصطلحات موضوعية: Spatial data and applications, Spatial transcriptomics, Visium, Xenium, TOMO-Seq, STOmics, MERFISH

Relation: https://figshare.com/articles/dataset/Spatially_Resolved_Transcriptomics_Exploration_in_3D_Desktop_and_Virtual_Reality_Environments_with_VR-Omics_-_Test_data/22207579

الاتاحة: https://doi.org/10.26180/22207579.v1
https://figshare.com/articles/dataset/Spatially_Resolved_Transcriptomics_Exploration_in_3D_Desktop_and_Virtual_Reality_Environments_with_VR-Omics_-_Test_data/22207579

المؤلفون: Umek, Nejc

المساهمون: Umek, Nejc, Meznarič, Marija, Šink, Žiga, Blagotinšek Cokan, Kaja, Prosenc Zmrzljak, Uršula, Horvat, Simon

مصطلحات موضوعية: Spatial transcriptomic, Xenium platform, Muscle fibre, Skeletal muscle

Relation: https://doi.org/10.5281/zenodo.14173370; https://doi.org/10.5281/zenodo.14173371; oai:zenodo.org:14173371

الاتاحة: https://doi.org/10.5281/zenodo.14173371
https://doi.org/10.21203/rs.3.rs-5012685/v1

المؤلفون: Pascual Reguant, Anna

المساهمون: Morabito, Samuel, García-Gómez, Pedro, Heyn, Holger, Valiente, Manuel

مصطلحات موضوعية: spatial transcriptomics, xenium, micrometastasis, human brain tumor

Relation: https://doi.org/10.5281/zenodo.13737538; https://doi.org/10.5281/zenodo.13736215; https://doi.org/10.5281/zenodo.13736216; oai:zenodo.org:13736216

الاتاحة: https://doi.org/10.5281/zenodo.13736216

المؤلفون: Gary A. P. Gibson, Lucian Fusu

مصطلحات موضوعية: Eupelmus, Insecta, Arthropoda, Animalia, Biodiversity, Eupelmus xenium, Hymenoptera, Eupelmidae, Taxonomy

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::405241e0f11973e7813d93c635752676