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1Academic Journal
المؤلفون: van de Kooij, Bert, van der Wal, Fenna J, Rother, Magdalena B, Wiegant, Wouter W, Creixell, Pau, Stout, Merula, Joughin, Brian A, Vornberger, Julia, Altmeyer, Matthias, van Vugt, Marcel A T M, Yaffe, Michael B, van Attikum, Haico
المصدر: van de Kooij, Bert; van der Wal, Fenna J; Rother, Magdalena B; Wiegant, Wouter W; Creixell, Pau; Stout, Merula; Joughin, Brian A; Vornberger, Julia; Altmeyer, Matthias; van Vugt, Marcel A T M; Yaffe, Michael B; van Attikum, Haico (2024). The Fanconi anemia core complex promotes CtIP-dependent end resection to drive homologous recombination at DNA double-strand breaks. Nature Communications, 15(1):7076.
مصطلحات موضوعية: Department of Molecular Mechanisms of Disease, 570 Life sciences, biology
وصف الملف: application/pdf
Relation: https://www.zora.uzh.ch/id/eprint/265116/1/ZORA265116.pdf; info:pmid/39152113; urn:issn:2041-1723
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2Academic Journal
المؤلفون: van de Kooij, Bert, Schreuder, Anne, Pavani, Raphael, Garzero, Veronica, Uruci, Sidrit, Wendel, Tiemen J, van Hoeck, Arne, San Martin Alonso, Marta, Everts, Marieke, Koerse, Dana, Callen, Elsa, Boom, Jasper, Mei, Hailiang, Cuppen, Edwin, Luijsterburg, Martijn S, van Vugt, Marcel A T M, Nussenzweig, André, van Attikum, Haico, Noordermeer, Sylvie M
المصدر: van de Kooij , B , Schreuder , A , Pavani , R , Garzero , V , Uruci , S , Wendel , T J , van Hoeck , A , San Martin Alonso , M , Everts , M , Koerse , D , Callen , E , Boom , J , Mei , H , Cuppen , E , Luijsterburg , M S , van Vugt , M A T M , Nussenzweig , A , van Attikum , H & Noordermeer , S M 2024 , ' EXO1 protects BRCA1-deficient cells against toxic DNA lesions ....
مصطلحات موضوعية: BRCA1, cancer, DNA double-strand break repair, EXO1, homologous recombination, single-strand annealing, synthetic lethality
وصف الملف: application/pdf
الاتاحة: https://hdl.handle.net/11370/e9423cf1-5140-47f7-9df9-1d931dfc78af
https://research.rug.nl/en/publications/e9423cf1-5140-47f7-9df9-1d931dfc78af
https://doi.org/10.1016/j.molcel.2023.12.039
https://pure.rug.nl/ws/files/925926137/1-s2.0-S1097276523010857-main_1_.pdf
http://www.scopus.com/inward/record.url?scp=85184765240&partnerID=8YFLogxK -
3Academic Journal
المؤلفون: Audrey, Anastasia, Kok, Yannick P, Yu, Shibo, de Haan, Lauren, van de Kooij, Bert, van den Tempel, Nathalie, Chen, Mengting, de Boer, H Rudolf, van der Vegt, Bert, van Vugt, Marcel A T M
المصدر: Audrey , A , Kok , Y P , Yu , S , de Haan , L , van de Kooij , B , van den Tempel , N , Chen , M , de Boer , H R , van der Vegt , B & van Vugt , M A T M 2024 , ' RAD52-dependent mitotic DNA synthesis is required for genome stability in Cyclin E1-overexpressing cells ' , Cell reports , vol. 43 , no. 4 , 114116 . https://doi.org/10.1016/j.celrep.2024.114116
مصطلحات موضوعية: Humans, Cyclin E/metabolism, Genomic Instability, Rad52 DNA Repair and Recombination Protein/metabolism, Mitosis, Oncogene Proteins/metabolism, DNA Replication, Cell Line, Tumor, DNA Damage, DNA/metabolism, Breast Neoplasms/genetics
وصف الملف: application/pdf
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4Academic Journal
المؤلفون: Johnson, Jared L, Yaron, Tomer M, Huntsman, Emily M, Kerelsky, Alexander, Song, Junho, Regev, Amit, Lin, Ting-Yu, Liberatore, Katarina, Cizin, Daniel M, Cohen, Benjamin M, Vasan, Neil, Ma, Yilun, Krismer, Konstantin, Robles, Jaylissa Torres, van de Kooij, Bert, van Vlimmeren, Anne E, Andrée-Busch, Nicole, Käufer, Norbert F, Dorovkov, Maxim V, Ryazanov, Alexey G, Takagi, Yuichiro, Kastenhuber, Edward R, Goncalves, Marcus D, Hopkins, Benjamin D, Elemento, Olivier, Taatjes, Dylan J, Maucuer, Alexandre, Yamashita, Akio, Degterev, Alexei, Uduman, Mohamed, Landry, Sean D, Cossentino, Ian, Linding, Rune, Blenis, John, Hornbeck, Peter V, Turk, Benjamin E, Yaffe, Michael B, Cantley, Lewis C
المصدر: Johnson , J L , Yaron , T M , Huntsman , E M , Kerelsky , A , Song , J , Regev , A , Lin , T-Y , Liberatore , K , Cizin , D M , Cohen , B M , Vasan , N , Ma , Y , Krismer , K , Robles , J T , van de Kooij , B , van Vlimmeren , A E , Andrée-Busch , N , Käufer , N F , Dorovkov , M V , Ryazanov , A G , Takagi , Y , Kastenhuber , ....
مصطلحات موضوعية: Humans, Phosphorylation, Protein Serine-Threonine Kinases/metabolism, Serine/metabolism, Substrate Specificity, Threonine/metabolism, Proteome/chemistry, Datasets as Topic, Phosphoproteins/chemistry, Cell Line, Phosphoserine/metabolism, Phosphothreonine/metabolism
وصف الملف: application/pdf
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5Academic Journal
المؤلفون: Stok, Colin, Tsaridou, Stavroula, van den Tempel, Nathalie, Everts, Marieke, Wierenga, Elles, Bakker, Femke J, Kok, Yannick, Alves, Inês Teles, Jae, Lucas T, Raas, Maximilian W D, Huis In 't Veld, Pim J, de Boer, H Rudolf, Bhattacharya, Arkajyoti, Karanika, Eleftheria, Warner, Harry, Chen, Mengting, van de Kooij, Bert, Dessapt, Julien, ter Morsche, Lars, Perepelkina, Polina, Fradet-Turcotte, Amelie, Guryev, Victor, Tromer, Eelco C, Chan, Kok-Lung, Fehrmann, Rudolf S N, van Vugt, Marcel A T M
المصدر: Stok , C , Tsaridou , S , van den Tempel , N , Everts , M , Wierenga , E , Bakker , F J , Kok , Y , Alves , I T , Jae , L T , Raas , M W D , Huis In 't Veld , P J , de Boer , H R , Bhattacharya , A , Karanika , E , Warner , H , Chen , M , van de Kooij , B , Dessapt , J , ter Morsche , L , Perepelkina , P , Fradet-Turcotte , A ....
وصف الملف: application/pdf
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6Academic Journal
المؤلفون: van de Kooij, Bert, de Vries, Evert, Rooswinkel, Rogier W., Janssen, George M.C., Kok, Frédérique K., van Veelen, Peter A., Borst, Jannie
المصدر: van de Kooij , B , de Vries , E , Rooswinkel , R W , Janssen , G M C , Kok , F K , van Veelen , P A & Borst , J 2023 , ' N-terminal acetylation can stabilize proteins independent of their ubiquitination ' , Scientific Reports , vol. 13 , no. 1 , 5333 . https://doi.org/10.1038/s41598-023-32380-3
وصف الملف: application/pdf
الاتاحة: https://hdl.handle.net/11370/ac59115e-17af-484c-bb04-a26b0fb54f35
https://research.rug.nl/en/publications/ac59115e-17af-484c-bb04-a26b0fb54f35
https://doi.org/10.1038/s41598-023-32380-3
https://pure.rug.nl/ws/files/697625789/N-terminal_acetylation_can_stabilize_proteins_independent_of_their_ubiquitination.pdf -
7Academic Journal
المساهمون: Massachusetts Institute of Technology. Department of Biology
المصدر: Nature
وصف الملف: application/pdf
Relation: Nature Communications; https://hdl.handle.net/1721.1/147029; van de Kooij, Bert, Kruswick, Alex, van Attikum, Haico and Yaffe, Michael B. 2022. "Multi-pathway DNA-repair reporters reveal competition between end-joining, single-strand annealing and homologous recombination at Cas9-induced DNA double-strand breaks." Nature Communications, 13 (1).
الاتاحة: https://hdl.handle.net/1721.1/147029
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8Academic Journal
المؤلفون: Johnson, Jared L., Yaron, Tomer M., Huntsman, Emily M., Kerelsky, Alexander, Song, Junho, Regev, Amit, Lin, Ting-Yu, Liberatore, Katarina, Cizin, Daniel M., Cohen, Benjamin M., Vasan, Neil, Ma, Yilun, Krismer, Konstantin, Torres Robles, Jaylissa, van de Kooij, Bert, van Vlimmeren, Anne E., Andrée-Busch, Nicole, Käufer, Norbert F., Dorovkov, Maxim V., Ryazanov, Alexey G., Takagi, Yuichiro, Kastenhuber, Edward R., Goncalves, Marcus D., Hopkins, Benjamin D., Elemento, Olivier, Taatjes, Dylan J., Maucuer, Alexandre, Yamashita, Akio, Degterev, Alexei, Uduman, Mohamed, Lu, Jingyi, Landry, Sean D., Zhang, Bin, Cossentino, Ian, Linding, Rune, Blenis, John, Hornbeck, Peter V., Turk, Benjamin E., Yaffe, Michael B., Cantley, Lewis C.
المساهمون: Biochemistry and Molecular Biology, School of Medicine
المصدر: PMC
مصطلحات موضوعية: Kinases, Cellular signalling networks, Bioinformatics, Phosphorylation
وصف الملف: application/pdf
Relation: Nature; Johnson JL, Yaron TM, Huntsman EM, et al. An atlas of substrate specificities for the human serine/threonine kinome. Nature. 2023;613(7945):759-766. doi:10.1038/s41586-022-05575-3; https://hdl.handle.net/1805/36481
الاتاحة: https://hdl.handle.net/1805/36481
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9Report
المؤلفون: van de Kooij, Bert, van der Wal, Fenna J, Rother, Magdalena B, Creixell, Pau, Stout, Merula, Wiegant, Wouter, Joughin, Brian A, Vornberger, Julia, van Vugt, Marcel A T M, Altmeyer, Matthias, Yaffe, Michael B, van Attikum, Haico
المصدر: van de Kooij , B , van der Wal , F J , Rother , M B , Creixell , P , Stout , M , Wiegant , W , Joughin , B A , Vornberger , J , van Vugt , M A T M , Altmeyer , M , Yaffe , M B & van Attikum , H 2023 ' The Fanconi anemia core complex promotes CtIP-dependent end-resection to drive homologous recombination at DNA double-strand breaks ' bioRxiv , BioRxiv . https://doi.org/10.1101/2023.09.05.556391
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10Electronic Resource
المؤلفون: CMM Groep Snippert, CMM Groep Van Mil, van de Kooij, Bert, Schreuder, Anne, Pavani, Raphael, Garzero, Veronica, Uruci, Sidrit, Wendel, Tiemen J., van Hoeck, Arne, San Martin Alonso, Marta, Everts, Marieke, Koerse, Dana, Callen, Elsa, Boom, Jasper, Mei, Hailiang, Cuppen, Edwin, Luijsterburg, Martijn S., van Vugt, Marcel A.T.M., Nussenzweig, André, van Attikum, Haico, Noordermeer, Sylvie M.
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11Academic Journal
المصدر: Nature Communications ; volume 13, issue 1 ; ISSN 2041-1723
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12Academic Journal
المؤلفون: van de Kooij, Bert, van Attikum, Haico
المساهمون: H2020 European Research Council, Nederlandse Organisatie voor Wetenschappelijk Onderzoek, KWF Kankerbestrijding
المصدر: Frontiers in Genetics ; volume 12 ; ISSN 1664-8021
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13Academic Journal
المؤلفون: Van de Kooij, Bert, Creixell Morera, Pau, Van Vlimmeren, Anne Elise, Joughin, Brian Alan, Yaffe, Michael B
المساهمون: Massachusetts Institute of Technology. Department of Biology, Massachusetts Institute of Technology. Department of Biological Engineering, Koch Institute for Integrative Cancer Research at MIT
المصدر: eLife
وصف الملف: application/pdf
Relation: https://dx.doi.org/10.7554/ELIFE.44635; eLife; https://hdl.handle.net/1721.1/125507; Van de Kooij, Bert et al. “Comprehensive substrate specificity profiling of the human Nek kinome reveals unexpected signaling outputs.” eLife 8 (2019): e44635 © 2019 The Author(s)
الاتاحة: https://hdl.handle.net/1721.1/125507
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14Electronic Resource
المؤلفون: Theoretical Biology and Bioinformatics, Sub Bioinformatics, Stok, Colin, Tsaridou, Stavroula, van den Tempel, Nathalie, Everts, Marieke, Wierenga, Elles, Bakker, Femke J, Kok, Yannick, Alves, Inês Teles, Jae, Lucas T, Raas, Maximilian W D, Huis In 't Veld, Pim J, de Boer, H Rudolf, Bhattacharya, Arkajyoti, Karanika, Eleftheria, Warner, Harry, Chen, Mengting, van de Kooij, Bert, Dessapt, Julien, Ter Morsche, Lars, Perepelkina, Polina, Fradet-Turcotte, Amelie, Guryev, Victor, Tromer, Eelco C, Chan, Kok-Lung, Fehrmann, Rudolf S N, van Vugt, Marcel A T M
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15Electronic Resource
المؤلفون: Massachusetts Institute of Technology. Department of Biology, van de Kooij, Bert, Kruswick, Alex, van Attikum, Haico, Yaffe, Michael B
المصدر: Nature
مصطلحات الفهرس: Article, http://purl.org/eprint/type/JournalArticle
URL:
https://hdl.handle.net/1721.1/147029
10.1038/s41467-022-32743-w
Nature Communications -
16Academic Journal
المؤلفون: van de Kooij, Bert, Creixell, Pau, van Vlimmeren, Anne, Joughin, Brian A, Miller, Chad J, Haider, Nasir, Simpson, Craig D, Linding, Rune, Stambolic, Vuk, Turk, Benjamin E, Yaffe, Michael B
المساهمون: Ludwig Institute for Cancer Research, Dutch Cancer Society, National Cancer Institute, European Union Seventh Framework Programme, National Institutes of Health, The Charles and Marjorie Holloway Foundation, National Institute of Environmental Health Sciences, MIT Center for Precision Cancer Medicine
المصدر: eLife ; volume 8 ; ISSN 2050-084X
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17Academic Journal
المؤلفون: Miller, Chad J., Lou, Hua Jane, Simpson, Craig, van de Kooij, Bert, Ha, Byung Hak, Fisher, Oriana S., Pirman, Natasha L., Boggon, Titus J., Rinehart, Jesse, Yaffe, Michael B., Linding, Rune, Turk, Benjamin E.
المساهمون: Hunter, Tony
المصدر: PLOS Biology ; volume 17, issue 3, page e2006540 ; ISSN 1545-7885
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18Academic Journal
المؤلفون: Patterson, Jesse C., Joughin, Brian A., van de Kooij, Bert, Lim, Daniel C., Lauffenburger, Douglas A., Yaffe, Michael B.
المساهمون: National Institute of Health, DoD, Charles and Marjorie Holloway Foundation, MIT, American Cancer Society, Koch Institute, National Cancer Institute, Center for Environmental Health
المصدر: Cell Systems ; volume 8, issue 2, page 163-167.e2 ; ISSN 2405-4712
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19Academic Journal
المؤلفون: Leestemaker, Yves, de Jong, Annemieke, Witting, Katharina F, Penning, Renske, Schuurman, Karianne, Rodenko, Boris, Zaal, Esther A, van de Kooij, Bert, Laufer, Stefan, Heck, Albert J R, Borst, Jannie, Scheper, Wiep, Berkers, Celia R, Ovaa, Huib
المساهمون: Biomolecular Mass Spectrometry and Proteomics, Afd Biomol.Mass Spect. and Proteomics, Sub Biomol.Mass Spectrometry & Proteom.
مصطلحات موضوعية: Taverne
وصف الملف: application/pdf
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20Academic Journal
المؤلفون: Ichim, Gabriel, Lopez, Jonathan, Ahmed, Shafiq U., Muthalagu, Nathiya, Giampazolias, Evangelos, Delgado, M. Eugenia, Haller, Martina, Riley, Joel S., Mason, Susan M., Athineos, Dimitris, Parsons, Melissa J., van de Kooij, Bert, Bouchier-Hayes, Lisa, Chalmers, Anthony J., Rooswinkel, Rogier W., Oberst, Andrew, Blyth, Karen, Rehm, Markus, Murphy, Daniel J., Tait, Stephen W.G.
المصدر: Molecular Cell ; volume 58, issue 5, page 900 ; ISSN 1097-2765
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