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1
المؤلفون: Musat, Niculina, Werner, Ursula, Knittel, Katrin, Kolb, Steffen, Dodenhof, Tanja, van Beusekom, Justus, de Beer, Dirk, Dubilier, Nicole, Amann, Rudolf
المصدر: Supplement to: Musat, Niculina; Werner, Ursula; Knittel, Katrin; Kolb, Steffen; Dodenhof, Tanja; van Beusekom, Justus; de Beer, Dirk; Dubilier, Nicole; Amann, Rudolf (2006): Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea. Systematic and Applied Microbiology, 29(4), 333-348, https://doi.org/10.1016/j.syapm.2005.12.006
مصطلحات موضوعية: Bacteria, targeted with EUB338 l oligonucleotides FISH-probe, Core, Cytophaga-Flavobacterium cluster, targeted with CF319a oligonucleotide FISH-probe, Date/Time of event, DEPTH, sediment/rock, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, Epifluorescence microscopy after DAPI staining, Event label, Fluorescence in situ hybridization (FISH), Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, Latitude of event, Longitude of event, Planctomycetales, targeted with PLA886 oligonucleotide FISH-probe, Prokaryotes, number of cell, WaddenSea_Sylt-03-2000, WaddenSea_Sylt-06-1999, WaddenSea_Sylt-07-2000, WaddenSea_Sylt-10-1999, Wadden Sea, North Sea, Germany
جغرافية الموضوع: LATITUDE: 55.033330 * LONGITUDE: 8.433330 * DATE/TIME START: 1999-06-22T00:00:00 * DATE/TIME END: 2000-07-05T00:00:00 * MINIMUM DEPTH, sediment/rock: 0.5 m * MAXIMUM DEPTH, sediment/rock: 11.5 m
وصف الملف: text/tab-separated-values, 362 data points
Relation: Oligonucleotide probes and formamide concentration used in Musat et al., 2006 (URI: https://store.pangaea.de/Publications/Musat-etal_2006/Oligonucleotide-probes_Musat-etal_2006.pdf); https://doi.pangaea.de/10.1594/PANGAEA.858490; https://doi.org/10.1594/PANGAEA.858490
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2
المؤلفون: Knittel, Katrin, Boetius, Antje, Lemke, Andreas, Eilers, Heike, Lochte, Karin, Pfannkuche, Olaf, Linke, Peter, Amann, Rudolf
المصدر: Supplement to: Knittel, Katrin; Boetius, Antje; Lemke, Andreas; Eilers, Heike; Lochte, Karin; Pfannkuche, Olaf; Linke, Peter; Amann, Rudolf (2003): Activity, distribution, and diversity of sulfate reducers and other bacteria in sediments above gas hydrate (Cascadia Margin, Oregon). Geomicrobiology Journal, 20(4), 269-294, https://doi.org/10.1080/01490450303896
مصطلحات موضوعية: Anaerobic methanotrophic archaea-2/DSS, cells in aggregates, targeted with ANME-2-538 and DSS658 oligonucleotide FISH-probe, Anaerobic methanotrophic archaea-2/DSS aggregates, Anaerobic methanotrophic archaea-2/DSS single cell, Anaerobic methanotrophic archaea-2/DSS total cells, Archaea, targed with ARCH915 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Cascadia Margin, Cytophaga-Flavobacterium cluster, targeted with CF319a oligonucleotide FISH-probe, Date/Time of event, DEPTH, sediment/rock, Desulfobacterium spp., targeted with 221 oligonucleotides FISH-probe, Desulfobulbus spp., targeted with 660 oligonucleotides FISH-probe, Desulforhopalus spp., targeted with DSR651 oligonucleotides FISH-probe, Desulfotalea spp., targeted with Sval428 oligonucleotides FISH-probe, Desulfovibrio spp., targeted with DSV698 oligonucleotides FISH-probe, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, Event label, Fluorescence in situ hybridization (FISH)
جغرافية الموضوع: MEDIAN LATITUDE: 44.569588 * MEDIAN LONGITUDE: -125.146493 * SOUTH-BOUND LATITUDE: 44.568330 * WEST-BOUND LONGITUDE: -125.147750 * NORTH-BOUND LATITUDE: 44.570300 * EAST-BOUND LONGITUDE: -125.139670 * DATE/TIME START: 1999-08-06T02:23:00 * DATE/TIME END: 2000-08-01T05:00:00 * MINIMUM DEPTH, sediment/rock: 0.005 m * MAXIMUM DEPTH, sediment/rock: 0.145 m
وصف الملف: text/tab-separated-values, 665 data points
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3
المؤلفون: Ravenschlag, Katrin, Sahm, Kerstin, Knoblauch, Christian, Jørgensen, Bo Barker, Amann, Rudolf I
المصدر: Supplement to: Ravenschlag, Katrin; Sahm, Kerstin; Knoblauch, Christian; Jørgensen, Bo Barker; Amann, Rudolf I (2000): Community Structure, Cellular rRNA Content, and Activity of Sulfate-Reducing Bacteria in Marine Arctic Sediments. Applied and Environmental Microbiology, 66(8), 3592-3602, https://doi.org/10.1128/AEM.66.8.3592-3602.2000
مصطلحات موضوعية: Bacteria, sulfate reducing, targed with EUB338(I-III) oligonucleotide FISH-probe, Core, Date/Time of event, DEPTH, sediment/rock, Desulfobacterium spp., targeted with 221 oligonucleotides FISH-probe, Desulfobacter spp., targeted with DSB985 oligonucleotides FISH-probe, Desulfobulbus spp., targeted with 660 oligonucleotides FISH-probe, Desulforhopalus spp., targeted with DSR651 oligonucleotides FISH-probe, Desulfotalea spp., targeted with Sval428 oligonucleotides FISH-probe, Desulfovibrio spp., targeted with DSV698 oligonucleotides FISH-probe, Desulfuromonas spp., targeted with DRM432 oligonucleotides FISH-probe, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, Epifluorescence microscopy after DAPI staining, Event label, Fluorescence in situ hybridization (FISH), Latitude of event, Longitude of event, Prokaryotes, abundance as single cells
جغرافية الموضوع: LATITUDE: 79.926380 * LONGITUDE: 11.135830 * DATE/TIME START: 1998-07-28T00:00:00 * DATE/TIME END: 1998-07-28T00:00:00 * MINIMUM DEPTH, sediment/rock: 0.0025 m * MAXIMUM DEPTH, sediment/rock: 0.0950 m
وصف الملف: text/tab-separated-values, 337 data points
Relation: Oligonucleotide probes and formamide concentration used in Ravenschlag et al., 2000 (URI: https://store.pangaea.de/Publications/Ravenschlag-etal_2000/Oligonucleotide-probes_Ravenschlag-etal_2000.pdf); https://doi.pangaea.de/10.1594/PANGAEA.858334; https://doi.org/10.1594/PANGAEA.858334
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4
المؤلفون: Ruff, S Emil, Ramette, Alban, Boetius, Antje
مصطلحات موضوعية: Anaerobic methanotrophic archaea-3, targeted with ANME-3-1249 oligonucleotide FISH-probe, Archaea, targed with ARCH915 oligonucleotide FISH-probe, ARK-XIX/3b, ARK-XXIV/2, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), Date/Time of event, Depth, bottom/max, sediment/rock, top/min, Desulfobulbus, targeted with DBB660 oligonucleotide FISH-probe, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, ESONET, European Seafloor Observatory Network, Event label, GC, Gravity corer, Habitat, Håkon Mosby Mud Volcano, HERMIONE, Hotspot Ecosystem Research and Mans Impact On European Seas, Latitude of event, Longitude of event, LOOME
جغرافية الموضوع: MEDIAN LATITUDE: 72.003918 * MEDIAN LONGITUDE: 14.727823 * SOUTH-BOUND LATITUDE: 72.000300 * WEST-BOUND LONGITUDE: 14.702167 * NORTH-BOUND LATITUDE: 72.006660 * EAST-BOUND LONGITUDE: 14.747660 * DATE/TIME START: 2003-07-02T00:00:00 * DATE/TIME END: 2010-10-04T13:01:00 * MINIMUM DEPTH, sediment/rock: 0.01 m * MAXIMUM DEPTH, sediment/rock: 4.65 m
وصف الملف: text/tab-separated-values, 290 data points
Relation: https://doi.org/10.1594/PANGAEA.861266; Ruff, S Emil; Felden, Janine; Gruber-Vodicka, Harald R; Marcon, Yann; Knittel, Katrin; Ramette, Alban; Boetius, Antje (2018): In situ development of a methanotrophic microbiome in deep-sea sediments. The ISME Journal, https://doi.org/10.1038/s41396-018-0263-1; Oligonucleotide probes and formamide concentration used in Ruff et al., 2016 (URI: https://store.pangaea.de/Publications/Ruff-etal_2016/Oligonucleotide-probes_Ruff-etal_2016.pdf); https://doi.pangaea.de/10.1594/PANGAEA.861872; https://doi.org/10.1594/PANGAEA.861872
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5
المؤلفون: Grünke, Stefanie, Boetius, Antje
مصطلحات موضوعية: Acrobacter spp., targeted with ARC94 oligonucleotide FISH-probe, Amon Mud Volcano, Anaerobic methanotrophic archaea-1, targeted with ANME-1-350 oligonucleotide FISH-probe, Anaerobic methanotrophic archaea-2a, targeted with ANME-2a-647 oligonucleotide FISH-probe, Anaerobic methanotrophic archaea-3, targeted with ANME-3-1249 oligonucleotide FISH-probe, Archaea, targed with ARCH915 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, BIONIL, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), DEPTH, sediment/rock, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, Event label, Fluorescence determination of DAPI stain, HERMES, Hotspot Ecosystem Research on the Margins of European Seas, Latitude of event, Longitude of event, M70/2a, M70/2a_760_PUC-40
جغرافية الموضوع: MEDIAN LATITUDE: 32.423223 * MEDIAN LONGITUDE: 31.255873 * SOUTH-BOUND LATITUDE: 32.367690 * WEST-BOUND LONGITUDE: 30.352170 * NORTH-BOUND LATITUDE: 32.533150 * EAST-BOUND LONGITUDE: 31.711030 * DATE/TIME START: 2006-10-25T01:01:00 * DATE/TIME END: 2006-10-29T21:39:00 * MINIMUM DEPTH, sediment/rock: 0.005 m * MAXIMUM DEPTH, sediment/rock: 0.150 m
Time: 760-40, 765-49, 773-38
وصف الملف: text/tab-separated-values, 143 data points
Relation: https://doi.org/10.1594/PANGAEA.810017; Grünke, Stefanie; Felden, Janine; Lichtschlag, Anna; Girnth, Anne-Christin; de Beer, Dirk; Wenzhöfer, Frank; Boetius, Antje (2011): Niche differentiation among mat-forming, sulfide-oxidizing bacteria at cold seeps of the Nile Deep Sea Fan (Eastern Mediterranean Sea). Geobiology, 9(4), 330-348, https://doi.org/10.1111/j.1472-4669.2011.00281.x; https://doi.pangaea.de/10.1594/PANGAEA.818003; https://doi.org/10.1594/PANGAEA.818003
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6
المؤلفون: Wegener, Gunter, Shovitri, M, Knittel, Katrin, Niemann, Hans, Hovland, Martin, Boetius, Antje
مصطلحات موضوعية: AL267, AL267_1274-MUC, Alkor (1990), Anaerobic methanotrophic archaea-1, targeted with ANME-1-350 oligonucleotide FISH-probe, Anaerobic methanotrophic archaea-2a, targeted with ANME-2a-647 oligonucleotide FISH-probe, targeted with ANME-2c-622 oligonucleotide FISH-probe, Anaerobic methanotrophic archaea-3, targeted with ANME-3-1249 oligonucleotide FISH-probe, Archaea, Area/locality, Bacteria, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), Date/Time of event, Depth, bottom/max, sediment/rock, top/min, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, Event label, HE208, HE208/766, HE208/771, Heincke, Kvitebjorn, Latitude of event, Longitude of event, MUC
جغرافية الموضوع: MEDIAN LATITUDE: 59.693430 * MEDIAN LONGITUDE: 2.563894 * SOUTH-BOUND LATITUDE: 56.733330 * WEST-BOUND LONGITUDE: 2.242584 * NORTH-BOUND LATITUDE: 61.174335 * EAST-BOUND LONGITUDE: 3.205550 * DATE/TIME START: 2004-05-17T08:40:20 * DATE/TIME END: 2005-09-26T03:59:00 * MINIMUM DEPTH, sediment/rock: 0.015 m * MAXIMUM DEPTH, sediment/rock: 0.250 m
وصف الملف: text/tab-separated-values, 161 data points
Relation: https://doi.org/10.1594/PANGAEA.860780; Wegener, Gunter; Shovitri, M; Knittel, Katrin; Niemann, Hans; Hovland, Martin; Boetius, Antje (2008): Biogeochemical processes and microbial diversity of the Gullfaks and Tommeliten methane seeps (Northern North Sea). Biogeosciences, 5(4), 1127-1144, https://doi.org/10.5194/bg-5-1127-2008; https://doi.pangaea.de/10.1594/PANGAEA.859961; https://doi.org/10.1594/PANGAEA.859961
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7
المصدر: Supplement to: Schreiber, Lars; Holler, Thomas; Knittel, Katrin; Meyerdierks, Anke; Amann, Rudolf (2010): Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade. Environmental Microbiology, 12(8), 2327-2340, https://doi.org/10.1111/j.1462-2920.2010.02275.x
مصطلحات موضوعية: Anaerobic methanotrophic archaea-2 single cell, targeted with ANME-2-538 oligonucleotide FISH-probe, BIONIL, Bush Hill, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), Date/Time of event, Desulfusarcina/Desulfococcus, targeted with DSS658 oligonucleotide FISH-probe, Desulfusarcina/Desulfococcus single cell, Epifluorescence microscopy after DAPI staining, Event label, HE208, HE208/771, Heincke, Isis Mud Volcano, Kvitebjorn, Latitude of event, Location, Longitude of event, M70/2b, M70/2b_812_PUC-8, Meteor (1986), Multicorer with television, OTEGA II, Prokaryotes, abundance as single cells, PUC, Push corer
Time: 156, 812-8
وصف الملف: text/tab-separated-values, 30 data points
Relation: Knittel, Katrin; Lösekann, Tina; Boetius, Antje; Kort, Renate; Amann, Rudolf (2016): Relative abundance of anaerobic methanotrophic archaea in bacterial mat Cascadia margin off Oregon [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.860405; Wegener, Gunter; Shovitri, M; Knittel, Katrin; Niemann, Hans; Hovland, Martin; Boetius, Antje (2016): Microbial community in sediment of Gullfaks and Tommeliten methane seeps in the Northern North Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.859961; https://doi.pangaea.de/10.1594/PANGAEA.860523