المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/journal_contribution/One-hundred_ns_all-atom_molecular_dynamics_simulations_show_that_stabilization_of_R77_side_chain_provided_by_the_R-clamp_in_the_wild-type_complex_could_be_reproduced_by_Met_Ile_and_Trp_in_the_A83M_Y120I_double_mutant_/17017374

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.s004

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/journal_contribution/Contour_plots_illustrating_cell_surface_CD4_expression_and_HIV-1_Nef_transduction_GFP_levels_/17017362

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.s001

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/journal_contribution/Contour_plots_illustrating_cell_surface_CD4_expression_and_SIVcpz_Nef_transduction_GFP_levels_/17017371

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.s003

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/journal_contribution/Role_of_the_R-clamp_in_Nef-mediated_enhancement_of_virion_infectivity_/17017383

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.s006

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/journal_contribution/Role_of_R-clamp_residues_83_120_in_intracellular_Hck-Nef_complex_formation_/17017377

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.s005

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/Hck-activating_potential_of_selected_HIV-1_Nefs_/17017392

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g001

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/Fig_2_-/17017398

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g002

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/The_arginine_clamp_/17017404

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g003

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/Role_of_residue_83_120_pairing_in_the_HIV-1_N_Nef_R-clamp_/17017410

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g004

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/Comprehensive_testing_of_R-clamp_residue_pairing_rules_by_mutagenesis_of_SF2-Nef_/17017425

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g006

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/Putative_cross-species_transmission_and_evolution_of_R-clamp_categories_/17017443

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g009

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/R-clamp_architecture_of_SIVcpz_Nef_proteins_/17017416

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g005

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/figure/Role_of_the_R-clamp_in_activation_of_in_vitro_differentiated_macrophages_by_Nef_/17017437

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.g008

المؤلفون: Zhe Zhao (157204), Riku Fagerlund (11707983), Helena Tossavainen (198209), Kristina Hopfensperger (824159), Rishikesh Lotke (9549926), Smitha Srinivasachar Badarinarayan (11707986), Frank Kirchhoff (94157), Perttu Permi (150487), Kei Sato (493447), Daniel Sauter (109619), Kalle Saksela (153572)

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Developmental Biology, Infectious Diseases, Virology, simian immunodeficiency viruses, side chain compositions, highly conserved arginine, eastern chimpanzee subspecies, cellular protein kinases, aforementioned two classes, tyrosine kinase hck, combining structural analyses, nef residues 83, accessory protein nef, several distinct r, functional evolutionary intermediate, div >< p, ), clamp design principles, 1 nef activates, sh3 domain binding, sh3 domain, sh3 binding, structural basis, kinase deregulation

Relation: https://figshare.com/articles/dataset/R-clamp_residue_combinations_in_the_HIV-1-like_superfamily_of_Nef_proteins_/17017446

الاتاحة: https://doi.org/10.1371/journal.ppat.1009728.t001

المؤلفون: Evan Mills, Kevin Truong

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://apel.ibbme.utoronto.ca/apel/publications/protein_localization_prot_sci_EM_KT.pdf.

مصطلحات موضوعية: synthetic biology, calmodulin signaling, SH3 binding domains, translocation, protein engineering

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.332.4753; http://apel.ibbme.utoronto.ca/apel/publications/protein_localization_prot_sci_EM_KT.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.332.4753
http://apel.ibbme.utoronto.ca/apel/publications/protein_localization_prot_sci_EM_KT.pdf

المساهمون: Doc Gyun Jeong, Wyun Kon Park, Seyeon Park, Park, Wyun Kon

مصطلحات موضوعية: Actins/metabolism, Animals, Axons/drug effects, Axons/metabolism, Cells, Cultured, Extracellular Signal-Regulated MAP Kinases/metabolism, Ganglia, Spinal/cytology, Spinal/metabolism, Humans, Mitogen-Activated Protein Kinases/metabolism, Nerve Tissue Proteins/pharmacology, Nerve Tissue Proteins/physiology, Neurons/cytology, Neurons/drug effects, Neurons/metabolism, Phosphorylation, Rats, Sprague-Dawley, Signal Transduction/drug effects, Signal Transduction/physiology, src Homology Domains/physiology, src-Family Kinases/metabolism, artemin, axonal growth, src-family kinase, ERK, SH3 binding partner

وصف الملف: 210~220

Relation: CELL BIOCHEMISTRY AND FUNCTION; J00475; OAK-2008-00976; https://ir.ymlib.yonsei.ac.kr/handle/22282913/107096; T200800823; CELL BIOCHEMISTRY AND FUNCTION, Vol.26(2) : 210-220, 2008

الاتاحة: https://ir.ymlib.yonsei.ac.kr/handle/22282913/107096
https://doi.org/10.1002/cbf.1436
http://onlinelibrary.wiley.com/doi/10.1002/cbf.1436/abstract

المؤلفون: Imke M. Willers, José M. Cuezva

المصدر: Biochimica et biophysica acta. 1807(6)

مصطلحات موضوعية: ATPase, Cell, Biophysics, Mitochondrion, medicine.disease_cause, Biochemistry, Models, Biological, Neoplasms, medicine, Animals, Humans, Cancer, biology, ATP synthase, Cell Biology, Cell cycle, Mitochondrial Proton-Translocating ATPases, H+-ATP synthase, Cell biology, Mitochondria, Ras-GAP SH3 binding protein 1 (G3BP1), medicine.anatomical_structure, Phenotype, Anaerobic glycolysis, Cancer cell, biology.protein, Aerobic glycolysis, ATPase Inhibitory Factor 1 (IF1), Carcinogenesis, Energy Metabolism, Protein Processing, Post-Translational, Metabolic Networks and Pathways

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::81ccb3fa9fbc5596b60cfd95fc0027f4
https://pubmed.ncbi.nlm.nih.gov/21035425

المؤلفون: J. I. Sznajder M. D

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://ajplung.physiology.org/content/early/2002/01/04/ajplung.00178.2001.full.pdf.

مصطلحات موضوعية: Alveolar Type II, DA, dopamine, EGF, epidermal growth factor, SH3b-P, SH3 binding peptide

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.327.5034; http://ajplung.physiology.org/content/early/2002/01/04/ajplung.00178.2001.full.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.327.5034
http://ajplung.physiology.org/content/early/2002/01/04/ajplung.00178.2001.full.pdf

المؤلفون: Lee, Kar Kei

المساهمون: School of Chemical and Biomedical Engineering, William Chen Wei Ning

مصطلحات موضوعية: HBX genotype D, SH3 binding domain

Relation: Lee, K. K. (2008, March). Identification of functional motifs in HBX genotype D and their roles in cellular processes. Presented at Discover URECA @ NTU poster exhibition and competition, Nanyang Technological University, Singapore.; http://hdl.handle.net/10220/9061

الاتاحة: http://hdl.handle.net/10220/9061