المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/journal_contribution/Supplementary_information_/21727726

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.s001

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/dataset/Training_set_for_the_hard_benchmark_/21727729

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.s002

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/dataset/Testing_set_for_the_hard_benchmark_/21727732

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.s003

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/dataset/Testing_set_for_the_inverted_benchmark_/21727738

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.s005

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/dataset/Training_set_for_the_inverted_benchmark_/21727735

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.s004

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/Assignment_of_beads_on_the_four_standard_nucleotides_and_strength_of_base-base_interactions_in_the_different_models_/21727741

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g001

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/miR-125a_2D_MFE_structure_mutation_boxes_hard_benchmark_sets_and_3D_structure_/21727744

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g002

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/RMSIP_and_NCO_between_normal_modes_and_principal_components_from_NMR_ensembles_/21727753

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g005

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/Pearson_correlation_coefficient_between_predicted_and_experimental_B-factors_for_ENCoM_and_ANM_/21727747

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g003

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/Cumulative_overlap_between_normal_modes_and_conformational_changes_from_X-ray_crystallography_experiments_/21727750

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g004

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/Performance_of_LASSO_linear_regression_on_the_inverted_benchmark_/21727759

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g007

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/Performance_of_LASSO_linear_regression_on_the_hard_benchmark_/21727756

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g006

المؤلفون: Olivier Mailhot (11238207), Vincent Frappier (410086), François Major (28507), Rafael J. Najmanovich (517280)

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://figshare.com/articles/figure/Coefficients_of_LASSO_regression_models_/21727762

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g008

المؤلفون: Olivier Mailhot, Vincent Frappier, François Major, Rafael J. Najmanovich

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://doi.org/10.1371/journal.pcbi.1010777.g008

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g008

المؤلفون: Olivier Mailhot, Vincent Frappier, François Major, Rafael J. Najmanovich

مصطلحات موضوعية: Biophysics, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, multivariate linear regression, capture signal beyond, better predictive power, tested model able, anisotropic network model, using dynamical information, throughput mutational data, dynamical features identified, anm performs better, popular nma models, 125a maturation point, 125a maturation dataset, grained nma model, similar performance profile, human microrna mir, 3d structural dynamics, training set contains, widely used coarse, model unique, testing set, available data, anm ), sequence information, sequence features

Relation: https://doi.org/10.1371/journal.pcbi.1010777.g005

الاتاحة: https://doi.org/10.1371/journal.pcbi.1010777.g005