المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/journal_contribution/Commands_index_/21704357

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.s001

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/journal_contribution/Set_categories_for_updown-top-ranking_/21704360

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.s002

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/journal_contribution/Gofasta_tests_/21704366

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.s004

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/journal_contribution/Impact_of_sequence_quality_on_catchment_accuracy_/21704363

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.s003

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/journal_contribution/Supplementary_author_list_/21704369

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.s005

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/figure/Fig_1_-/21704372

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g001

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/figure/Schema_of_civet_catchment_and_tree_building_pipeline_/21704375

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g002

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/figure/Fig_3_-/21704378

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g003

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/figure/Sample_of_figures_from_a_civet_report_demonstrating_its_use_for_community_surveillance_in_the_UK_/21704381

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g004

المؤلفون: Áine O’Toole (11063432), Verity Hill (11063429), Ben Jackson (128953), Rebecca Dewar (11460607), Nikita Sahadeo (828243), Rachel Colquhoun (14241383), Stefan Rooke (14241386), J. T. McCrone (14241389), Kate Duggan (3722185), Martin P. McHugh (14241392), Samuel M. Nicholls (14241395), Radoslaw Poplawski (11063417), David Aanensen (14241398), Matt Holden (14241401), Tom Connor (736617), Nick Loman (497049), Ian Goodfellow (193063), Christine V. F. Carrington (14241404), Kate Templeton (368206), Andrew Rambaut (15183)

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://figshare.com/articles/figure/Schema_of_a_national_level_surveillance_report_generated_using_civet_for_Trinidad_and_Tobago_/21704384

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g005

المؤلفون: Áine O’Toole, Verity Hill, Ben Jackson, Rebecca Dewar, Nikita Sahadeo, Rachel Colquhoun, Stefan Rooke, J. T. McCrone, Kate Duggan, Martin P. McHugh, Samuel M. Nicholls, Radoslaw Poplawski, David Aanensen, Matt Holden, Tom Connor, Nick Loman, Ian Goodfellow, Christine V. F. Carrington, Kate Templeton, Andrew Rambaut

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://doi.org/10.1371/journal.pgph.0000704.g005

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g005

المؤلفون: Áine O’Toole, Verity Hill, Ben Jackson, Rebecca Dewar, Nikita Sahadeo, Rachel Colquhoun, Stefan Rooke, J. T. McCrone, Kate Duggan, Martin P. McHugh, Samuel M. Nicholls, Radoslaw Poplawski, David Aanensen, Matt Holden, Tom Connor, Nick Loman, Ian Goodfellow, Christine V. F. Carrington, Kate Templeton, Andrew Rambaut

مصطلحات موضوعية: Microbiology, Biotechnology, Evolutionary Biology, Cancer, Science Policy, Infectious Diseases, Biological Sciences not elsewhere classified, virus epidemiology tool, often outbreak investigations, informed outbreak investigations, different &# 8217, catchments &# 8217, virus diversity circulating, clinical outbreak investigation, interpreting local outbreaks, appropriate context within, local context, cluster investigation, background diversity, international context, %22">xlink ">, routinely summarise, routine analyses, producing reports, placing sequences, place sequences, latest dataset, helped researchers, global dataset, distributable report

Relation: https://doi.org/10.1371/journal.pgph.0000704.g003

الاتاحة: https://doi.org/10.1371/journal.pgph.0000704.g003