المؤلفون: Katherine D. Soto, Manuel Alcalde-Rico, Juan A. Ugalde, Jorge Olivares-Pacheco, Valeria Quiroz, Bárbara Brito, Lina M. Rivas, José M. Munita, Patricia C. García, Aniela Wozniak

المصدر: Frontiers in Cellular and Infection Microbiology, Vol 14 (2024)

مصطلحات موضوعية: Pseudomonas aeruginosa, blaPER-3 gene, PER-3 extended-spectrum β-lactamase, ceftazidime/avibactam resistance, mutations conferring CZA resistance, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcimb.2024.1410834/full; https://doaj.org/toc/2235-2988

URL الوصول: https://doaj.org/article/cdbe0503f82e46ed9cc3b3d01d33d589

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Inclusivity_in_global_research_checklist_/25129492

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s001
https://figshare.com/articles/journal_contribution/Inclusivity_in_global_research_checklist_/25129492

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Primer_sequences_for_the_6-plex_microhaplotype_panel_and_the_10-plex_drug_resistance_panel_/25129507

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s006
https://figshare.com/articles/journal_contribution/Primer_sequences_for_the_6-plex_microhaplotype_panel_and_the_10-plex_drug_resistance_panel_/25129507

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Antimalarial_drug_resistance_markers_and_nucleotide_positions_of_known_mutations_/25129510

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s007
https://figshare.com/articles/journal_contribution/Antimalarial_drug_resistance_markers_and_nucleotide_positions_of_known_mutations_/25129510

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Thermal_cycling_conditions_of_6-plex_microhaplotype_panel_and_10-plex_drug_resistance_panel_/25129513

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s008
https://figshare.com/articles/journal_contribution/Thermal_cycling_conditions_of_6-plex_microhaplotype_panel_and_10-plex_drug_resistance_panel_/25129513

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Full_list_of_laboratory_equipment_for_the_pilot_study_in_Zanzibar_/25129519

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s010
https://figshare.com/articles/journal_contribution/Full_list_of_laboratory_equipment_for_the_pilot_study_in_Zanzibar_/25129519

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Individual_nanopore_sequencing_run_characteristics_/25129528

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s013
https://figshare.com/articles/journal_contribution/Individual_nanopore_sequencing_run_characteristics_/25129528

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/Annual_number_of_malaria_cases_reported_through_the_individual_case-based_Malaria_Case_Notification_system_by_island_and_year_/25129516

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s009
https://figshare.com/articles/journal_contribution/Annual_number_of_malaria_cases_reported_through_the_individual_case-based_Malaria_Case_Notification_system_by_island_and_year_/25129516

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/_i_P_i_i_falciparum_i_highly_polymorphic_microhaplotypes_targeted_by_the_6-plex_amplicon_panel_/25129525

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s012
https://figshare.com/articles/journal_contribution/_i_P_i_i_falciparum_i_highly_polymorphic_microhaplotypes_targeted_by_the_6-plex_amplicon_panel_/25129525

المؤلفون: Aurel Holzschuh, Anita Lerch, Bakar S. Fakih, Safia Mohammed Aliy, Mohamed Haji Ali, Mohamed Ali Ali, Daniel J. Bruzzese, Joshua Yukich, Manuel W. Hetzel, Cristian Koepfli

مصطلحات موضوعية: Medicine, Genetics, Molecular Biology, Biotechnology, Ecology, Cancer, Hematology, Infectious Diseases, Virology, Computational Biology, Biological Sciences not elsewhere classified, routinely collected rdts, mutations conferring anti, including minority clones, identified current challenges, malarial drug resistance, limited sequencing infrastructure, endemic areas prevents, artemisinin partial resistance, div >< p, rapid diagnostic test, high microhaplotype diversity, implementing nanopore sequencing, accelerate malaria control, plasmodium falciparum <, endemic sites using, end genomic surveillance, polyclonal malaria infections, nanopore sequencing, malaria control

Relation: https://figshare.com/articles/journal_contribution/_i_P_i_i_falciparum_i_antimalarial_drug_resistance_genes_targeted_by_the_10-plex_amplicon_panel_/25129522

الاتاحة: https://doi.org/10.1371/journal.pgph.0002743.s011
https://figshare.com/articles/journal_contribution/_i_P_i_i_falciparum_i_antimalarial_drug_resistance_genes_targeted_by_the_10-plex_amplicon_panel_/25129522

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Additional_notes_on_the_model_and_parameter_estimation_/16582205

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s001

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Average_run_time_of_the_MCEM_step_y-axis_logarithmic_scale_using_various_sampling_schemes_for_different_poset_sizes_x-axis_logarithmic_scale_/16582235

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s011

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Assessment_of_the_backward-AR_sampling_/16582223

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s007

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Understanding_the_source_of_bias_in_estimating_rate_parameters_/16582232

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s010

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Additional_details_on_the_assessment_of_importance_sampling_schemes_on_simulated_data_/16582208

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s002

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Assessment_of_the_Hamming_i_k_i_-neighborhood_sampling_/16582217

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s005

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Assessment_of_the_forward_sampling_/16582211

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s003

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Assessment_of_the_forward-pool_sampling_/16582214

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s004

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Assessment_of_parameter_estimation_for_various_numbers_of_mutations_error_rates_and_posets_/16582229

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s009

المؤلفون: Susana Posada-Céspedes (11402519), Gert Van Zyl (11402522), Hesam Montazeri (451798), Jack Kuipers (1390278), Soo-Yon Rhee (42412), Roger Kouyos (178908), Huldrych F. Günthard (9623497), Niko Beerenwinkel (54419)

مصطلحات موضوعية: Medicine, Genetics, Pharmacology, Evolutionary Biology, Cancer, Infectious Diseases, Plant Biology, Virology, results also suggest, find strong support, comparing mutational pathways, significantly different sharing, 1 infections regardless, inferring mutational networks, inferred mutational networks, abundant subtype worldwide, sectional genotype data, resistance mutations accumulate, mutations conferring resistance, subtype b genotypes, protease inhibitor lopinavir, mutational networks, lopinavir resistance, resistance mutations, subtype b, sectional cohort, data set, 1 subtypes, accumulating mutations, different hiv

Relation: https://figshare.com/articles/journal_contribution/Assessment_of_the_Bernoulli_sampling_/16582220

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008363.s006