المؤلفون: Shishir Singh (14334351), Mateo Murillo-León (14334354), Niklas Sebastian Endres (14334357), Ailan Farid Arenas Soto (14334360), Jorge Enrique Gómez-Marín (7857968), Florence Melbert (14334363), Thirumala-Devi Kanneganti (62745), Masahiro Yamamoto (39398), Claudia Campos (8137581), Jonathan Charles Howard (14334366), Gregory Alan Taylor (14334369), Tobias Steinfeldt (154465)

مصطلحات موضوعية: Biochemistry, Microbiology, Immunology, Cancer, Infectious Diseases, Environmental Sciences not elsewhere classified, Physical Sciences not elsewhere classified, parasitophorous vacuolar membrane, inhibits homodimer formation, direct interaction partners, pvm integrity rescues, polymorphic rhoptry proteins, zoonotic apicomplexan parasite, irg resistance system, toxoplasma gondii <, specific parasite effector, irg proteins, specific inactivation, pvm ), gondii <, irg protein, yet unknown, vivo <, vitro <, study identifies, small rodents, related gtpases, overall reduction, one third, mediated clearance

Relation: https://figshare.com/articles/journal_contribution/_i_T_i_i_gondii_i_strains_used_in_this_study_/21824043

الاتاحة: https://doi.org/10.1371/journal.ppat.1011003.s017

المؤلفون: Shishir Singh (14334351), Mateo Murillo-León (14334354), Niklas Sebastian Endres (14334357), Ailan Farid Arenas Soto (14334360), Jorge Enrique Gómez-Marín (7857968), Florence Melbert (14334363), Thirumala-Devi Kanneganti (62745), Masahiro Yamamoto (39398), Claudia Campos (8137581), Jonathan Charles Howard (14334366), Gregory Alan Taylor (14334369), Tobias Steinfeldt (154465)

مصطلحات موضوعية: Biochemistry, Microbiology, Immunology, Cancer, Infectious Diseases, Environmental Sciences not elsewhere classified, Physical Sciences not elsewhere classified, parasitophorous vacuolar membrane, inhibits homodimer formation, direct interaction partners, pvm integrity rescues, polymorphic rhoptry proteins, zoonotic apicomplexan parasite, irg resistance system, toxoplasma gondii <, specific parasite effector, irg proteins, specific inactivation, pvm ), gondii <, irg protein, yet unknown, vivo <, vitro <, study identifies, small rodents, related gtpases, overall reduction, one third, mediated clearance

Relation: https://figshare.com/articles/journal_contribution/Reagents_and_resources_/21824040

الاتاحة: https://doi.org/10.1371/journal.ppat.1011003.s016

المؤلفون: Shishir Singh (14334351), Mateo Murillo-León (14334354), Niklas Sebastian Endres (14334357), Ailan Farid Arenas Soto (14334360), Jorge Enrique Gómez-Marín (7857968), Florence Melbert (14334363), Thirumala-Devi Kanneganti (62745), Masahiro Yamamoto (39398), Claudia Campos (8137581), Jonathan Charles Howard (14334366), Gregory Alan Taylor (14334369), Tobias Steinfeldt (154465)

مصطلحات موضوعية: Biochemistry, Microbiology, Immunology, Cancer, Infectious Diseases, Environmental Sciences not elsewhere classified, Physical Sciences not elsewhere classified, parasitophorous vacuolar membrane, inhibits homodimer formation, direct interaction partners, pvm integrity rescues, polymorphic rhoptry proteins, zoonotic apicomplexan parasite, irg resistance system, toxoplasma gondii <, specific parasite effector, irg proteins, specific inactivation, pvm ), gondii <, irg protein, yet unknown, vivo <, vitro <, study identifies, small rodents, related gtpases, overall reduction, one third, mediated clearance

Relation: https://figshare.com/articles/journal_contribution/Oligonucleotides_and_primers_used_in_this_study_/21824049

الاتاحة: https://doi.org/10.1371/journal.ppat.1011003.s019

المؤلفون: Shishir Singh (14334351), Mateo Murillo-León (14334354), Niklas Sebastian Endres (14334357), Ailan Farid Arenas Soto (14334360), Jorge Enrique Gómez-Marín (7857968), Florence Melbert (14334363), Thirumala-Devi Kanneganti (62745), Masahiro Yamamoto (39398), Claudia Campos (8137581), Jonathan Charles Howard (14334366), Gregory Alan Taylor (14334369), Tobias Steinfeldt (154465)

مصطلحات موضوعية: Biochemistry, Microbiology, Immunology, Cancer, Infectious Diseases, Environmental Sciences not elsewhere classified, Physical Sciences not elsewhere classified, parasitophorous vacuolar membrane, inhibits homodimer formation, direct interaction partners, pvm integrity rescues, polymorphic rhoptry proteins, zoonotic apicomplexan parasite, irg resistance system, toxoplasma gondii <, specific parasite effector, irg proteins, specific inactivation, pvm ), gondii <, irg protein, yet unknown, vivo <, vitro <, study identifies, small rodents, related gtpases, overall reduction, one third, mediated clearance

Relation: https://figshare.com/articles/journal_contribution/Immunoreagents_used_in_this_study_/21824052

الاتاحة: https://doi.org/10.1371/journal.ppat.1011003.s020

المؤلفون: Shishir Singh (14334351), Mateo Murillo-León (14334354), Niklas Sebastian Endres (14334357), Ailan Farid Arenas Soto (14334360), Jorge Enrique Gómez-Marín (7857968), Florence Melbert (14334363), Thirumala-Devi Kanneganti (62745), Masahiro Yamamoto (39398), Claudia Campos (8137581), Jonathan Charles Howard (14334366), Gregory Alan Taylor (14334369), Tobias Steinfeldt (154465)

مصطلحات موضوعية: Biochemistry, Microbiology, Immunology, Cancer, Infectious Diseases, Environmental Sciences not elsewhere classified, Physical Sciences not elsewhere classified, parasitophorous vacuolar membrane, inhibits homodimer formation, direct interaction partners, pvm integrity rescues, polymorphic rhoptry proteins, zoonotic apicomplexan parasite, irg resistance system, toxoplasma gondii <, specific parasite effector, irg proteins, specific inactivation, pvm ), gondii <, irg protein, yet unknown, vivo <, vitro <, study identifies, small rodents, related gtpases, overall reduction, one third, mediated clearance

Relation: https://figshare.com/articles/journal_contribution/Plasmids_and_constructs_used_in_this_study_/21824046

الاتاحة: https://doi.org/10.1371/journal.ppat.1011003.s018

المؤلفون: Maryam Al-Khannaq, Jonathan Lytton

المصدر: International Journal of Molecular Sciences; Volume 24; Issue 1; Pages: 598

مصطلحات موضوعية: potassium-dependent sodium-calcium exchange, Ca 2+ transport, subcellular location, trafficking, expression, genetics, post-translational modification, allosteric regulation, phosphorylation, palmitoylation, interaction partners

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Biochemistry; https://dx.doi.org/10.3390/ijms24010598

الاتاحة: https://doi.org/10.3390/ijms24010598

المؤلفون: Dawitz, Hannah, Schäfer, Jacob, Schaart, Judith M., Magits, Wout, Brzezinski, Peter, Ott, Martin

المصدر: Frontiers in Physiology. 10

مصطلحات موضوعية: Rcf1, Rcf2, respiratory supercomplex, cytochrome c oxidase, bc(1) complex, interaction partners, Saccharomyces cerevisiae

وصف الملف: print

URL الوصول: https://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-178815
https://doi.org/10.3389/fphys.2019.01555

المؤلفون: Na Wu (240778), Lingyi Jiao (11210830), Matthias Bütikofer (11210833), Zhihui Zeng (4422352), Renato Zenobi (248557)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Molecular Biology, Physiology, Pharmacology, Biotechnology, Immunology, Developmental Biology, Cancer, Inorganic Chemistry, Space Science, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, sample deposition methods, membrane protein receptors, 5 μ M, interaction partners, BSA, high-mass MALDI-MS analysis, interleukin 1 receptor, high-mass analytes, PPI, interleukin 2 receptor, sandwich deposition method

Relation: https://figshare.com/articles/journal_contribution/High-Mass_Matrix-Assisted_Laser_Desorption_Ionization_Mass_Spectrometry_for_Absolute_Quantitation_of_Noncovalent_Protein_Protein_Binding_Interactions/15084190

الاتاحة: https://doi.org/10.1021/acs.analchem.1c02126.s001

المؤلفون: ByeongJin Cho (11243845), Jaejun Choi (11243848), RyeongHyeon Kim (11243851), Jean Nyoung Yun (11243854), Yuri Choi (1715992), Hyung Ho Lee (9561851), Junseock Koh (11243857)

مصطلحات موضوعية: Biophysics, Biochemistry, Medicine, Genetics, Molecular Biology, Marine Biology, Hematology, Computational Biology, Biological Sciences not elsewhere classified, IDP hubs, Such IDP hubs, assembly, Nup 153 hub ensemble, IDR, Kap binding sites, function, low-affinity sites, Intrinsically Disordered Protein Hubs, protein, Multiple Interaction Partners Prevalent, Nup 153 hubs

Relation: https://figshare.com/articles/journal_contribution/Thermodynamic_Models_for_Assembly_of_Intrinsically_Disordered_Protein_Hubs_with_Multiple_Interaction_Partners/15127891

الاتاحة: https://doi.org/10.1021/jacs.1c00811.s001

المؤلفون: Nisan Denizce Can (11326595), Ezgi Basturk (11326598), Tugba Kizilboga (8198730), Izzet Mehmet Akcay (11326601), Baran Dingiloglu (11326604), Ozge Tatli (10224613), Sevilay Acar (11326607), Pelin Ozfiliz Kilbas (11326610), Efe Elbeyli (11326613), Serena Muratcioglu (4094119), Ayse Tarbin Jannuzzi (11326616), Attila Gursoy (10240), Ozlem Keskin (10238), Hamdi Levent Doganay (10224634), Betul Karademir Yilmaz (11326619), Gizem Dinler Doganay (8315484)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Molecular Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, ERAD, proteasome components, ER-associated protein degradation, interaction map, protein homeostasis, ER ATPase, Novel interaction partners, mass spectrometry-based proteomics, hotspot residues, MCF -7 cells, Rad 23B, degradation pathways, protein processing, ER-resident proteins, subcellular localizations, ubiquitinated proteins, silico predictions, isoform, protein quality control elements, multifunctional protein, interaction network, proteasomal activity

Relation: https://figshare.com/articles/journal_contribution/Uncropped_western_blot_scans_displayed_in_Fig_3A_/16433579

الاتاحة: https://doi.org/10.1371/journal.pone.0256640.s002

المؤلفون: Nisan Denizce Can (11326595), Ezgi Basturk (11326598), Tugba Kizilboga (8198730), Izzet Mehmet Akcay (11326601), Baran Dingiloglu (11326604), Ozge Tatli (10224613), Sevilay Acar (11326607), Pelin Ozfiliz Kilbas (11326610), Efe Elbeyli (11326613), Serena Muratcioglu (4094119), Ayse Tarbin Jannuzzi (11326616), Attila Gursoy (10240), Ozlem Keskin (10238), Hamdi Levent Doganay (10224634), Betul Karademir Yilmaz (11326619), Gizem Dinler Doganay (8315484)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Molecular Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, ERAD, proteasome components, ER-associated protein degradation, interaction map, protein homeostasis, ER ATPase, Novel interaction partners, mass spectrometry-based proteomics, hotspot residues, MCF -7 cells, Rad 23B, degradation pathways, protein processing, ER-resident proteins, subcellular localizations, ubiquitinated proteins, silico predictions, isoform, protein quality control elements, multifunctional protein, interaction network, proteasomal activity

Relation: https://figshare.com/articles/journal_contribution/Overexpression_of_Bag-1_isoforms_enhances_cell_proliferation_/16433576

الاتاحة: https://doi.org/10.1371/journal.pone.0256640.s001

المؤلفون: Nisan Denizce Can (11326595), Ezgi Basturk (11326598), Tugba Kizilboga (8198730), Izzet Mehmet Akcay (11326601), Baran Dingiloglu (11326604), Ozge Tatli (10224613), Sevilay Acar (11326607), Pelin Ozfiliz Kilbas (11326610), Efe Elbeyli (11326613), Serena Muratcioglu (4094119), Ayse Tarbin Jannuzzi (11326616), Attila Gursoy (10240), Ozlem Keskin (10238), Hamdi Levent Doganay (10224634), Betul Karademir Yilmaz (11326619), Gizem Dinler Doganay (8315484)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Molecular Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, ERAD, proteasome components, ER-associated protein degradation, interaction map, protein homeostasis, ER ATPase, Novel interaction partners, mass spectrometry-based proteomics, hotspot residues, MCF -7 cells, Rad 23B, degradation pathways, protein processing, ER-resident proteins, subcellular localizations, ubiquitinated proteins, silico predictions, isoform, protein quality control elements, multifunctional protein, interaction network, proteasomal activity

Relation: https://figshare.com/articles/journal_contribution/ICC_experiments_for_wild-type_MCF-7_cells_and_Bag-1_KO_MCF-7_cells_/16433588

الاتاحة: https://doi.org/10.1371/journal.pone.0256640.s005

المؤلفون: Nisan Denizce Can (11326595), Ezgi Basturk (11326598), Tugba Kizilboga (8198730), Izzet Mehmet Akcay (11326601), Baran Dingiloglu (11326604), Ozge Tatli (10224613), Sevilay Acar (11326607), Pelin Ozfiliz Kilbas (11326610), Efe Elbeyli (11326613), Serena Muratcioglu (4094119), Ayse Tarbin Jannuzzi (11326616), Attila Gursoy (10240), Ozlem Keskin (10238), Hamdi Levent Doganay (10224634), Betul Karademir Yilmaz (11326619), Gizem Dinler Doganay (8315484)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Molecular Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, ERAD, proteasome components, ER-associated protein degradation, interaction map, protein homeostasis, ER ATPase, Novel interaction partners, mass spectrometry-based proteomics, hotspot residues, MCF -7 cells, Rad 23B, degradation pathways, protein processing, ER-resident proteins, subcellular localizations, ubiquitinated proteins, silico predictions, isoform, protein quality control elements, multifunctional protein, interaction network, proteasomal activity

Relation: https://figshare.com/articles/journal_contribution/Uncropped_western_blot_scans_of_Co-IP_from_tumor_and_normal_tissue_samples_/16433591

الاتاحة: https://doi.org/10.1371/journal.pone.0256640.s006

المؤلفون: Nisan Denizce Can (11326595), Ezgi Basturk (11326598), Tugba Kizilboga (8198730), Izzet Mehmet Akcay (11326601), Baran Dingiloglu (11326604), Ozge Tatli (10224613), Sevilay Acar (11326607), Pelin Ozfiliz Kilbas (11326610), Efe Elbeyli (11326613), Serena Muratcioglu (4094119), Ayse Tarbin Jannuzzi (11326616), Attila Gursoy (10240), Ozlem Keskin (10238), Hamdi Levent Doganay (10224634), Betul Karademir Yilmaz (11326619), Gizem Dinler Doganay (8315484)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Molecular Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, ERAD, proteasome components, ER-associated protein degradation, interaction map, protein homeostasis, ER ATPase, Novel interaction partners, mass spectrometry-based proteomics, hotspot residues, MCF -7 cells, Rad 23B, degradation pathways, protein processing, ER-resident proteins, subcellular localizations, ubiquitinated proteins, silico predictions, isoform, protein quality control elements, multifunctional protein, interaction network, proteasomal activity

Relation: https://figshare.com/articles/journal_contribution/Cell_proliferation_assay_for_Bag-1_mutants_in_MCF-7_cells_/16433597

الاتاحة: https://doi.org/10.1371/journal.pone.0256640.s008

المؤلفون: Lulu Zheng (694762), Bin Zhu (182882), Zengrui Wu (1967824), Fang Liang (517551), Minghuang Hong (787130), Guixia Liu (151574), Weihua Li (144468), Guobin Ren (3103821), Yun Tang (151578)

مصطلحات موضوعية: Biochemistry, Molecular Biology, Biotechnology, Cancer, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, Two-Component Crystal Formation Two., capability, method, interaction partners, guide cocrystal design, tool, molecular-interaction topology info., SMINBR, Chemoinformatics Tool Specialized, substructure-molecular-interaction ., apatinib, model, validation, NCE

Relation: https://figshare.com/articles/journal_contribution/SMINBR_An_Integrated_Network_and_Chemoinformatics_Tool_Specialized_for_Prediction_of_Two-Component_Crystal_Formation/16455196

الاتاحة: https://doi.org/10.1021/acs.jcim.1c00601.s001

المؤلفون: Francesca Anson (4567057), S. Thayumanavan (1269861), Jeanne A. Hardy (1514026)

مصطلحات موضوعية: Biophysics, Medicine, Cell Biology, Molecular Biology, Developmental Biology, Cancer, Computational Biology, Environmental Sciences not elsewhere classified, Exogenous Introduction, protein network, interaction partners, executioner caspase proteins, apoptotic balance, pro-survival proteins, apoptotic network, apoptotic cell death, Executioner Caspases Results, caspase family, caspase -9, Different Apoptotic Outcomes, substrate cleavage, pro-survival factors, executioner caspases, caspase -3, caspase -7, family members

Relation: https://figshare.com/articles/journal_contribution/Exogenous_Introduction_of_Initiator_and_Executioner_Caspases_Results_in_Different_Apoptotic_Outcomes/14935824

الاتاحة: https://doi.org/10.1021/jacsau.1c00261.s001

المؤلفون: Debora Tibbe (10981202), Yingzhou Edward Pan (10981205), Carsten Reißner (5656531), Frederike L. Harms (10981208), Hans-Jürgen Kreienkamp (262726)

مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Neuroscience, Evolutionary Biology, Cancer, Infectious Diseases, Virology, interaction partners, MAGUK, CASK transcript variants, serine protein kinase, membrane-associated guanylate kinases, CASK variants, SAP, NCBI GenBank database

Relation: https://figshare.com/articles/journal_contribution/Original_blots_/14793191

الاتاحة: https://doi.org/10.1371/journal.pone.0253223.s001

المؤلفون: Hiral M. Sanghavi (10873419), Sharmistha Majumdar (6427640)

مصطلحات موضوعية: Biophysics, Biochemistry, Medicine, Genetics, Molecular Biology, Physiology, Developmental Biology, Virology, Biological Sciences not elsewhere classified, Physical Sciences not elsewhere classified, protein interaction partners, Human THAP 9, oligomerization, amino-terminal DNA binding, THAP 9 Transposase, HEK 293T cells, hTHAP 9. Elucidating, form higher-order oligomeric states, Drosophila P element transposase, proximity ligation assays, DmTNP, hTHAP 9, region

Relation: https://figshare.com/articles/journal_contribution/Oligomerization_of_THAP9_Transposase_via_Amino-Terminal_Domains/14675481

الاتاحة: https://doi.org/10.1021/acs.biochem.1c00010.s001

المؤلفون: Peter J. Cossar (4270306), Madita Wolter (8543997), Lars van Dijck (10891982), Dario Valenti (10891985), Laura M. Levy (2720956), Christian Ottmann (1399450), Luc Brunsveld (540877)

مصطلحات موضوعية: Biophysics, Biochemistry, Genetics, Molecular Biology, Cancer, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, stabilization, interaction partners, 14-3-3 hub proteins bind phosphoryl., Reversible Covalent Imine-Tethering, 1 interaction, hub proteins interactome, 14-3-3 PPI interface

Relation: https://figshare.com/articles/journal_contribution/Reversible_Covalent_Imine-Tethering_for_Selective_Stabilization_of_14-3_3_Hub_Protein_Interactions/14697059

الاتاحة: https://doi.org/10.1021/jacs.1c03035.s001

المؤلفون: Linda Martini (10099362), Sophie Brameyer (731567), Elisabeth Hoyer (10099365), Kirsten Jung (256459), Ulrich Gerland (243474)

مصطلحات موضوعية: Biophysics, Biochemistry, Cell Biology, Genetics, Molecular Biology, Infectious Diseases, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Monte Carlo simulations, membrane-integrated one-component r., cytoplasmic interaction partners, CadC, target site, target search process, coarse-grained lattice model, DNA target site, acid stress response Cad system, DNA target search, fluorescence microscopy experiments, search time, chromosomal target search, binding, 2 D diffusion, chromosome

Relation: https://figshare.com/articles/journal_contribution/Supplementary_text_/13717638

الاتاحة: https://doi.org/10.1371/journal.pcbi.1008680.s006