المؤلفون: James C. Kosmopoulos, Katherine M. Klier, Marguerite V. Langwig, Patricia Q. Tran, Karthik Anantharaman

المصدر: Microbiome, Vol 12, Iss 1, Pp 1-16 (2024)

مصطلحات موضوعية: Virome, Metagenome, Viral ecology, Differential abundance, Microbial ecology, QR100-130

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2049-2618

URL الوصول: https://doaj.org/article/bd85ca6e44ee49978306457ae60a9e25

المؤلفون: Jakob Wirbel, Morgan Essex, Sofia Kirke Forslund, Georg Zeller

المصدر: Genome Biology, Vol 25, Iss 1, Pp 1-26 (2024)

مصطلحات موضوعية: Microbiome, Benchmark, Metagenomics, Differential abundance, Confounding, Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/3c475cf29c064a6598e260d535a4baaa

المؤلفون: Clemens Kreutz, Eva Kohnert

المصدر: F1000Research, Vol 13 (2025)

مصطلحات موضوعية: 16S, microbiome, differential abundance, simulation, synthetic data, benchmarking, eng, Medicine, Science

وصف الملف: electronic resource

Relation: https://f1000research.com/articles/13-1180/v2; https://doaj.org/toc/2046-1402

URL الوصول: https://doaj.org/article/d394e461c542419b9be1a11f549f7c5f

المؤلفون: Akiko Ebihara, Hideki Fukuda, Yosuke Yamada, Taichi Yokokawa, Takeshi Miki, Toshi Nagata

المصدر: Frontiers in Marine Science, Vol 11 (2024)

مصطلحات موضوعية: particle dynamics, bacterial community composition, niche differentiation, ocean carbon export, transparent exopolymer particles, differential abundance analysis, Science, General. Including nature conservation, geographical distribution, QH1-199.5

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2024.1462522/full; https://doaj.org/toc/2296-7745

URL الوصول: https://doaj.org/article/967ffcb235ca4319a7df1e6380a3bca8

المؤلفون: Zhang, Shuangjie, Shen, Yuning, Chen, Irene A, Lee, Juhee

المصدر: The Annals of Applied Statistics. 17(3)

مصطلحات موضوعية: Mathematical Sciences, Statistics, Covariance matrix, differential abundance, factor model, joint sparsity, kernel model, zero inflation, multivariate count data, Econometrics, Statistics & Probability

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4qr9t31n

المؤلفون: Michelle Hagen, Rupashree Dass, Cathy Westhues, Jochen Blom, Sebastian J. Schultheiss, Sascha Patz

المصدر: Environmental Microbiome, Vol 19, Iss 1, Pp 1-12 (2024)

مصطلحات موضوعية: Metagenomics, Machine learning, SHAP values, Differential abundance analysis, Soil microbiome, Drought stress, Environmental sciences, GE1-350, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2524-6372

URL الوصول: https://doaj.org/article/0d4a1b13728c4612acc82876a3e85c03

المؤلفون: L. Brulin, S. Ducrocq, G. Even, M.P. Sanchez, S. Martel, S. Merlin, C. Audebert, P. Croiseau, J. Estellé

المصدر: Animal, Vol 18, Iss 8, Pp 101243- (2024)

مصطلحات موضوعية: Dairy performance, Differential abundance analysis, Diversity, Holstein cows, 16S rRNA gene, Animal culture, SF1-1100

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1751731124001745; https://doaj.org/toc/1751-7311

URL الوصول: https://doaj.org/article/8c92e1f64bba4477b68c9ab4d4b02b9e

المؤلفون: Nicolas Tyborski, Tina Koehler, Franziska A. Steiner, Shu-Yin Tung, Andreas J. Wild, Andrea Carminati, Carsten W. Mueller, Alix Vidal, Sebastian Wolfrum, Johanna Pausch, Tillmann Lueders

المصدر: Frontiers in Microbiology, Vol 15 (2024)

مصطلحات موضوعية: microbiome, root endosphere, rhizosphere, differential abundance analysis, maize (Zea mays L.), landraces, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2024.1386476/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/c81023a4a0894774830859597c9455f9

المؤلفون: Fusheng Bai, Lin You, Hongyan Lei, Xinming Li

المصدر: Experimental Gerontology, Vol 191, Iss , Pp 112444- (2024)

مصطلحات موضوعية: Parkinson's disease, Gut microbiota, Gut microbiota dysbiosis, Microbiome composition, Differential abundance, Meta-analysis, Medicine, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S053155652400086X; https://doaj.org/toc/1873-6815

URL الوصول: https://doaj.org/article/9d79cf33deb146429e48107c9a1f1599

المؤلفون: Haidong Yi, Alec Plotkin, Natalie Stanley

المصدر: Genome Biology, Vol 25, Iss 1, Pp 1-22 (2024)

مصطلحات موضوعية: Benchmarking, Differential abundance (DA), Clinical phenotyping, Single-cell bioinformatics, Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/aab8e5c02104436d9078bf33dc02548c

المؤلفون: Meng Zhang, Xiang Li, Adelumola Oladeinde, Michael Rothrock, Anthony Pokoo-Aikins, Gregory Zock

المصدر: Microorganisms, Vol 12, Iss 9, p 1866 (2024)

مصطلحات موضوعية: microbiome, zero-inflated compositional data, rate of change, differential abundance analysis (DAA), graph theory, slope-based distances, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.mdpi.com/2076-2607/12/9/1866; https://doaj.org/toc/2076-2607

URL الوصول: https://doaj.org/article/0acc493bef714c2b827002f27be63a79

المؤلفون: Juan Domingo, Oleksandra Kutsyr-Kolesnyk, Teresa Leon, Raul Perez-Moraga, Guillermo Ayala, Beatriz Roson

المصدر: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-26 (2023)

مصطلحات موضوعية: Single-cell RNA-seq, Partitioning around medoids, Differential abundance testing, Human endometrial cell types, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2105

URL الوصول: https://doaj.org/article/13580b8301c8456b98cd7e489a7bae72

المؤلفون: Tyborski, Nicolas, Koehler, Tina, Steiner, Franziska A., Tung, Shu-Yin, Wild, Andreas J., Carminati, Andrea, id_orcid:0 000-0001-7415-0480, Mueller, Carsten W., Vidal, Alix, Wolfrum, Sebastian, Pausch, Johanna, Lueders, Tillmann

المصدر: Frontiers in Microbiology, 15

مصطلحات موضوعية: microbiome, root endosphere, rhizosphere, differential abundance analysis, maize (Zea mays L.), landraces, ammonia-oxidizers

وصف الملف: application/application/pdf

Relation: info:eu-repo/semantics/altIdentifier/wos/001282739000001; http://hdl.handle.net/20.500.11850/688272

الاتاحة: https://hdl.handle.net/20.500.11850/688272
https://doi.org/10.3929/ethz-b-000688272

المؤلفون: Maurice, Kenji, Bourceret, Amélia, Vincent, Bryan, Boukcim, Hassan, Selosse, Marc-André, Ducousso, Marc

المساهمون: Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Valorhiz, Université Mohammed VI Polytechnique = Mohammed VI Polytechnic University Ben Guerir (UM6P), African Sustainable Agriculture Research Institute (ASARI), Department of Plant Taxonomy and Nature Conservation, University of Gdańsk (UG), Institut universitaire de France (IUF), Ministère de l'Education nationale, de l’Enseignement supérieur et de la Recherche (M.E.N.E.S.R.), This work was supported by the SoFunLand project, part of the Oasis program funded under the partnership between the RCU (Royal Commission for AlUla) and AFALULA (Agence Française pour le development d'AlUla).

المصدر: ISSN: 0929-1393.

مصطلحات موضوعية: Microbiome, Differential abundance, Simulated precipitation, Saudi Arabia Desert, Haloxylon salicornicum, [SDV.EE.ECO]Life Sciences [q-bio]/Ecology, environment/Ecosystems, [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology, [SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study

Relation: WOS: 001290883400001

الاتاحة: https://hal.inrae.fr/hal-04676664
https://hal.inrae.fr/hal-04676664v1/document
https://hal.inrae.fr/hal-04676664v1/file/1-s2.0-S0929139324001434-main.pdf
https://doi.org/10.1016/j.apsoil.2024.105412

المؤلفون: Kinga Humińska-Lisowska, Kinga Zielińska, Jan Mieszkowski, Monika Michałowska-Sawczyn, Paweł Cięszczyk, Paweł P Łabaj, Bartosz Wasąg, Barbara Frączek, Anna Grzywacz, Andrzej Kochanowicz, Tomasz Kosciolek

مصطلحات موضوعية: Ecology, Biological Sciences not elsewhere classified, human gut microbiota, bifidobacterium longum <, bifidobacterium adolescentis <, alistipes communis <, results remain inconclusive, maximal power parameters, significant differential abundance, identified several taxa, div >< p, different baseline abundances, comparing individuals based, cardiorespiratory fitness level, species strongly associated, microbiome features associated, specific microbiome features, microbiome features, results confirmed, average power, species identified, microbiome research, microbiome components, 88 species, microbiome health, wingate test, week period, strength athletes, sports community, sparcc recognized

Relation: https://figshare.com/articles/journal_contribution/Alpha_diversity_results_for_control_endurance_and_strength_groups_at_baseline_/25261073

الاتاحة: https://doi.org/10.1371/journal.pone.0297858.s002
https://figshare.com/articles/journal_contribution/Alpha_diversity_results_for_control_endurance_and_strength_groups_at_baseline_/25261073

المؤلفون: Kinga Humińska-Lisowska, Kinga Zielińska, Jan Mieszkowski, Monika Michałowska-Sawczyn, Paweł Cięszczyk, Paweł P Łabaj, Bartosz Wasąg, Barbara Frączek, Anna Grzywacz, Andrzej Kochanowicz, Tomasz Kosciolek

مصطلحات موضوعية: Ecology, Biological Sciences not elsewhere classified, human gut microbiota, bifidobacterium longum <, bifidobacterium adolescentis <, alistipes communis <, results remain inconclusive, maximal power parameters, significant differential abundance, identified several taxa, div >< p, different baseline abundances, comparing individuals based, cardiorespiratory fitness level, species strongly associated, microbiome features associated, specific microbiome features, microbiome features, results confirmed, average power, species identified, microbiome research, microbiome components, 88 species, microbiome health, wingate test, week period, strength athletes, sports community, sparcc recognized

Relation: https://figshare.com/articles/journal_contribution/Top_correlations_of_species_with_fitness_parameter_values_calculated_by_SparCC_/25261082

الاتاحة: https://doi.org/10.1371/journal.pone.0297858.s005
https://figshare.com/articles/journal_contribution/Top_correlations_of_species_with_fitness_parameter_values_calculated_by_SparCC_/25261082

المؤلفون: Kinga Humińska-Lisowska, Kinga Zielińska, Jan Mieszkowski, Monika Michałowska-Sawczyn, Paweł Cięszczyk, Paweł P Łabaj, Bartosz Wasąg, Barbara Frączek, Anna Grzywacz, Andrzej Kochanowicz, Tomasz Kosciolek

مصطلحات موضوعية: Ecology, Biological Sciences not elsewhere classified, human gut microbiota, bifidobacterium longum <, bifidobacterium adolescentis <, alistipes communis <, results remain inconclusive, maximal power parameters, significant differential abundance, identified several taxa, div >< p, different baseline abundances, comparing individuals based, cardiorespiratory fitness level, species strongly associated, microbiome features associated, specific microbiome features, microbiome features, results confirmed, average power, species identified, microbiome research, microbiome components, 88 species, microbiome health, wingate test, week period, strength athletes, sports community, sparcc recognized

Relation: https://figshare.com/articles/journal_contribution/Correlations_of_functions_with_fitness_parameter_values_calculated_by_SparCC_/25261085

الاتاحة: https://doi.org/10.1371/journal.pone.0297858.s006
https://figshare.com/articles/journal_contribution/Correlations_of_functions_with_fitness_parameter_values_calculated_by_SparCC_/25261085

المؤلفون: Kinga Humińska-Lisowska, Kinga Zielińska, Jan Mieszkowski, Monika Michałowska-Sawczyn, Paweł Cięszczyk, Paweł P Łabaj, Bartosz Wasąg, Barbara Frączek, Anna Grzywacz, Andrzej Kochanowicz, Tomasz Kosciolek

مصطلحات موضوعية: Ecology, Biological Sciences not elsewhere classified, human gut microbiota, bifidobacterium longum <, bifidobacterium adolescentis <, alistipes communis <, results remain inconclusive, maximal power parameters, significant differential abundance, identified several taxa, div >< p, different baseline abundances, comparing individuals based, cardiorespiratory fitness level, species strongly associated, microbiome features associated, specific microbiome features, microbiome features, results confirmed, average power, species identified, microbiome research, microbiome components, 88 species, microbiome health, wingate test, week period, strength athletes, sports community, sparcc recognized

Relation: https://figshare.com/articles/journal_contribution/Species_and_functions_unique_to_control_endurance_and_strength_/25261079

الاتاحة: https://doi.org/10.1371/journal.pone.0297858.s004
https://figshare.com/articles/journal_contribution/Species_and_functions_unique_to_control_endurance_and_strength_/25261079

المؤلفون: Kinga Humińska-Lisowska, Kinga Zielińska, Jan Mieszkowski, Monika Michałowska-Sawczyn, Paweł Cięszczyk, Paweł P Łabaj, Bartosz Wasąg, Barbara Frączek, Anna Grzywacz, Andrzej Kochanowicz, Tomasz Kosciolek

مصطلحات موضوعية: Ecology, Biological Sciences not elsewhere classified, human gut microbiota, bifidobacterium longum <, bifidobacterium adolescentis <, alistipes communis <, results remain inconclusive, maximal power parameters, significant differential abundance, identified several taxa, div >< p, different baseline abundances, comparing individuals based, cardiorespiratory fitness level, species strongly associated, microbiome features associated, specific microbiome features, microbiome features, results confirmed, average power, species identified, microbiome research, microbiome components, 88 species, microbiome health, wingate test, week period, strength athletes, sports community, sparcc recognized

Relation: https://figshare.com/articles/journal_contribution/Beta_diversity_results_for_control_endurance_and_strength_groups_at_baseline_/25261076

الاتاحة: https://doi.org/10.1371/journal.pone.0297858.s003

المؤلفون: Maria Berihu, Tracey S. Somera, Assaf Malik, Shlomit Medina, Edoardo Piombo, Ofir Tal, Matan Cohen, Alon Ginatt, Maya Ofek-Lalzar, Adi Doron-Faigenboim, Mark Mazzola, Shiri Freilich

المصدر: Microbiome, Vol 11, Iss 1, Pp 1-21 (2023)

مصطلحات موضوعية: Microbial community, Metagenomics, Shotgun sequencing, Differential abundance, Microbiome, Rhizosphere, Microbial ecology, QR100-130

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2049-2618

URL الوصول: https://doaj.org/article/b35901b4930f497bac6e7ecc78fbbaad