المؤلفون: Fuentenebro Navas, David, Steens, Jurre A., de Lannoy, Carlos, Noordijk, Ben, Pfeffer, Michael, de Ridder, Dick, H.J. Staals, Raymond, Schmid, Sonja

المصدر: ACS Nano 18 (2024) 26 ; ISSN: 1936-0851

مصطلحات موضوعية: CRISPR-Cas, nanopore, neural network, second messenger, single-molecule detection, type III

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/670430

الاتاحة: https://research.wur.nl/en/publications/nanopores-reveal-the-stoichiometry-of-single-oligoadenylates-prod
https://doi.org/10.1021/acsnano.3c11769

المؤلفون: Götz, Markus, Barth, Anders, Bohr, Søren S.R., Börner, Richard, Chen, Jixin, Cordes, Thorben, Erie, Dorothy A., Gebhardt, Christian, Hadzic, Mélodie C.A.S., Hamilton, George L., Hatzakis, Nikos S., Hugel, Thorsten, Kisley, Lydia, Lamb, Don C., de Lannoy, Carlos, Mahn, Chelsea, Dunukara, Dushani, de Ridder, Dick, Sanabria, Hugo, Schimpf, Julia, Seidel, Claus A.M., Sigel, Roland K.O., Sletfjerding, Magnus B., Thomsen, Johannes, Vollmar, Leonie, Wanninger, Simon, Weninger, Keith R., Xu, Pengning, Schmid, Sonja

المصدر: Nature Communications 15 (2024) 1 ; ISSN: 2041-1723

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/658114

الاتاحة: https://research.wur.nl/en/publications/reply-to-on-the-statistical-foundation-of-a-recent-single-molecul
https://doi.org/10.1038/s41467-024-47734-2

المؤلفون: Filius, Mike, van Wee, Raman, de Lannoy, Carlos, Westerlaken, Ilja, Li, Zeshi, Kim, Sung Hyun, de Agrela Pinto, Cecilia, Wu, Yunfei, Boons, Geert-Jan, Pabst, Martin, de Ridder, Dick, Joo, Chirlmin

المساهمون: Afd Chemical Biology and Drug Discovery, Sub Chemical Biology and Drug Discovery

مصطلحات موضوعية: Taverne, Condensed Matter Physics, Bioengineering, Atomic and Molecular Physics, and Optics, Electrical and Electronic Engineering, Biomedical Engineering, General Materials Science

وصف الملف: application/pdf

Relation: https://dspace.library.uu.nl/handle/1874/452387

الاتاحة: https://dspace.library.uu.nl/handle/1874/452387

المؤلفون: Joshi, Bhagyashree S, de Lannoy, Carlos, Howarth, Mark R, Kim, Sung Hyun, Joo, Chirlmin

مصطلحات موضوعية: computational structure prediction, programmable DNA binding, single-molecule FRET, single-molecule conformational analysis, single-molecule structural analysis, Fluorescence Resonance Energy Transfer, DNA, Single Molecule Imaging, Nanostructures, Proteins, Molecular Dynamics Simulation

وصف الملف: Print-Electronic; application/pdf

Relation: https://www.repository.cam.ac.uk/handle/1810/371509

الاتاحة: https://www.repository.cam.ac.uk/handle/1810/371509

المؤلفون: Joshi, Bhagyashree S., de Lannoy, Carlos, Howarth, Mark R., Kim, Sung Hyun, Joo, Chirlmin

المساهمون: European Research Council, National Research Foundation of Korea, Biotechnology and Biological Sciences Research Council, Ewha Womans University, Nederlandse Organisatie voor Wetenschappelijk Onderzoek

المصدر: Nano Letters ; volume 24, issue 28, page 8487-8494 ; ISSN 1530-6984 1530-6992

الاتاحة: http://dx.doi.org/10.1021/acs.nanolett.4c00447
https://pubs.acs.org/doi/pdf/10.1021/acs.nanolett.4c00447

المؤلفون: Noordijk, Ben, Nijland, Reindert, Carrion, Victor J., Raaijmakers, Jos M., de Ridder, Dick, de Lannoy, Carlos

المصدر: Bioinformatics Advances 3 (2023) 1 ; ISSN: 2635-0041

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/634117

الاتاحة: https://research.wur.nl/en/publications/baseless-lightweight-detection-of-sequences-in-raw-minion-data
https://doi.org/10.1093/bioadv/vbad017

المؤلفون: Afd Chemical Biology and Drug Discovery, Sub Chemical Biology and Drug Discovery, Filius, Mike, van Wee, Raman, de Lannoy, Carlos, Westerlaken, Ilja, Li, Zeshi, Kim, Sung Hyun, de Agrela Pinto, Cecilia, Wu, Yunfei, Boons, Geert-Jan, Pabst, Martin, de Ridder, Dick, Joo, Chirlmin

URL: https://doi.org/10.1038/s41565-023-01598-7
http://hdl.handle.net/1874/452387
https://dspace.library.uu.nl/handle/1874/452387
http://www.scopus.com/inward/record.url?scp=85184893671&partnerID=8YFLogxK
1748-3387
Nature Nanotechnology
19
5

المؤلفون: Götz, Markus, Barth, Anders, Bohr, Søren S.R., Börner, Richard, Chen, Jixin, Cordes, Thorben, Erie, Dorothy A., Gebhardt, Christian, Hadzic, Mélodie C.A.S., Hamilton, George L., Hatzakis, Nikos S., Hugel, Thorsten, Kisley, Lydia, Lamb, Don C., de Lannoy, Carlos, Mahn, Chelsea, Dunukara, Dushani, de Ridder, Dick, Sanabria, Hugo, Schimpf, Julia, Seidel, Claus A.M., Sigel, Roland K.O., Sletfjerding, Magnus B., Thomsen, Johannes, Vollmar, Leonie, Wanninger, Simon, Weninger, Keith R., Xu, Pengning, Schmid, Sonja

المصدر: Götz , M , Barth , A , Bohr , S S R , Börner , R , Chen , J , Cordes , T , Erie , D A , Gebhardt , C , Hadzic , M C A S , Hamilton , G L , Hatzakis , N S , Hugel , T , Kisley , L , Lamb , D C , de Lannoy , C , Mahn , C , Dunukara , D , de Ridder , D , Sanabria , H , Schimpf , J , Seidel , C A M , Sigel , R K O , Sletfjerding , M B , Thomsen , J , Vollmar , L , Wanninger , S , Weninger , K R , Xu , P & Schmid , S 2024 , ' Reply to : On the statistical foundation of a recent single molecule FRET benchmark ' , Nature Communications , vol. 15 , no. 1 , 3626 .

مصطلحات الفهرس: article

URL: https://curis.ku.dk/portal/da/publications/reply-to(a1a21f20-6a3e-448d-96c6-f7877899e48b).html
https://doi.org/10.1038/s41467-024-47734-2
https://curis.ku.dk/ws/files/392922703/s41467_024_47734_2.pdf

المؤلفون: Götz, Markus, Barth, Anders, Bohr, Søren S.R., Börner, Richard, Chen, Jixin, Cordes, Thorben, Erie, Dorothy A., Gebhardt, Christian, Hadzic, Mélodie C.A.S., Hamilton, George L., Hatzakis, Nikos S., Hugel, Thorsten, Kisley, Lydia, Lamb, Don C., de Lannoy, Carlos, Mahn, Chelsea, Dunukara, Dushani, de Ridder, Dick, Sanabria, Hugo, Schimpf, Julia, Seidel, Claus A.M., Sigel, Roland K.O., Sletfjerding, Magnus Berg, Thomsen, Johannes, Vollmar, Leonie, Wanninger, Simon, Weninger, Keith R., Xu, Pengning, Schmid, Sonja

المصدر: Nature Communications 13 (2022) 1 ; ISSN: 2041-1723

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/578177

الاتاحة: https://research.wur.nl/en/publications/a-blind-benchmark-of-analysis-tools-to-infer-kinetic-rate-constan
https://doi.org/10.1038/s41467-022-33023-3

المؤلفون: De Lannoy, Carlos, Lucas, Florian L.R., Maglia, Giovanni, De Ridder, Dick

المصدر: iScience 24 (2021) 10 ; ISSN: 2589-0042

مصطلحات موضوعية: Biocomputational method, Proteomics, Sequence analysis

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/562330

الاتاحة: https://research.wur.nl/en/publications/in-silico-assessment-of-a-novel-single-molecule-protein-fingerpri
https://doi.org/10.1016/j.isci.2021.103202

المؤلفون: De Lannoy, Carlos Victor, Filius, Mike, Van Wee, Raman, Joo, Chirlmin, De Ridder, Dick

المصدر: iScience 24 (2021) 11 ; ISSN: 2589-0042

مصطلحات موضوعية: Biophysics, Mathematical biosciences, Proteomics, Structural biology

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/562328

الاتاحة: https://research.wur.nl/en/publications/evaluation-of-fret-x-for-single-molecule-protein-fingerprinting
https://doi.org/10.1016/j.isci.2021.103239

المؤلفون: de Lannoy, Carlos Victor, Filius, Mike, Joo, Chirlmin

المصدر: Alzheimer's & Dementia ; volume 19, issue S24 ; ISSN 1552-5260 1552-5279

الاتاحة: http://dx.doi.org/10.1002/alz.082869

المؤلفون: de Lannoy, Carlos, de Ridder, Dick, Risse, Judith

المصدر: F1000Research 6 (2017) ; ISSN: 2046-1402

مصطلحات موضوعية: MinION, Nanopore sequencing, Review, textit sequencing

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/440236

الاتاحة: https://research.wur.nl/en/publications/the-long-reads-ahead-de-novo-genome-assembly-using-the-minion
https://doi.org/10.12688/f1000research.12012.2

المؤلفون: Goetz, Markus, Barth, Anders, Bohr, Søren S.-R., Boerner, Richard, Chen, Jixin, Cordes, Thorben, Erie, Dorothy A., Gebhardt, Christian, Hadzic, Melodie C. A. S., Hamilton, George L., Hatzakis, Nikos S., Hugel, Thorsten, Kisley, Lydia, Lamb, Don C., de Lannoy, Carlos, Mahn, Chelsea, Dunukara, Dushani, de Ridder, Dick, Sanabria, Hugo, Schimpf, Julia, Seidel, Claus A. M., Sigel, Roland K. O., Sletfjerding, Magnus Berg, Thomsen, Johannes, Vollmar, Leonie, Wanninger, Simon, Weninger, Keith R., Xu, Pengning, Schmid, Sonja

المصدر: Goetz , M , Barth , A , Bohr , S S-R , Boerner , R , Chen , J , Cordes , T , Erie , D A , Gebhardt , C , Hadzic , M C A S , Hamilton , G L , Hatzakis , N S , Hugel , T , Kisley , L , Lamb , D C , de Lannoy , C , Mahn , C , Dunukara , D , de Ridder , D , Sanabria , H , Schimpf , J , Seidel , C A M , Sigel , R K O , Sletfjerding , M B , Thomsen , J , Vollmar , L , Wanninger , S , Weninger , K R , Xu , P & Schmid , S 2022 , ' A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories ' , Nature Communications , vol. 13 , no. 1 , 5402 .

مصطلحات الفهرس: CONFORMATIONAL DYNAMICS, TIME, FLUCTUATION, BINDING, HMMS, article

URL: https://curis.ku.dk/portal/da/publications/a-blind-benchmark-of-analysis-tools-to-infer-kinetic-rate-constants-from-singlemolecule-fret-trajectories(dfbe379c-5df3-4d9c-b57f-5944fc8ab450).html
https://doi.org/10.1038/s41467-022-33023-3
https://curis.ku.dk/ws/files/321268869/s41467_022_33023_3.pdf

المؤلفون: Noordijk, Ben, Nijland, Reindert, Carrion, Victor J., Raaijmakers, Jos, de Ridder, Dick, de Lannoy, Carlos

مصطلحات الفهرس: benchmarking, nanopore sequencing, nucleid acid sequencing, sequence detection, Dataset

URL: https://edepot.wur.nl/574053
https://edepot.wur.nl/574053

المؤلفون: de Ridder, D., de Lannoy, Carlos Victor

مصطلحات الفهرس: Life Science, Doctoral thesis

URL: https://edepot.wur.nl/577300
https://edepot.wur.nl/577300

المؤلفون: de Lannoy, Carlos Victor, Filius, Mike, Kim, Sung Hyun, Joo, Chirlmin, de Ridder, Dick

المصدر: Biophysical Journal 120 (2021) 16 ; ISSN: 0006-3495

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/552154

الاتاحة: https://research.wur.nl/en/publications/fretboard-semisupervised-classification-of-fret-traces
https://doi.org/10.1016/j.bpj.2021.06.030

المؤلفون: de Lannoy, Carlos, Filius, Mike, van Wee, Raman, Joo, Chirlmin, de Ridder, Dick

المصدر: SSRN Electronic Journal ; ISSN 1556-5068

الاتاحة: http://dx.doi.org/10.2139/ssrn.3881353

المؤلفون: de Lannoy, Carlos, Maglia, Giovanni, de Ridder, Dick

المصدر: SSRN Electronic Journal ; ISSN 1556-5068

الاتاحة: http://dx.doi.org/10.2139/ssrn.3859664

المؤلفون: Joo, Chirlmin, Filius, Mike, De Lannoy, Carlos, De Ridder, Dick

مصطلحات موضوعية: Bioinformatics, Bioinformatica, Life Science, EPS

وصف الملف: application/octet-stream; text/html

URL الوصول: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::4f6cc96184940c3835c2e5fdddcb3c8d
https://research.wur.nl/en/publications/single-molecule-fret-for-protein-characterization