المؤلفون: Arantes, Pablo R, Patel, Amun C, Palermo, Giulia

المصدر: Journal of Molecular Biology. 434(17)

مصطلحات موضوعية: Microbiology, Biochemistry and Cell Biology, Biological Sciences, Allosteric Regulation, CRISPR-Cas Systems, DNA, Gene Editing, Molecular Dynamics Simulation, Nucleic Acid Conformation, Nucleosomes, Protein Conformation, Proteins, Spliceosomes, molecular dynamics, graph theory, CRISPR-Cas9, nucleosome core particle, spliceosome, Medicinal and Biomolecular Chemistry, Biochemistry & Molecular Biology, Biochemistry and cell biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/8vp7r1mz

المؤلفون: Gillet, Natacha, Dumont, Elise, Bignon, Emmanuelle

المساهمون: Laboratoire de Chimie - UMR5182 (LC), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS), Institut de Chimie de Nice (ICN), Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UniCA), Laboratoire de Physique et Chimie Théoriques (LPCT), Institut de Chimie - CNRS Chimie (INC-CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), ANR-20-CE29-0002,NucleoMAP,Simulations Multiéchelles de l'ADN Nucléosomal: Cartographier le Radical Cation Guanine(2020)

المصدر: ISSN: 1867-2450.

مصطلحات موضوعية: DNA damage repair lesion recognition nucleosome core particle molecular dynamics computational approaches, DNA damage repair, lesion recognition, nucleosome core particle, molecular dynamics, computational approaches, [CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry

الاتاحة: https://hal.science/hal-04743222
https://hal.science/hal-04743222v1/document
https://hal.science/hal-04743222v1/file/nucleosome_%20insights%20from%20computational%20methods_marked.pdf
https://doi.org/10.1007/s12551-024-01183-9

المؤلفون: Julia C. Cook, Sarah Delaney

المصدر: DNA, Vol 2, Iss 4, Pp 248-263 (2022)

مصطلحات موضوعية: base-excision repair, nucleosome core particle, nucleosome dynamics, DNA damage repair, Biochemistry, QD415-436

وصف الملف: electronic resource

Relation: https://www.mdpi.com/2673-8856/2/4/18; https://doaj.org/toc/2673-8856

URL الوصول: https://doaj.org/article/0d45cce4966f44afb74e3573542a09fc

المؤلفون: Hyeonjoong Kwon, Jumi Kim, Chanho Song, Muhammad Azhar Sajjad, Jiseon Ha, Jaesung Jung, Sun Park, Ho-Joon Shin, Kyongmin Kim

المصدر: Frontiers in Cellular and Infection Microbiology, Vol 13 (2023)

مصطلحات موضوعية: hepatitis B virus, HBV replication, core particle, PPIase Pin1, Pin1-core particle interaction, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcimb.2023.1195063/full; https://doaj.org/toc/2235-2988

URL الوصول: https://doaj.org/article/e5aa28c3cb00477c979d3b7c53b8641b

المؤلفون: Bacic, Luka, Sabantsev, Anton, Deindl, Sebastian

المصدر: Current opinion in structural biology. 65:61-68

مصطلحات موضوعية: NUCLEOSOME CORE PARTICLE, ENERGY-TRANSFER, DNA, FORCE, FRET, SPECTROSCOPY

وصف الملف: electronic

URL الوصول: https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-433374
https://doi.org/10.1016/j.sbi.2020.05.006
https://uu.diva-portal.org/smash/get/diva2:1525240/FULLTEXT01.pdf

المؤلفون: Christine E. Jennings, Casey J. Zoss, Emma A. Morrison

المصدر: Frontiers in Molecular Biosciences, Vol 10 (2023)

مصطلحات موضوعية: H3 tail, nucleosome core particle, protein dynamics, NMR, arginine, citrullination, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmolb.2023.1150400/full; https://doaj.org/toc/2296-889X

URL الوصول: https://doaj.org/article/108affeb94e9402b8938f8ddf8c382a9

المؤلفون: Huimin Yang, Xuguang Shi

المصدر: Biomolecules, Vol 13, Iss 12, p 1686 (2023)

مصطلحات موضوعية: nucleosome core particle, DNA free energy, minimum free energy principle, Landau theory, Hopfion model, Microbiology, QR1-502

Relation: https://www.mdpi.com/2218-273X/13/12/1686; https://doaj.org/toc/2218-273X; https://doaj.org/article/db195473380f4803983563bf728586c5

الاتاحة: https://doi.org/10.3390/biom13121686
https://doaj.org/article/db195473380f4803983563bf728586c5

المؤلفون: Sun, Tiedong, Minhas, Vishal, Mirzoev, Alexander, Korolev, Nikolay, Lyubartsev, Alexander P., Nordenskiöld, Lars

المساهمون: School of Biological Sciences

مصطلحات موضوعية: Science::Biological sciences::Biophysics, Science::Chemistry::Physical chemistry::Thermodynamics, Nucleosome Core Particle, Bottom-Up Coarse-Graining, Divide and Conquer, Inverse Monte Carlo, Cobalt(III)-Hexammine, Explicit Ions

وصف الملف: application/pdf; application/octet-stream

Relation: MOE2019-T3-1-012; Journal of Chemical Theory and Computation; Sun, T., Minhas, V., Mirzoev, A., Korolev, N., Lyubartsev, A. P. & Nordenskiöld, L. (2022). A bottom-up coarse-grained model for nucleosome–nucleosome interactions with explicit ions. Journal of Chemical Theory and Computation, 18(6), 3948-3960. https://dx.doi.org/10.1021/acs.jctc.2c00083; https://hdl.handle.net/10356/161452; 2-s2.0-85131601450; 18; 3948; 3960

الاتاحة: https://hdl.handle.net/10356/161452
https://doi.org/10.1021/acs.jctc.2c00083

المؤلفون: Ekaterina A. Belousova, Olga I. Lavrik

المصدر: Genes; Volume 14; Issue 1; Pages: 112

مصطلحات موضوعية: nucleosome core particle, DNA damage response, PARP1, PAR, histone H1, HMGB1

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Molecular Genetics and Genomics; https://dx.doi.org/10.3390/genes14010112

الاتاحة: https://doi.org/10.3390/genes14010112

المؤلفون: Xiaohui Song (1578754), Xingyu Zhang (408987), Zihao Ou (3222930), Ya-Qian Zhang (2570404), Mufan Li (1453240)

مصطلحات موضوعية: Biophysics, Medicine, Cell Biology, Biotechnology, Ecology, Developmental Biology, Inorganic Chemistry, Space Science, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, solid shell domains, simple qualitative measurement, observable shell permits, nanoparticle surface wettability, anisotropic surface wetting, surface chemistry, anisotropic nanoparticles, strategy involves, facile method, encapsulation one, different sizes, different kinds, desired position, core position, core particle

Relation: https://figshare.com/articles/journal_contribution/Controlling_the_Anisotropic_Surface_Wetting_of_Metal_Nanoparticles_by_a_Competitive_Ligand_Packing_Strategy_Implications_for_Encapsulation/16826633

الاتاحة: https://doi.org/10.1021/acsanm.1c02276.s001

المؤلفون: Manideep C. Pachva, Alexei F. Kisselev, Bakhyt T. Matkarimov, Murat Saparbaev, Regina Groisman

المصدر: Frontiers in Cell and Developmental Biology, Vol 8 (2020)

مصطلحات موضوعية: DNA-histone cross-link, nucleosome core particle, chromatin, genome instability, spartan protease, proteasome, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcell.2020.607045/full; https://doaj.org/toc/2296-634X

URL الوصول: https://doaj.org/article/2abc33f9fb3b446bb88aee0b291611af

المؤلفون: Huang, Rui, Pérez, Felipe, Kay, Lewis E.

المصدر: Proceedings of the National Academy of Sciences of the United States of America, 2017 Nov . 114(46), E9846-E9854.

URL الوصول: https://www.jstor.org/stable/26486590

المؤلفون: Yu Jin Kim (804271), Troy D. Loeffler (5485220), Zhaowei Chen (1576393), Subramanian K. R. S. Sankaranarayanan (5175344)

مصطلحات موضوعية: Biophysics, Biochemistry, Biotechnology, Ecology, Virology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, BM, core particle, Ultraefficient Photoinduced Particl., single-PC 60 surfactant-covered colloid, PC 60-C 60 colloids, van der Waals effects, C 60 molecules, shell part, crystal regimes, Promoting Noncovalent Intermolecula., C 60 Core Particle, charge separation, particle sizes, n-type particles, NP, p-type core sphere, volume fraction, C 60 aggregates, interaction, Aqueous PC 60s Colloids

Relation: https://figshare.com/articles/journal_contribution/Promoting_Noncovalent_Intermolecular_Interactions_Using_a_C_sub_60_sub_Core_Particle_in_Aqueous_PC60s-Covered_Colloids_for_Ultraefficient_Photoinduced_Particle_Activity/9970589

الاتاحة: https://doi.org/10.1021/acsami.9b14240.s001

المؤلفون: Pachva, Manideep C., Kisselev, Alexei F., Matkarimov, Bakhyt T., Saparbaev, Murat, Groisman, Regina

مصطلحات موضوعية: DNA-histone cross-link, nucleosome core particle, chromatin, genome instability, spartan protease, proteasome, DNA repair, Research Subject Categories::NATURAL SCIENCES::Biology

Relation: Frontiers in Cell and Developmental Biology; Pachva, M. C., Kisselev, A. F., Matkarimov, B. T., Saparbaev, M., & Groisman, R. (2020). DNA-histone cross-links: Formation and repair. Frontiers in Cell and Developmental Biology, 8, 607045.; https://www.frontiersin.org/articles/10.3389/fcell.2020.607045/full; https://doi.org/10.3389/fcell.2020.607045; http://nur.nu.edu.kz/handle/123456789/5232

الاتاحة: http://nur.nu.edu.kz/handle/123456789/5232
https://www.frontiersin.org/articles/10.3389/fcell.2020.607045/full
https://doi.org/10.3389/fcell.2020.607045

المؤلفون: Yohannes Afework Mebratu, Zerihun Hailemariam Negasi, Saugata Dutta, Joselyn Rojas-Quintero, Yohannes Tesfaigzi

المصدر: Cells; Volume 9; Issue 10; Pages: 2221

مصطلحات موضوعية: protein degradation, core particle, regulatory particle, endosome, autophagy, aggresome

وصف الملف: application/pdf

Relation: https://dx.doi.org/10.3390/cells9102221

الاتاحة: https://doi.org/10.3390/cells9102221

المؤلفون: Lesne, Jean, Locard-Paulet, Marie, Parra, Julien, Zivkovic, Dusan, Menneteau, Thomas, Bousquet, Marie-Pierre, Burlet-Schiltz, Odile, Marcoux, Julien

المصدر: Lesne , J , Locard-Paulet , M , Parra , J , Zivkovic , D , Menneteau , T , Bousquet , M-P , Burlet-Schiltz , O & Marcoux , J 2020 , ' Conformational maps of human 20S proteasomes reveal PA28-and immuno-dependent inter-ring crosstalks ' , Nature Communications , vol. 11 , no. 1 , 6140 . https://doi.org/10.1038/s41467-020-19934-z

مصطلحات موضوعية: 26S PROTEASOME, ACTIVATOR PA28, CORE PARTICLE, YEAST, 19S, IMMUNOPROTEASOME, DEGRADATION, INHIBITION, PROTEOMICS, RESOLUTION

وصف الملف: application/pdf

الاتاحة: https://curis.ku.dk/portal/da/publications/conformational-maps-of-human-20s-proteasomes-reveal-pa28and-immunodependent-interring-crosstalks(b2200191-f8c4-4be4-b12f-66569fdec577).html
https://doi.org/10.1038/s41467-020-19934-z
https://curis.ku.dk/ws/files/253732738/s41467_020_19934_z.pdf

المؤلفون: Haruna Hidaka, Kazumi Saikusa, Satoko Akashi, Shunsuke Izumi

المصدر: Mass Spectrometry. 2020, 9(1):0090

المؤلفون: Wilson, MD, Renault, L, Maskell, DP, Ghoneim, M, Pye, VE, Nans, A, Rueda, DS, Cherepanov, P, Costa, A

مصطلحات موضوعية: Science & Technology, Multidisciplinary Sciences, Science & Technology - Other Topics, CRYO-EM, CORE PARTICLE, CRYSTAL-STRUCTURE, STRUCTURAL BASIS, CRYOELECTRON MICROSCOPY, NUCLEIC-ACID, RECOGNITION, BINDING, VISUALIZATION, COMPLEXES

Relation: Nature Communications; http://hdl.handle.net/10044/1/73585; https://dx.doi.org/10.1038/s41467-019-12007-w

الاتاحة: http://hdl.handle.net/10044/1/73585
https://doi.org/10.1038/s41467-019-12007-w

المؤلفون: Kim, K

المساهمون: 103629, Kim, K

مصطلحات موضوعية: Cell Nucleus, Cytoplasm, Hepatitis B virus, Humans, Peptidyl-Prolyl Cis-Trans Isomerase NIMA-Interacting 4, Peptidylprolyl Isomerase, cccDNA, core particle, HBc, HBV replication, HBx, parvulin 14, parvulin 17, peptidyl-prolyl cis/trans isomerase, PIN4

Relation: J019994915; http://repository.ajou.ac.kr/handle/201003/25583; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9962505; Viruses, 15(2). : 457-457, 2023

الاتاحة: http://repository.ajou.ac.kr/handle/201003/25583
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9962505
https://doi.org/10.3390/v15020457

المؤلفون: Farangis Mansouri, Luc Patiny, Daniel Ortiz, Laure Menin, Curtis A. Davey, Fakhrossadat Mohammadi, Paul J. Dyson

المساهمون: School of Biological Sciences, NTU Institute of Structural Biology

المصدر: JBIC Journal of Biological Inorganic Chemistry. 27:239-248

مصطلحات موضوعية: ligands, binding-sites, Oligonucleotides, Biological sciences [Science], nucleosome structure, metalation, DNA, Biochemistry, adducts, Mass Spectrometry, Histones, Inorganic Chemistry, protein cross-linking, sulfur, drug targets, dna-protein, histone core particle, glutathione, Cisplatin, Peptides, Platinum

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c142020cc6eb4345e3f9e83280daffdf
https://doi.org/10.1007/s00775-022-01924-9