نتائج البحث - "WGS typing"

1

Academic Journal

Atypical Serogroup IVb-v1 of Listeria monocytogenes Assigned to New ST2801, Widely Spread and Persistent in the Environment of a Pork-Meat Producing Plant of Central Italy

المؤلفون: Fabrizia Guidi, Cinzia Lorenzetti, Gabriella Centorotola, Marina Torresi, Cesare Cammà, Alexandra Chiaverini, Francesco Pomilio, Giuliana Blasi

المصدر: Frontiers in Microbiology, Vol 13 (2022)

مصطلحات موضوعية: Listeria monocytogenes, serogroup IVb-v1, ST2801 (CC218), food producing environment, persistence, WGS typing, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.930895/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/b1067c197ff940edbe96e79f0e5b8c6c

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2

Academic Journal

Valley Fever: Finding New Places for an Old Disease: Coccidioides immitis Found in Washington State Soil Associated With Recent Human Infection

المؤلفون: Litvintseva, Anastasia P, Marsden-Haug, Nicola, Hurst, Steven, Hill, Heather, Gade, Lalitha, Driebe, Elizabeth M, Ralston, Cindy, Roe, Chandler, Barker, Bridget M, Goldoft, Marcia, Keim, Paul, Wohrle, Ron, Thompson, George R, Engelthaler, David M, Brandt, Mary E, Chiller, Tom

المصدر: Clinical Infectious Diseases. 60(1)

مصطلحات موضوعية: Medical Microbiology, Biomedical and Clinical Sciences, Clinical Sciences, Vaccine Related, Prevention, Valley Fever, Human Genome, Rare Diseases, Infectious Diseases, Biodefense, Emerging Infectious Diseases, Genetics, 2.2 Factors relating to the physical environment, Aetiology, Infection, Cluster Analysis, Coccidioides, Coccidioidomycosis, DNA, Fungal, Endemic Diseases, Genome, Fungal, Humans, Microbiological Techniques, Molecular Sequence Data, Real-Time Polymerase Chain Reaction, Sequence Analysis, DNA, Sequence Homology, Soil Microbiology, Washington, valley fever, soil detection, WGS typing, Biological Sciences, Medical and Health Sciences, Microbiology, Clinical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/7xv6z11w

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3

Academic Journal

Decentralized Investigation of Bacterial Outbreaks Based on Hashed cgMLST

المؤلفون: Carlus Deneke, Laura Uelze, Holger Brendebach, Simon H. Tausch, Burkhard Malorny

المصدر: Frontiers in Microbiology, Vol 12 (2021)

مصطلحات موضوعية: cgMLST, WGS typing, molecular surveillance, comparative microbial genomics, Salmonella, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.649517/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/774b28e00f8648fa96e188b27f44b066

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4

Academic Journal

Investigating Major Recurring Campylobacter jejuni Lineages in Luxembourg Using Four Core or Whole Genome Sequencing Typing Schemes

المؤلفون: Morgane Nennig, Ann-Katrin Llarena, Malte Herold, Joël Mossong, Christian Penny, Serge Losch, Odile Tresse, Catherine Ragimbeau

المصدر: Frontiers in Cellular and Infection Microbiology, Vol 10 (2021)

مصطلحات موضوعية: whole genome sequencing, Campylobacter jejuni, typing schemes, WGS typing scheme comparison, recurring genotypes, clones, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcimb.2020.608020/full; https://doaj.org/toc/2235-2988

URL الوصول: https://doaj.org/article/48999d1acae34635b2ec0eba50fdd1e1

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5

Academic Journal

Intensive Environmental Surveillance Plan for Listeria monocytogenes in Food Producing Plants and Retail Stores of Central Italy: Prevalence and Genetic Diversity

المؤلفون: Gabriella Centorotola, Fabrizia Guidi, Guglielmo D’Aurizio, Romolo Salini, Marco Di Domenico, Donatella Ottaviani, Annalisa Petruzzelli, Stefano Fisichella, Anna Duranti, Franco Tonucci, Vicdalia Aniela Acciari, Marina Torresi, Francesco Pomilio, Giuliana Blasi

المصدر: Foods; Volume 10; Issue 8; Pages: 1944

مصطلحات موضوعية: foodborne pathogen, food processing environments, monitoring plan, WGS typing, environmental stress resistance, QAC-resistance, persistence, virulence

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Food Microbiology; https://dx.doi.org/10.3390/foods10081944

الاتاحة: https://doi.org/10.3390/foods10081944

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6

Data_Sheet_2_Atypical Serogroup IVb-v1 of Listeria monocytogenes Assigned to New ST2801, Widely Spread and Persistent in the Environment of a Pork-Meat Producing Plant of Central Italy.xlsx

المؤلفون: Fabrizia Guidi, Cinzia Lorenzetti, Gabriella Centorotola, Marina Torresi, Cesare Cammà, Alexandra Chiaverini, Francesco Pomilio, Giuliana Blasi

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, Listeria monocytogenes, serogroup IVb-v1, ST2801 (CC218), food producing environment, persistence, WGS typing, environmental sampling

Relation: https://figshare.com/articles/dataset/Data_Sheet_2_Atypical_Serogroup_IVb-v1_of_Listeria_monocytogenes_Assigned_to_New_ST2801_Widely_Spread_and_Persistent_in_the_Environment_of_a_Pork-Meat_Producing_Plant_of_Central_Italy_xlsx/20156156

الاتاحة: https://doi.org/10.3389/fmicb.2022.930895.s001
https://figshare.com/articles/dataset/Data_Sheet_2_Atypical_Serogroup_IVb-v1_of_Listeria_monocytogenes_Assigned_to_New_ST2801_Widely_Spread_and_Persistent_in_the_Environment_of_a_Pork-Meat_Producing_Plant_of_Central_Italy_xlsx/20156156

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7

Investigating Major Recurring

المؤلفون: Morgane, Nennig, Ann-Katrin, Llarena, Malte, Herold, Joël, Mossong, Christian, Penny, Serge, Losch, Odile, Tresse, Catherine, Ragimbeau

المصدر: Frontiers in Cellular and Infection Microbiology

مصطلحات موضوعية: whole genome sequencing, Whole Genome Sequencing, Luxembourg, whole genome MLST, Pilot Projects, typing schemes, WGS typing scheme comparison, core genome MLST, Campylobacter jejuni, Cellular and Infection Microbiology, clones, recurring genotypes, Genome, Bacterial, Multilocus Sequence Typing, Original Research

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::fc67e6607cd961e3a446ea09b4e73551
https://pubmed.ncbi.nlm.nih.gov/33489938

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8

Image

Image_1_Decentralized Investigation of Bacterial Outbreaks Based on Hashed cgMLST.PDF

المؤلفون: Carlus Deneke (169004), Laura Uelze (7493375), Holger Brendebach (4953334), Simon H. Tausch (7136177), Burkhard Malorny (93357)

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, cgMLST, WGS typing, molecular surveillance, comparative microbial genomics, Salmonella

Relation: https://figshare.com/articles/figure/Image_1_Decentralized_Investigation_of_Bacterial_Outbreaks_Based_on_Hashed_cgMLST_PDF/14791944

الاتاحة: https://doi.org/10.3389/fmicb.2021.649517.s003

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9

Data_Sheet_1_Decentralized Investigation of Bacterial Outbreaks Based on Hashed cgMLST.docx

المؤلفون: Carlus Deneke (169004), Laura Uelze (7493375), Holger Brendebach (4953334), Simon H. Tausch (7136177), Burkhard Malorny (93357)

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, cgMLST, WGS typing, molecular surveillance, comparative microbial genomics, Salmonella

Relation: https://figshare.com/articles/dataset/Data_Sheet_1_Decentralized_Investigation_of_Bacterial_Outbreaks_Based_on_Hashed_cgMLST_docx/14695545

الاتاحة: https://doi.org/10.3389/fmicb.2021.649517.s001

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10

Table_3_Investigating Major Recurring Campylobacter jejuni Lineages in Luxembourg Using Four Core or Whole Genome Sequencing Typing Schemes.xlsx

المؤلفون: Morgane Nennig, Ann-Katrin Llarena, Malte Herold, Joël Mossong, Christian Penny, Serge Losch, Odile Tresse, Catherine Ragimbeau

مصطلحات موضوعية: Clinical Microbiology, Medical Bacteriology, Medical Infection Agents (incl. Prions), Medical Virology, whole genome sequencing, Campylobacter jejuni, typing schemes, WGS typing scheme comparison, recurring genotypes, clones, core genome MLST, whole genome MLST

Relation: https://figshare.com/articles/dataset/Table_3_Investigating_Major_Recurring_Campylobacter_jejuni_Lineages_in_Luxembourg_Using_Four_Core_or_Whole_Genome_Sequencing_Typing_Schemes_xlsx/13543505

الاتاحة: https://doi.org/10.3389/fcimb.2020.608020.s003
https://figshare.com/articles/dataset/Table_3_Investigating_Major_Recurring_Campylobacter_jejuni_Lineages_in_Luxembourg_Using_Four_Core_or_Whole_Genome_Sequencing_Typing_Schemes_xlsx/13543505

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11

Valley fever: finding new places for an old disease: Coccidioides immitis found in Washington State soil associated with recent human infection

المؤلفون: Lalitha Gade, Elizabeth M. Driebe, Bridget M. Barker, Chandler C. Roe, Anastasia P. Litvintseva, Ron Wohrle, Heather Hill, Marcia Goldoft, Mary E. Brandt, Tom Chiller, Steven F. Hurst, Cindy Ralston, David M. Engelthaler, Paul Keim, Nicola Marsden-Haug, George Richard Thompson

المصدر: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, vol 60, iss 1

مصطلحات موضوعية: Microbiological Techniques, Endemic Diseases, Sequence Homology, Disease, valley fever, Medical and Health Sciences, law.invention, law, Microbial colonization, Cluster Analysis, 2.2 Factors relating to the physical environment, Colonization, Aetiology, DNA, Fungal, soil detection, Polymerase chain reaction, Soil Microbiology, Coccidioidomycosis, Genome, biology, Biological Sciences, Valley fever, Fungal, Infectious Diseases, Genome, Fungal, Infection, Sequence Analysis, Microbiology (medical), Washington, Coccidioides immitis, Molecular Sequence Data, Real-Time Polymerase Chain Reaction, Microbiology, Vaccine Related, Rare Diseases, Electronic Article, Biodefense, medicine, Genetics, Humans, Coccidioides, Prevention, Human Genome, Sequence Analysis, DNA, DNA, medicine.disease, biology.organism_classification, Virology, Sequence homology, Emerging Infectious Diseases, WGS typing

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e6e5e6a4d75081fdef0e2ee4353c229d
https://escholarship.org/uc/item/7xv6z11w

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12

Electronic Resource

Investigating Major Recurring Campylobacter jejuni Lineages in Luxembourg Using Four Core or Whole Genome Sequencing Typing Schemes

المؤلفون: Laboratoire National de Santé [research center], INRAE - Oniris (France) [research center], Fonds National de la Recherche - FnR [sponsor], RFI Food for Tomorrow of Région Pays de la Loire - France [sponsor], Nennig, Morgane, LLARENA, Ann-Katrin, HEROLD, Malte, MOSSONG, Joël, PENNY, Christian, LOSCH, Serge, TRESSE, Odile, Ragimbeau, Catherine

مصطلحات الفهرس: whole genome sequencing, Campylobacter jejuni, typing schemes, WGS typing scheme comparison, recurring genotypes, clones, core genome MLST, whole genome MLST, info:eu-repo/semantics/article

URL: http://orbilu.uni.lu/handle/10993/50825
http://orbilu.uni.lu/bitstream/10993/50825/5/Table_4_Investigating%20Major%20Recurring%20Campylobacter%20jejuni%20Lineages%20in%20Luxembourg%20Using%20Four%20Core%20or%20Whole%20Genome%20Sequencing%20Typing%20Schemes.xlsx
http://orbilu.uni.lu/bitstream/10993/50825/4/Table_3_Investigating%20Major%20Recurring%20Campylobacter%20jejuni%20Lineages%20in%20Luxembourg%20Using%20Four%20Core%20or%20Whole%20Genome%20Sequencing%20Typing%20Schemes.xlsx
http://orbilu.uni.lu/bitstream/10993/50825/3/Table_2_Investigating%20Major%20Recurring%20Campylobacter%20jejuni%20Lineages%20in%20Luxembourg%20Using%20Four%20Core%20or%20Whole%20Genome%20Sequencing%20Typing%20Schemes.xlsx
http://orbilu.uni.lu/bitstream/10993/50825/2/Table_1_Investigating%20Major%20Recurring%20Campylobacter%20jejuni%20Lineages%20in%20Luxembourg%20Using%20Four%20Core%20or%20Whole%20Genome%20Sequencing%20Typing%20Schemes.docx
http://orbilu.uni.lu/bitstream/10993/50825/1/fcimb-10-608020.pdf

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13

Electronic Resource

Valley fever: finding new places for an old disease: Coccidioides immitis found in Washington State soil associated with recent human infection.

المؤلفون: Litvintseva, Anastasia, Litvintseva, Anastasia, Marsden-Haug, Nicola, Hurst, Steven, Hill, Heather, Gade, Lalitha, Driebe, Elizabeth, Ralston, Cindy, Roe, Chandler, Barker, Bridget, Goldoft, Marcia, Keim, Paul, Wohrle, Ron, Thompson, George, Engelthaler, David, Brandt, Mary, Chiller, Tom

المصدر: Clinical Infectious Diseases; vol 60, iss 1

مصطلحات الفهرس: Coccidioides, WGS typing, soil detection, valley fever, Cluster Analysis, Coccidioidomycosis, DNA, Fungal, Endemic Diseases, Genome, Humans, Microbiological Techniques, Molecular Sequence Data, Real-Time Polymerase Chain Reaction, Sequence Analysis, Sequence Homology, Soil Microbiology, Washington, article

URL: https://escholarship.org/uc/item/7xv6z11w
https://escholarship.org/

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