المؤلفون: Schechter, Matthew S., Trigodet, Florian, Veseli, Iva A., Miller, Samuel E., Klein, Matthew L., Sever, Metehan, Maignien, Lois, Delmont, Tom O., Light, Samuel H., Eren, A. Murat

المصدر: bioRxiv (Cold Spring Harbor Laboratory) In Press

مصطلحات موضوعية: phylogeography, metagenomics, metagenome-assembled genomes, single amplified genomes

وصف الملف: application/pdf

Relation: https://archimer.ifremer.fr/doc/00933/104460/116595.pdf; https://archimer.ifremer.fr/doc/00933/104460/

الاتاحة: https://archimer.ifremer.fr/doc/00933/104460/116595.pdf
https://doi.org/10.1101/2025.01.15.633187
https://archimer.ifremer.fr/doc/00933/104460/

المؤلفون: Fogarty, Emily C., Schechter, Matthew S., Lolans, Karen, Sheahan, Madeline L., Veseli, Iva, Moore, Ryan M., Kiefl, Evan, Moody, Thomas, Rice, Phoebe A., Yu, Michael K., Mimee, Mark, Chang, Eugene B., Ruscheweyh, Hans-Joachim, id_orcid:0 000-0001-7473-6086, Sunagawa, Shinichi, id_orcid:0 000-0003-3065-0314, Mclellan, Sandra L., Willis, Amy D., Comstock, Laurie E., Eren, A. Murat

المصدر: Cell, 187 (5)

مصطلحات موضوعية: plasmid, cryptic, metagenomics, horizontal gene transfer, mobile genetic element, inflammatory bowel disease, Bacteroides, sewage, human gut microbiome

وصف الملف: application/application/pdf

Relation: info:eu-repo/semantics/altIdentifier/wos/001209759600001; info:eu-repo/grantAgreement/SNF/NCCR (NFS)/-180575; http://hdl.handle.net/20.500.11850/671459

الاتاحة: https://hdl.handle.net/20.500.11850/671459
https://doi.org/10.3929/ethz-b-000671459

المؤلفون: Pfister, Catherine, A, Cardini, Ulisse, Mirasole, Alice, Montilla, Luis, M, Veseli, Iva, Gattuso, Jean-Pierre, Teixido, Nuria

المساهمون: Stazione Zoologica Anton Dohrn (SZN), Laboratoire d'océanographie de Villefranche (LOV), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de la Mer de Villefranche (IMEV), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Institute for Sustainable Development and International Relations, Sciences Po (Sciences Po), ANR-17-MPGA-0001,4Oceans,Predicting future oceans under(2017)

المصدر: ISSN: 2045-2322.

مصطلحات موضوعية: [SDE.BE]Environmental Sciences/Biodiversity and Ecology

الاتاحة: https://hal.science/hal-04308981
https://hal.science/hal-04308981v1/document
https://hal.science/hal-04308981v1/file/Pfisteretal%202023%20Microbial%20associates%20Posidonia%20Ischia%20Scie%20Reports.pdf
https://doi.org/10.1038/s41598-023-47126-4

المؤلفون: Watson, Andrea R., Füssel, Jessika, Veseli, Iva, DeLongchamp, Johanna Zaal, Silva, Marisela, Trigodet, Florian, Lolans, Karen, Shaiber, Alon, Fogarty, Emily, Runde, Joseph M., Quince, Christopher, Yu, Michael K., Söylev, Arda, Morrison, Hilary G., Lee, Sonny T. M., Kao, Dina, Rubin, David T., Jabri, Bana, Louie, Thomas, Eren, A. Murat

المساهمون: Gastro-Intestinal Research Foundation, Mutchnik Family Fund, Robert C. and Mary Jane Gallo Scholarship Fund, Alissa and Gianna Carlino Fellowship in Celiac Disease Research, Cancer Center Support Grant, Digestive Diseases Research Core Center, University of Chicago, National Science Foundation Graduate Research Fellowship

المصدر: Genome Biology ; volume 24, issue 1 ; ISSN 1474-760X

الاتاحة: http://dx.doi.org/10.1186/s13059-023-02924-x
https://link.springer.com/content/pdf/10.1186/s13059-023-02924-x.pdf
https://link.springer.com/article/10.1186/s13059-023-02924-x/fulltext.html

المؤلفون: Veseli, Iva, DeMers, Michelle A., Cooper, Zachary S., Schechter, Matthew S., Miller, Samuel, Weber, Laura, Smith, Christa B., Rodriguez, Lidimarie T., Schroer, William F., McIlvin, Matthew R., Lopez, Paloma Z., Saito, Makoto, Dyhrman, Sonya, Eren, A. Murat, Moran, Mary Ann, Braakman, Rogier

المصدر: Scientific Data; 9/4/2024, Vol. 11 Issue 1, p1-13, 13p

مصطلحات موضوعية: DATA integration, SCIENTIFIC models, PAN-genome, MARINE bacteria, MICROORGANISMS

المؤلفون: Fogarty, Emily C, Schechter, Matthew S, Lolans, Karen, Sheahan, Madeline L, Veseli, Iva, Moore, Ryan M, Kiefl, Evan, Moody, Thomas, Rice, Phoebe A, Yu, Michael K, Mimee, Mark, Chang, Eugene B, Ruscheweyh, Hans-Joachim, Sunagawa, Shinichi, Mclellan, Sandra L, Willis, Amy D, Comstock, Laurie E, Eren, A Murat

المصدر: EPIC3Cell, Elsevier, 187(5), pp. 1206-1222.e16, ISSN: 0092-8674

مصطلحات الفهرس: Article, peerRev

URL: https://epic.awi.de/id/eprint/58512/1/PIIS0092867424001077.pdf
https://epic.awi.de/id/eprint/58512/
https://hdl.handle.net/10013/epic.41f8282b-ce80-44a9-9f9f-b12ef8def8e7
http://dx.doi.org/10.1016/j.cell.2024.01.039
https://epic.awi.de/id/eprint/58512
https://hdl.handle.net/10013/epic.41f8282b-ce80-44a9-9f9f-b12ef8def8e7

المؤلفون: Miranda, Khashiff, Weigel, Brooke L., Fogarty, Emily C., Veseli, Iva A., Giblin, Anne E., Eren, A. Murat, Pfister, Catherine A.

المصدر: Miranda, K., Weigel, B., Fogarty, E., Veseli, I., Giblin, A., Eren, A., & Pfister, C. (2022). The diversity and functional capacity of microbes associated with coastal macrophytes. MSystems, 7(5), e0059222. ; doi:10.1128/msystems.00592-22

مصطلحات موضوعية: Host-microbiome relationships, Kelp, Macrophytes, Marine microbiology, Oxygen, Seagrass, Surfgrass

Relation: https://doi.org/10.1128/msystems.00592-22; Miranda, K., Weigel, B., Fogarty, E., Veseli, I., Giblin, A., Eren, A., & Pfister, C. (2022). The diversity and functional capacity of microbes associated with coastal macrophytes. MSystems, 7(5), e0059222.; https://hdl.handle.net/1912/29707

الاتاحة: https://hdl.handle.net/1912/29707

المؤلفون: Delmont, Tom O, Pierella Karlusich, Juan José, Veseli, Iva, Fuessel, Jessika, Eren, A Murat, Foster, Rachel A, Bowler, Chris, Wincker, Patrick, Pelletier, Eric

المصدر: The ISME Journal ; volume 16, issue 4, page 1203-1203 ; ISSN 1751-7362 1751-7370

الاتاحة: https://doi.org/10.1038/s41396-021-01173-9
https://www.nature.com/articles/s41396-021-01173-9.pdf
https://www.nature.com/articles/s41396-021-01173-9
https://academic.oup.com/ismej/article-pdf/16/4/1203/55311573/41396_2021_article_1173.pdf

المؤلفون: Delmont, Tom, Karlusich, Juan José Pierella, Veseli, Iva, Fuessel, Jessika, Eren, A. Murat, Foster, Rachel, Bowler, Chris, Wincker, Patrick, Pelletier, Eric

المساهمون: Génomique métabolique (UMR 8030), Genoscope - Centre national de séquençage Evry (GENOSCOPE), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Global Oceans Systems Ecology & Evolution - Tara Oceans (GOSEE), Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Aix Marseille Université (AMU)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Université de Toulon (UTLN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes 2016-2019 (UGA 2016-2019 )-Institut de Recherche pour le Développement (IRD Ile-de-France )-Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)-European Molecular Biology Laboratory (EMBL)-NANTES UNIVERSITÉ - École Centrale de Nantes (Nantes Univ - ECN), Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)-Université australe du Chili, Institut de biologie de l'ENS Paris (IBENS), Département de Biologie - ENS-PSL (IBENS), École normale supérieure - Paris (ENS-PSL), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), The University of Chicago Medicine Chicago, Stockholm University, ANR-11-BTBR-0008,OCEANOMICS,Biotechnologies et bioressources pour la valorisation des écosystèmes marins planctoniques(2011), ANR-10-INBS-0009,France Génomique,Organisation et montée en puissance d'une Infrastructure Nationale de Génomique(2010), ANR-10-LABX-0054,MEMOLIFE,Memory in living systems: an integrated approach(2010), ANR-11-IDEX-0001,Amidex,INITIATIVE D'EXCELLENCE AIX MARSEILLE UNIVERSITE(2011), ANR-16-CE01-0008,PHYTOMET,Étude métallomique du phytoplancton: effet de l'acidification des océans sur la séquestration du fer(2016), European Project: 835067,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),10.3030/835067,DIATOMIC(2019)

المصدر: ISSN: 1751-7362.

مصطلحات موضوعية: [SDE]Environmental Sciences

Relation: info:eu-repo/grantAgreement//835067/EU/Untangling eco-evolutionary impacts on diatom genomes over timescales relevant to current climate change/DIATOMIC; BIORXIV: 2021.03.24.436778

الاتاحة: https://cnrs.hal.science/hal-03480646
https://doi.org/10.1038/s41396-021-01135-1

المؤلفون: Eren, A. Murat, Kiefl, Evan, Shaiber, Alon, Veseli, Iva, Miller, Samuel E., Schechter, Matthew S., Fink, Isaac, Pan, Jessica N., Yousef, Mahmoud, Fogarty, Emily C., Trigodet, Florian, Watson, Andrea R., Esen, Ozcan C., Moore, Ryan M., Clayssen, Quentin, Lee, Michael D., Kivenson, Veronika, Graham, Elaina D., Merrill, Bryan D., Karkman, Antti, Blankenberg, Daniel, Eppley, John M., Sjodin, Andreas, Scott, Jarrod J., Vazquez-Campos, Xabier, McKay, Luke J., McDaniel, Elizabeth A., Stevens, Sarah L. R., Anderson, Rika E., Fuessel, Jessika, Fernandez-Guerra, Antonio, Maignien, Lois, Delmont, Tom O., Willis, Amy D.

المصدر: Eren , A M , Kiefl , E , Shaiber , A , Veseli , I , Miller , S E , Schechter , M S , Fink , I , Pan , J N , Yousef , M , Fogarty , E C , Trigodet , F , Watson , A R , Esen , O C , Moore , R M , Clayssen , Q , Lee , M D , Kivenson , V , Graham , E D , Merrill , B D , Karkman , A , Blankenberg , D , Eppley , J M ....

مصطلحات موضوعية: MICROBIAL GENOMES

الاتاحة: https://researchprofiles.ku.dk/da/publications/communityled-integrated-reproducible-multiomics-with-anvio(de193b41-4a32-40fd-8b4b-5933a152e091).html
https://doi.org/10.1038/s41564-020-00834-3
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8116326/pdf/nihms-1700564.pdf

المؤلفون: Eren, A. Murat, Veseli, Iva, Miller, Samuel, Trigodet, Florian, Schechter, Matthew, Delmont, Tom O.

مصطلحات موضوعية: Ecology, Microbiology, Prokaryotic genomes, Evolutionary biology, Viral genomes

Relation: https://pubmed.ncbi.nlm.nih.gov/33349678; https://pubmed.ncbi.nlm.nih.gov/26500826; https://doi.org/10.5281/zenodo.13762895; https://doi.org/10.5281/zenodo.13762896; oai:zenodo.org:13762896

الاتاحة: https://doi.org/10.5281/zenodo.13762896

المؤلفون: Eren, A. Murat, Kiefl, Evan, Shaiber, Alon, Veseli, Iva, Miller, Samuel E., Schechter, Matthew S., Fink, Isaac, Pan, Jessica N., Yousef, Mahmoud, Fogarty, Emily C., Trigodet, Florian, Watson, Andrea R., Esen, Ozcan C., Moore, Ryan M., Clayssen, Quentin, Lee, Michael D., Kivenson, Veronika, Graham, Elaina D., Merrill, Bryan D., Karkman, Antti, Blankenberg, Daniel, Eppley, John M., Sjodin, Andreas, Scott, Jarrod J., Vazquez-Campos, Xabier, McKay, Luke J., McDaniel, Elizabeth A., Stevens, Sarah L.R., Anderson, Rika E., Fuessel, Jessika, Fernandez-Guerra, Antonio, Maignien, Lois, Delmont, Tom O., Willis, Amy D.

وصف الملف: application/pdf

Relation: Eren, A. M., Kiefl, E., Shaiber, A., Veseli, I., Miller, S. E., Schechter, M. S., . & Willis, A. D. (2021). Community-led, integrated, reproducible multi-omics with anvi’o. Nature microbiology, 6(1), 3-6.; https://scholarworks.montana.edu/xmlui/handle/1/16825

الاتاحة: https://scholarworks.montana.edu/xmlui/handle/1/16825

المؤلفون: Veseli, Iva, Chen, Yiqun T, Schechter, Matthew S, Vanni, Chiara, Fogarty, Emily C, Watson, Andrea R, Jabri, Bana, Blekhman, Ran, Willis, Amy D, Yu, Michael K, Fernàndez-Guerra, Antonio, Füssel, Jessika, Eren, A Murat

المصدر: EPIC3eLife, eLife Sciences Publications, 4(06-07), pp. 2023.05.10.540289-2023.05.10.540289, ISSN: 2050-084X

مصطلحات الفهرس: Article, peerRev

URL: https://epic.awi.de/id/eprint/58518/1/89862-v1.pdf
https://epic.awi.de/id/eprint/58518/
https://hdl.handle.net/10013/epic.5812ff84-0c32-4a74-a9ad-84081f35ed61
http://dx.doi.org/10.1101/2023.05.10.540289
https://epic.awi.de/id/eprint/58518
https://hdl.handle.net/10013/epic.5812ff84-0c32-4a74-a9ad-84081f35ed61

المؤلفون: Watson, Andrea R, Füssel, Jessika, Veseli, Iva, DeLongchamp, Johanna Zaal, Silva, Marisela, Trigodet, Florian, Lolans, Karen, Shaiber, Alon, Fogarty, Emily, Runde, Joseph M, Quince, Christopher, Yu, Michael K, Söylev, Arda, Morrison, Hilary G, Lee, Sonny TM, Kao, Dina, Rubin, David T, Jabri, Bana, Louie, Thomas, Eren, A Murat

المصدر: EPIC3Genome Biology, Springer Nature, 24(1), pp. 78-78, ISSN: 1474-760X

مصطلحات الفهرس: Article, peerRev

URL: https://epic.awi.de/id/eprint/58517/1/s13059-023-02924-x.pdf
https://epic.awi.de/id/eprint/58517/
https://hdl.handle.net/10013/epic.5368cb4d-25eb-4bfc-ad2c-4244fb594980
http://dx.doi.org/10.1186/s13059-023-02924-x
https://epic.awi.de/id/eprint/58517
https://hdl.handle.net/10013/epic.5368cb4d-25eb-4bfc-ad2c-4244fb594980

المؤلفون: Miranda, Khashiff, Weigel, Brooke L., Fogarty, Emily C., Veseli, Iva A., Giblin, Anne E., Eren, A. Murat, Pfister, Catherine A.

مصطلحات الفهرس: Host-microbiome relationships, Kelp, Macrophytes, Marine microbiology, Oxygen, Seagrass, Surfgrass, Article

URL: https://hdl.handle.net/1912/29707
https://doi.org/10.1128/msystems.00592-22
https://doi.org/10.1128/msystems.00592-22

المؤلفون: Sun, Yukun, Veseli, Iva A., Vaillancourt, Katy, Frenette, Michel, Grenier, Daniel, Pombert, Jean-François

المساهمون: Cloeckaert, Axel

المصدر: PLOS ONE ; volume 14, issue 4, page e0216002 ; ISSN 1932-6203

الاتاحة: http://dx.doi.org/10.1371/journal.pone.0216002
http://dx.plos.org/10.1371/journal.pone.0216002

المؤلفون: Rocha, Manuel, Reyer, Matt, Alvarado, Walter, Glauninger, Hendrik, Hoinville, Megan, Kroll, Kourtney, MacDonald, Margo, Rouviere, Eric, Schnitkey, Diane, Veseli, Iva, Wasserman, Steven, Prince, Victoria, Hammond, Adam

المصدر: Biophysical Journal ; volume 116, issue 3, page 425a-426a ; ISSN 0006-3495

الاتاحة: http://dx.doi.org/10.1016/j.bpj.2018.11.2291
https://api.elsevier.com/content/article/PII:S0006349518335562?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0006349518335562?httpAccept=text/plain

المؤلفون: Runde, Joseph, Veseli, Iva, Fogarty, Emily C., Watson, Andrea R., Clayssen, Quentin, Yosef, Mahmoud, Shaiber, Alon, Verma, Ritu, Quince, Christopher, Gerasimidis, Konstantinos, Rubin, David T., Eren, A. Murat

Relation: Runde, Joseph, Veseli, Iva, Fogarty, Emily C., Watson, Andrea R., Clayssen, Quentin, Yosef, Mahmoud, Shaiber, Alon, Verma, Ritu, Quince, Christopher, Gerasimidis, Konstantinos, Rubin, David T. and Eren, A. Murat (2023) Transient suppression of bacterial populations associated with gut health is critical in success of exclusive enteral nutrition for children with Crohn's disease. Journal of Crohn's and Colitis, 17 (7). pp. 1103-1113. ISSN 1873-9946

الاتاحة: https://ueaeprints.uea.ac.uk/id/eprint/97860/
https://doi.org/10.1093/ecco-jcc/jjad031

المؤلفون: Veseli, Iva Annamaria

المصدر: http://knowledge.uchicago.edu/record/7627.

Relation: https://knowledge.uchicago.edu/record/7627/files/Veseli_uchicago_0330D_16795.pdf; http://knowledge.uchicago.edu/record/7627

الاتاحة: https://doi.org/10.6082/uchicago.7627
http://knowledge.uchicago.edu/record/7627

المؤلفون: Watson, Andrea R., Füssel, Jessika, Veseli, Iva, DeLongchamp, Johanna Zaal, Silva, Marisela, Trigodet, Florian, Lolans, Karen, Shaiber, Alon, Fogarty, Emily, Runde, Joseph M., Quince, Christopher, Yu, Michael K., Söylev, Arda, Morrison, Hilary G., Lee, Sonny T. M., Kao, Dina, Rubin, David T., Jabri, Bana, Louie, Thomas, Eren, A. Murat

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c3fd5af3c16abfedbfbf4db0391b4e7