المؤلفون: Alice Antonello, Riccardo Bergamin, Nicola Calonaci, Jacob Househam, Salvatore Milite, Marc J. Williams, Fabio Anselmi, Alberto d’Onofrio, Vasavi Sundaram, Alona Sosinsky, William C. H. Cross, Giulio Caravagna

المصدر: Genome Biology, Vol 25, Iss 1, Pp 1-40 (2024)

مصطلحات موضوعية: Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/58afabce18a849ecb410852f49a33e9f

المؤلفون: Erica C. Pehrsson, Mayank N. K. Choudhary, Vasavi Sundaram, Ting Wang

المصدر: Nature Communications, Vol 10, Iss 1, Pp 1-16 (2019)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/9be8243c98f04693903b38c681d2a1b9

المؤلفون: Wayne A. Warner, Tammy Y. Lee, Kimberly Badal, Tanisha M. Williams, Smriti Bajracharya, Vasavi Sundaram, Nigel A. Bascombe, Ravi Maharaj, Marjorie Lamont-Greene, Allana Roach, Melissa Bondy, Matthew J. Ellis, Timothy R. Rebbeck, Simeon Slovacek, Jingqin Luo, Adetunji T. Toriola, Adana A. M. Llanos

المصدر: BMC Cancer, Vol 18, Iss 1, Pp 1-12 (2018)

مصطلحات موضوعية: Trinidad and Tobago, Caribbean, Cancer incidence, Cancer mortality, Cancer surveillance, Cancer in populations of African ancestry, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

وصف الملف: electronic resource

Relation: http://link.springer.com/article/10.1186/s12885-018-4625-x; https://doaj.org/toc/1471-2407

URL الوصول: https://doaj.org/article/41940c91c9b349779d960cfda4d522f3

المؤلفون: Vasavi Sundaram, Mayank N. K. Choudhary, Erica Pehrsson, Xiaoyun Xing, Christopher Fiore, Manishi Pandey, Brett Maricque, Methma Udawatta, Duc Ngo, Yujie Chen, Asia Paguntalan, Tammy Ray, Ava Hughes, Barak A. Cohen, Ting Wang

المصدر: Nature Communications, Vol 8, Iss 1, Pp 1-12 (2017)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/9182e1481f7b4fb78384a75c96e24065

المؤلفون: Oriol Pich, Juliet Luft, Michael Nicholson, Sarah Aitken, Paul Ginno, Vasavi Sundaram, Martin Taylor, Craig Anderson

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::32bdd7a1e1d1d95320de70e963634c9f
https://doi.org/10.1101/2022.06.10.495644

المؤلفون: Alan Y. Du, Xiaoyu Zhuo, Vasavi Sundaram, Nicholas O. Jensen, Hemangi G. Chaudhari, Nancy L. Saccone, Barak A. Cohen, Ting Wang

المصدر: Genome research. 32(10)

مصطلحات موضوعية: Transcription Factor AP-1, Evolution, Molecular, Enhancer Elements, Genetic, Genome, Human, Genetics, DNA Transposable Elements, Terminal Repeat Sequences, Humans, Regulatory Sequences, Nucleic Acid, Genetics (clinical)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::75200132c1fa4e47d36370bc33d83967
https://pubmed.ncbi.nlm.nih.gov/36192170

المؤلفون: Alan Y. Du, Xiaoyu Zhuo, Vasavi Sundaram, Nicholas O. Jensen, Hemangi G. Chaudhari, Nancy L. Saccone, Barak A. Cohen, Ting Wang

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::db14ea1dcf31868b4879c36a3c04072f
https://doi.org/10.1101/2022.03.16.483999

المؤلفون: Mayank N. K. Choudhary, Vasavi Sundaram, Erica C. Pehrsson, Ting Wang

المصدر: Nature Communications, Vol 10, Iss 1, Pp 1-16 (2019)
Nature Communications

مصطلحات موضوعية: Epigenomics, 0301 basic medicine, Aging, Bioinformatics, Science, General Physics and Astronomy, Alu element, Biology, Article, General Biochemistry, Genetics and Molecular Biology, Epigenesis, Genetic, Evolution, Molecular, Epigenome, Mice, 03 medical and health sciences, 0302 clinical medicine, Alu Elements, Animals, Humans, Epigenetics, lcsh:Science, Conserved Sequence, Epigenesis, Regulation of gene expression, Multidisciplinary, food and beverages, Molecular Sequence Annotation, General Chemistry, Gene regulation, 030104 developmental biology, Organ Specificity, Evolutionary biology, DNA methylation, DNA Transposable Elements, lcsh:Q, Human genome, Growth and Development, Epigenetics analysis, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9d575ca7042adbca090476d1a1fcf540
https://doaj.org/article/9be8243c98f04693903b38c681d2a1b9

المؤلفون: Alice Antonello, Riccardo Bergamin, Nicola Calonaci, Jacob Househam, Salvatore Milite, Marc J Williams, Fabio Anselmi, Alberto d’Onofrio, Vasavi Sundaram, Alona Sosinsky, William CH Cross, Giulio Caravagna

مصطلحات موضوعية: Whole genome sequencing, Computer science, media_common.quotation_subject, Point mutation, Cancer, Computational biology, medicine.disease, DNA sequencing, Data quality, Mutation (genetic algorithm), medicine, Quality (business), Allele specific, media_common

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::90bf93d9fcbccdf1f2ea0af71003300a
https://doi.org/10.1101/2021.02.13.429885

المؤلفون: Veronica Roach, Adana A.M. Llanos, Ravi Maharaj, Krishan Ramsoobhag, Marjorie Lamont-Greene, Wayne A. Warner, Smriti Bajracharya, Camille Ragin, Vasavi Sundaram, Vandana Devika Sookdeo, Kimberly Badal, Tammy Y. Lee, Fang Fang, Bettina F. Drake, Simeon Slovacek, Jasmine Brown, Timothy R. Rebbeck

المصدر: Cancer Causes & Control

مصطلحات موضوعية: Male, 0301 basic medicine, Cancer Research, medicine.medical_specialty, Population, Developing country, Cancer mortality, 03 medical and health sciences, Prostate cancer, 0302 clinical medicine, Epidemiology, medicine, Humans, education, Developing Countries, Aged, Caribbean, Original Paper, education.field_of_study, Geography, business.industry, Incidence, Mortality rate, Incidence (epidemiology), Prostatic Neoplasms, Cancer, Middle Aged, medicine.disease, Cancer survival, 3. Good health, Cancer registry, Trinidad and Tobago, 030104 developmental biology, Oncology, 030220 oncology & carcinogenesis, business, Cancer incidence, Cancer in populations of African ancestry, Demography

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6e09c882d3f1fa65570c0a73dc70f295
https://doi.org/10.1007/s10552-018-1038-8

المؤلفون: Christopher Fiore, Tammy Ray, Barak A. Cohen, Brett B Maricque, Erica C. Pehrsson, Mayank N. K. Choudhary, Ting Wang, Vasavi Sundaram, Ava Hughes, Manishi Pandey, Yujie Chen, Xiaoyun Xing, Methma Udawatta, Duc Ngo, Asia Paguntalan

المصدر: Nature Communications, Vol 8, Iss 1, Pp 1-12 (2017)
Nature Communications

مصطلحات موضوعية: 0301 basic medicine, Transposable element, Science, General Physics and Astronomy, Endogenous retrovirus, Computational biology, Biology, Genome, General Biochemistry, Genetics and Molecular Biology, Article, Gene Expression Regulation, Enzymologic, Evolution, Molecular, 03 medical and health sciences, Mice, Animals, Enhancer, Gene, Transcription factor, Embryonic Stem Cells, Cis-regulatory module, Genetics, Multidisciplinary, Terminal Repeat Sequences, food and beverages, General Chemistry, 3. Good health, 030104 developmental biology, Regulatory sequence, DNA Transposable Elements, Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d0372f5603174f82968cda97d12a407c
https://doaj.org/article/9182e1481f7b4fb78384a75c96e24065

المؤلفون: Joanna Wysocka, Vasavi Sundaram

المصدر: Philosophical Transactions of the Royal Society B: Biological Sciences

مصطلحات موضوعية: Transposable element, Gene regulatory network, transposons, Computational biology, Review Article, Biology, Genome, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Animals, Humans, Enhancer, 030304 developmental biology, hourglass model and gene regulation, Regulation of gene expression, Mammals, 0303 health sciences, food and beverages, Promoter, Articles, transcription factor binding, Gene Expression Regulation, Regulatory sequence, DNA Transposable Elements, Human genome, enhancers, General Agricultural and Biological Sciences, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b24a3bf5c5079d3186d7be735658c14d
http://europepmc.org/articles/PMC7061989

المؤلفون: Robert J.A. Bell, Vasavi Sundaram, Aaron Diaz, Joseph F. Costello, Ting Wang, Pamela L. Paris, Raman P. Nagarajan, Brett E. Johnson, Bo Zhang, Adam B. Olshen, Ashley E. Graham, Daofeng Li, Jun S. Song, Ivan Smirnov, Shaun D. Fouse

المصدر: Genome research, vol 24, iss 5

مصطلحات موضوعية: medicine.disease_cause, Medical and Health Sciences, Epigenesis, Genetic, Stem Cell Research - Nonembryonic - Human, Promoter Regions, Genetic, Telomerase, Genetics (clinical), Cancer, Regulation of gene expression, Nuclear Proteins, Biological Sciences, Gene Expression Regulation, Neoplastic, DNA-Binding Proteins, Histone, CpG site, DNA methylation, Transcriptional Activation, Bioinformatics, Kruppel-Like Transcription Factors, Nerve Tissue Proteins, Biology, Promoter Regions, Rare Diseases, Genetic, Zinc Finger Protein Gli3, Genetics, medicine, Humans, Neoplastic, Research, Tumor Suppressor Proteins, Human Genome, Neurosciences, Tumor Protein p73, Promoter, DNA Methylation, Stem Cell Research, Brain Disorders, Brain Cancer, Gene Expression Regulation, Mutation, Cancer research, biology.protein, H3K4me3, CpG Islands, Glioblastoma, Carcinogenesis, Epigenesis, DNA hypomethylation

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::108848ccaf1f8631cc48b2ea10fdd7e9
https://doi.org/10.1101/gr.164707.113

المؤلفون: Ginell Elliott, Taoping Shi, Junchen Gu, Marco A. Marra, Philippe Gascard, Yan Zhou, Xiaoyun Xing, Daofeng Li, Chibo Hong, Angela Tam, Joseph F. Costello, Ting Wang, Pamela A. F. Madden, Nan Lin, Bo Zhang, Hyung Joo Lee, Michael Stevens, Peggy J. Farnham, Theresa A. Kadlecek, Henriette O'Geen, Baoxue Zhang, Arthur Weiss, Jia Zhou, Thea D. Tlsty, Martin Hirst, Vasavi Sundaram, Richard A. Moore, Raman P. Nagarajan, Keith L. Ligon, Jeffrey B. Cheng, Mahvash Sigaroudinia, Cecile L. Maire, Rebecca F. Lowdon

المصدر: Genome Research. 23:1522-1540

مصطلحات موضوعية: Genetics, Genome, Human, genetic processes, Bisulfite sequencing, Method, High-Throughput Nucleotide Sequencing, Sequence Analysis, DNA, DNA Methylation, Biology, Differentially methylated regions, Organ Specificity, Data Interpretation, Statistical, DNA methylation, Humans, Illumina Methylation Assay, natural sciences, Methylated DNA immunoprecipitation, Epigenetics, RNA-Directed DNA Methylation, Algorithms, Genetics (clinical), Epigenomics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5534423fa2b10bd310455e5d9b7fb3e0
https://doi.org/10.1101/gr.156539.113

المؤلفون: Vasavi Sundaram, Ting Wang

المصدر: BioEssays. 40:1700155

مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Transposable element, Gene regulatory network, Context (language use), Computational biology, Biology, ENCODE, Genome, Article, General Biochemistry, Genetics and Molecular Biology, Evolution, Molecular, 03 medical and health sciences, Genes, Regulator, Humans, Gene Regulatory Networks, Gene, Regulation of gene expression, Binding Sites, Genome, Human, food and beverages, Phenotype, 030104 developmental biology, Gene Expression Regulation, DNA Transposable Elements, Function (biology), Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6981d80642b80356b8d6fbde59d5c853
https://doi.org/10.1002/bies.201700155

المؤلفون: Vasavi Sundaram, Ting Wang, Ghia Euskirchen, Zhihai Ma, Anshul Kundaje, Axel Visel, Yong Cheng, Shin Lin, Yiing Lin, Xiaoyun Xing, Zhiping Weng, Bong Hyun Kim, Ross C. Hardison, Xinqiong Yang, Alan P. Boyle, Len A. Pennacchio, Nergiz Dogan, Weisheng Wu, Trupti Kawli, Cheryl A. Keller, Jingjing Li, Philip Cayting, Dorrelyn Patacsil, Belinda Giardine, Michael Snyder

مصطلحات موضوعية: Genetics, Regulation of gene expression, Multidisciplinary, Genome, Promoter, Computational biology, Genomics, Biology, Regulatory Sequences, Nucleic Acid, Polymorphism, Single Nucleotide, Article, Chromatin, Conserved sequence, Cell Line, Mice, Enhancer Elements, Genetic, Regulatory sequence, DNA methylation, Animals, Humans, Enhancer, Gene, Transcription factor, Conserved Sequence, Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a1a60c6f479c5970d824240e5f3367a8
https://europepmc.org/articles/PMC4343047/

المؤلفون: Daofeng Li, Ting Wang, Michael Snyder, Vasavi Sundaram, Yong Cheng, Peter Edge, Xiaoyun Xing, Zhihai Ma

المصدر: Genome research. 24(12)

مصطلحات موضوعية: Epigenomics, Chromatin Immunoprecipitation, Cell Line, Evolution, Molecular, Mice, Genetics, Animals, Humans, Position-Specific Scoring Matrices, Gene Regulatory Networks, Epigenetics, Nucleotide Motifs, Gene, Genetics (clinical), Binding Sites, biology, Research, food and beverages, High-Throughput Nucleotide Sequencing, Chromatin, DNA binding site, Histone, Organ Specificity, Multigene Family, DNA methylation, biology.protein, DNA Transposable Elements, Chromatin immunoprecipitation, Protein Binding, Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6664f300115c332b948f0a9b53504a8a
https://pubmed.ncbi.nlm.nih.gov/25319995

المؤلفون: Bo Zhang, Ting Wang, Xiao Yun Xing, Jing Li, Katherine B. Chiappinelli, Paul J. Goodfellow, David G. Mutch, Rebecca F. Lowdon, Nan Lin, Vasavi Sundaram, Ian S. Hagemann, Baoxue Zhang, Yan Zhou

المصدر: BMC Genomics

مصطلحات موضوعية: Kruppel-Like Transcription Factors, Biology, Polymorphism, Single Nucleotide, Aldehyde Dehydrogenase 1 Family, Kruppel-Like Factor 4, Genetics, Humans, DNA (Cytosine-5-)-Methyltransferases, Methylated DNA immunoprecipitation, Promoter Regions, Genetic, Enhancer, Adaptor Proteins, Signal Transducing, Chromosomes, Human, X, Nuclear Proteins, Retinal Dehydrogenase, Promoter, Sequence Analysis, DNA, Methylation, DNA Methylation, Molecular biology, Carcinoma, Papillary, Endometrial Neoplasms, 3. Good health, Enhancer Elements, Genetic, Differentially methylated regions, CpG site, Uterine Neoplasms, DNA methylation, DNA Transposable Elements, CpG Islands, Female, RNA, Long Noncoding, DNA microarray, MutL Protein Homolog 1, Research Article, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8bd70feee15300782b2cb5513e0a3e8c
https://doi.org/10.1186/1471-2164-15-868

المؤلفون: Daofeng Li, Peggy J. Farnham, Ting Wang, Brian C. Koebbe, Cydney B. Nielsen, David Haussler, Robert M. Kuhn, Eric A Martin, Brett B Maricque, Xin Zhou, Ivan Smirnov, Mingchao Xie, Joseph F. Costello, Pamela A. F. Madden, Jingchun Zhu, Vasavi Sundaram, W. James Kent, Martin Hirst

المصدر: Nature Methods. 8:989-990

مصطلحات موضوعية: Epigenomics, Washington, Internet, Universities, business.industry, MEDLINE, Cell Biology, Epigenome, Biology, Biochemistry, Research Personnel, Article, World Wide Web, Databases, Genetic, Humans, The Internet, business, Molecular Biology, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e89a2d209de28e99873513651a54e352
https://doi.org/10.1038/nmeth.1772

المؤلفون: Katherine B. Chiappinelli, Vasavi Sundaram, Paul J. Goodfellow, Mingchao Xie, Bo Zhang, Ting Wang

المصدر: Cancer Research. 72:LB-379

مصطلحات موضوعية: Transposable element, Genetics, Regulation of gene expression, Cancer Research, Oncology, Endometrial cancer, medicine, Epigenetics, Biology, medicine.disease

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::8939fff90b7ca2824be71d2eb3ca0657
https://doi.org/10.1158/1538-7445.am2012-lb-379