المؤلفون: Campos-León, Karen, Ferguson, Jack, Günther, Thomas, Wood, C. David, Wingett, Steven W., Pekel, Selin, Varghese, Christy S., Jones, Leanne S., Stockton, Joanne D., Várnai, Csilla, West, Michelle J., Beggs, Andrew, Grundhoff, Adam, Noyvert, Boris, Roberts, Sally, Parish, Joanna L.

المصدر: PLoS Pathogens; 1/27/2025, Vol. 21 Issue 1, p1-25, 25p

مصطلحات موضوعية: CELL adhesion molecules, GENE expression, SUPPRESSOR cells, HUMAN papillomavirus, BINDING sites

المؤلفون: Davolio, Anthony J, J Jankowski, Wojciech, Várnai, Csilla, Irwin, Benedict WJ, Payne, Michael C, Chau, Pak-Lee

مصطلحات موضوعية: 3404 Medicinal and Biomolecular Chemistry, 34 Chemical Sciences

وصف الملف: application/pdf

Relation: https://www.repository.cam.ac.uk/handle/1810/365211

الاتاحة: https://www.repository.cam.ac.uk/handle/1810/365211

المؤلفون: Jessberger, Gregor, Várnai, Csilla, Stocsits, Roman R., Tang, Wen, Stary, Georg, Peters, Jan-Michael

مصطلحات موضوعية: RESEARCH

وصف الملف: text/html

Relation: http://genome.cshlp.org/cgi/content/short/33/12/2094; http://dx.doi.org/10.1101/gr.277865.123

الاتاحة: http://genome.cshlp.org/cgi/content/short/33/12/2094
https://doi.org/10.1101/gr.277865.123

المؤلفون: Mielczarek, Olga, Rogers, Carolyn H., Zhan, Yinxiu, Matheson, Louise S., Stubbington, Michael J.T., Schoenfelder, Stefan, Bolland, Daniel J., Javierre, Biola M., Wingett, Steven W., Várnai, Csilla, Segonds-Pichon, Anne, Conn, Simon J., Krueger, Felix, Andrews, Simon, Fraser, Peter, Giorgetti, Luca, Corcoran, Anne E.

المصدر: Cell Reports ; volume 42, issue 9, page 113074 ; ISSN 2211-1247

الاتاحة: http://dx.doi.org/10.1016/j.celrep.2023.113074
https://api.elsevier.com/content/article/PII:S2211124723010859?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2211124723010859?httpAccept=text/plain

المؤلفون: Davolio, Anthony J., J. Jankowski, Wojciech, Várnai, Csilla, Irwin, Benedict W. J., Payne, Michael C., Chau, Pak-Lee

المساهمون: Trinity College, University of Cambridge

المصدر: ACS Omega ; volume 8, issue 47, page 44537-44544 ; ISSN 2470-1343 2470-1343

الاتاحة: http://dx.doi.org/10.1021/acsomega.3c03503
https://pubs.acs.org/doi/pdf/10.1021/acsomega.3c03503

المؤلفون: Várnai, Csilla

مصطلحات موضوعية: 620

الاتاحة: http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.609933

المؤلفون: Millen, Gerard Cathal, Arnold, Roland, Cazier, Jean-Baptiste, Curley, Helen, Feltbower, Richard, Gamble, Ashley, Glaser, Adam, Grundy, Richard G, Kirton, Laura, Lee, Lennard Y W, McCabe, Martin G, Palles, Claire, Phillips, Bob, Stiller, Charles A, Varnai, Csilla, Kearns, Pamela

المصدر: Millen , G C , Arnold , R , Cazier , J-B , Curley , H , Feltbower , R , Gamble , A , Glaser , A , Grundy , R G , Kirton , L , Lee , L Y W , McCabe , M G , Palles , C , Phillips , B , Stiller , C A , Varnai , C & Kearns , P 2022 , ' COVID-19 in children with haematological malignancies ' , Archives of Disease in Childhood , vol. 107 , no. 2 , pp. 186-188 . https://doi.org/10.1136/archdischild-2021-322062

مصطلحات موضوعية: Adolescent, COVID-19/diagnosis, Child, Preschool, Cohort Studies, Female, Hematologic Neoplasms/epidemiology, Humans, Infant, Male, Risk Assessment/statistics & numerical data, Risk Factors, SARS-CoV-2/immunology, Severity of Illness Index, ResearchInstitutes_Networks_Beacons/mcrc, Manchester Cancer Research Centre

الاتاحة: https://research.manchester.ac.uk/en/publications/f3e81799-df07-42e3-aee8-65406927e56d
https://doi.org/10.1136/archdischild-2021-322062

المؤلفون: Baranasic, Damir, Hörtenhuber, Matthias, Balwierz, Piotr J., Zehnder, Tobias, Mukarram, Abdul Kadir, Nepal, Chirag, Várnai, Csilla, Hadzhiev, Yavor, Jimenez-Gonzalez, Ada, Li, Nan, Wragg, Joseph, D'Orazio, Fabio M., Relic, Dorde, Pachkov, Mikhail, Díaz, Noelia, Hernández-Rodríguez, Benjamín, Chen, Zelin, Stoiber, Marcus, Dong, Michaël, Stevens, Irene, Ross, Samuel E., Eagle, Anne, Martin, Ryan, Obasaju, Oluwapelumi, Rastegar, Sepand, McGarvey, Alison C., Kopp, Wolfgang, Chambers, Emily, Wang, Dennis, Kim, Hyejeong R., Acemel, Rafael D., Naranjo, Silvia, Łapiński, Maciej, Chong, Vanessa, Mathavan, Sinnakaruppan, Peers, Bernard, Sauka-Spengler, Tatjana, Vingron, Martin, Carninci, Piero, Ohler, Uwe, Lacadie, Scott Allen, Burgess, Shawn M., Winata, Cecilia, van Eeden, Freek, Vaquerizas, Juan M., Gómez-Skarmeta, José Luis, Onichtchouk, Daria, Brown, Ben James, Bogdanovic, Ozren, van Nimwegen, Erik, Westerfield, Monte, Wardle, Fiona C., Daub, Carsten O., Lenhard, Boris, Müller, Ferenc

وصف الملف: application/pdf

Relation: https://edoc.unibas.ch/89500/1/s41588-022-01089-w.pdf; Baranasic, Damir and Hörtenhuber, Matthias and Balwierz, Piotr J. and Zehnder, Tobias and Mukarram, Abdul Kadir and Nepal, Chirag and Várnai, Csilla and Hadzhiev, Yavor and Jimenez-Gonzalez, Ada and Li, Nan and Wragg, Joseph and D'Orazio, Fabio M. and Relic, Dorde and Pachkov, Mikhail and Díaz, Noelia and Hernández-Rodríguez, Benjamín and Chen, Zelin and Stoiber, Marcus and Dong, Michaël and Stevens, Irene and Ross, Samuel E. and Eagle, Anne and Martin, Ryan and Obasaju, Oluwapelumi and Rastegar, Sepand and McGarvey, Alison C. and Kopp, Wolfgang and Chambers, Emily and Wang, Dennis and Kim, Hyejeong R. and Acemel, Rafael D. and Naranjo, Silvia and Łapiński, Maciej and Chong, Vanessa and Mathavan, Sinnakaruppan and Peers, Bernard and Sauka-Spengler, Tatjana and Vingron, Martin and Carninci, Piero and Ohler, Uwe and Lacadie, Scott Allen and Burgess, Shawn M. and Winata, Cecilia and van Eeden, Freek and Vaquerizas, Juan M. and Gómez-Skarmeta, José Luis and Onichtchouk, Daria and Brown, Ben James and Bogdanovic, Ozren and van Nimwegen, Erik and Westerfield, Monte and Wardle, Fiona C. and Daub, Carsten O. and Lenhard, Boris and Müller, Ferenc. (2022) Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements. Nature Genetics, 54 (7). pp. 1037-1050.; info:pmid/35789323; urn:ISSN:1061-4036; urn:ISSN:1546-1718

الاتاحة: https://edoc.unibas.ch/89500/
https://edoc.unibas.ch/89500/1/s41588-022-01089-w.pdf
https://doi.org/10.1038/s41588-022-01089-w

المؤلفون: Várnai, Csilla, Palles, Claire, Arnold, Roland, Curley, Helen M, Purshouse, Karin, Cheng, Vinton WT, Booth, Stephen, Campton, Naomi A, Collins, Graham P, Hughes, Daniel J, Kulasekararaj, Austin G, Lee, Alvin JX, Olsson-Brown, Anna C, Sharma-Oates, Archana, Van Hemelrijck, Mieke, Lee, Lennard YW, Kerr, Rachel, Middleton, Gary, Cazier, Jean-Baptiste, Pugh, Sian, Corrie, Pippa, Bedair, Ahmed, Hewish, Madeleine, Leonard, Pauline, Illingworth, Jack, Hibbs, Stephen, Diamantis, Nicolaos, Massalha, Samah, Fuller, Claire, Usbourne, Caroline, Gilbert, Duncan, Davies, Jennifer, Newsom-Davis, Tom, Sharkey, Rachel, Lee, Rebecca, Tivey, Ann, Shotton, Rohan, Griffin, Clare, Horsley, Laura, Shamas, Simon, Sacco, Joseph J, Choudhury, Madbuba, Noble, Jillian, Shaw, Heather, Bolton, Rachel, Ferreira, Ana, Hall, Peter, Ramage, Paul, Bhosle, Jaishree, Massey, Alison, Hill, Michaela, Mukherjee, Leena, Ghaus, Aisha, Derby, Sarah, Brown, Sean, Lowndes, Sarah, Dolly, Saorise, Russell, Beth, Moss, Charlotte, Muller, Daniel, Pillai, Annet, Lowe, Shakeel, Cook, Lucy, Scrase, Christopher, Jyothirmayi, Rema, Board, Ruth, Cornthwaite, Stephanie, Parikh, Shefail, Cattell, Emma, Cox, Nicola, Gault, Abigail, Moody, Sam, Dobeson, Caroline, Baxter, Mark, Roques, Tom, Pawsey, Alexander, Oakes, Roderick, Melcher, Lucinda, Chan, Olivia, Ayers, Sarah, Bowyer, Helen, Althohami, Mohammed, Mittal, Sajjan, Feeney, Laura, Aujayeb, Avinash, Sheikh, Omar, Kathirgamakarthigeyan, Sangary, Woodcock, Victoria, Holt, Francesca, Wyatt, Simon, Topping, Oliver, Tilby, Michael, Bhattacharyya, Madhumita, Burke, Emma, Ellis, Shawn, Chacko, Joseph, Rabbi, Taslima, Rowe, Michael, Sargent, Rebecca, Thirlwell, Christina, Gibson, Jack, Goldstein, Robert, Fittall, Mathew, Gennatas, Spyridon, Okines, Alicia, Best, James, Tillett, Tania, Renninson, Emily, Grumett, Simon, Barrington, Craig, Pettengell, Ruth, Peng, YingyYing, Chackathayil, Julia, Akingboye, Akinfemi, Hollis, Helen, Shin Chin, Ik, Bisht, Vartika, Hartley, Simon, Middleton, Christopher P, Goel, Anshita, Protheroe, Emily, Naksukpaiboon, Paingfan, Anil, Iris, Michell, Joel, D'Costa, Jamie, Wu, Anjui, Ottaviani, Diego, Soosaipillai, Gehan, Galazi, Myria, Chopra, Neha, Benafif, Sarah, Sng, Christopher CT, Wong, Sophia YN, Scott-Brown, Martin, Copson, Ellen, Robinson, Timothy, Hudson, Zoe, Smith, Fiona, Abdulnabi Mohamed, Ali-Abdulnabi, Angelakas, Angelos, Eastlake, Leoni, Poon-King, Ashley, Brunner, Clair, Kwan, Amy, Maynard, Alec, Boyce, Hayley, Spurrell, Emma, Peck, Rahul, Kurec, Bartlomiej

المصدر: JAMA Network Open , 5 (2) , Article e220130. (2022)

وصف الملف: text

Relation: https://discovery.ucl.ac.uk/id/eprint/10144336/1/vrnai_2022_oi_220011_1644548912.0317.pdf; https://discovery.ucl.ac.uk/id/eprint/10144336/

الاتاحة: https://discovery.ucl.ac.uk/id/eprint/10144336/1/vrnai_2022_oi_220011_1644548912.0317.pdf
https://discovery.ucl.ac.uk/id/eprint/10144336/

المؤلفون: Yang, Peiqing, He, Yijing, Qing, Pingying, Xu, Wangdong, Xie, Dan, Cazier, Jean‐Baptiste, Liu, Xiao, Varnai, Csilla, Zhou, Yi, Zhao, Yi, Tang, Huairong, Yin, Xiaoming, Liu, Yi

المساهمون: National Key Research and Development Program of China

المصدر: Journal of Cellular and Molecular Medicine ; volume 26, issue 24, page 6042-6055 ; ISSN 1582-1838 1582-4934

الاتاحة: http://dx.doi.org/10.1111/jcmm.17623
https://onlinelibrary.wiley.com/doi/pdf/10.1111/jcmm.17623
https://onlinelibrary.wiley.com/doi/full-xml/10.1111/jcmm.17623

المؤلفون: Burkoff, Nikolas S., Varnai, Csilla, Wells, Stephen A., Wild, David L.

مصطلحات موضوعية: Quantitative Biology - Biomolecules

URL الوصول: http://arxiv.org/abs/1010.4735

المؤلفون: Wutz, Gordana, Várnai, Csilla, Nagasaka, Kota, Cisneros, David A., Stocsits, Roman R, Tang, Wen, Schoenfelder, Stefan, Jessberger, Gregor, Muhar, Matthias, Hossain, M Julius, Walther, Nike, Koch, Birgit, Kueblbeck, Moritz, Ellenberg, Jan, Zuber, Johannes, Fraser, Peter, Peters, Jan-Michael

المصدر: EMBO Journal. 36(24):3573-3599

مصطلحات موضوعية: chromatin condensation, chromatin structure, genome organization, loop extrusion, vermicelli

وصف الملف: print

URL الوصول: https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-156764
https://doi.org/10.15252/embj.201798004

المؤلفون: Furlan-Magaril, Mayra, Ando-Kuri, Masami, Arzate-Mejía, Rodrigo G., Morf, Jörg, Cairns, Jonathan, Román-Figueroa, Abraham, Tenorio-Hernández, Luis, Poot-Hernández, A. César, Andrews, Simon, Várnai, Csilla, Virk, Boo, Wingett, Steven W., Fraser, Peter

المصدر: Genome Biology, 22(1), 162, (2021-06-08)

مصطلحات موضوعية: Genome 3D organization, Promoter interactions, Circadian gene expression, Transcription regulation, TADs, Chromatin compartments, Enhancers, Circadian rhythms

Relation: https://zenodo.org/communities/eu; oai:zenodo.org:4941065

الاتاحة: https://doi.org/10.1186/s13059-021-02374-3

المؤلفون: Groves, Ian J, Drane, Emma LA, Michalski, Marco, Monahan, Jack M, Scarpini, Cinzia G, Smith, Stephen P, Bussotti, Giovanni, Várnai, Csilla, Schoenfelder, Stefan, Fraser, Peter, Enright, Anton J, Coleman, Nicholas

مصطلحات موضوعية: Carcinogenesis, Chromatin, Epigenesis, Genetic, Female, Genome, Viral, Human papillomavirus 16, Humans, Papillomavirus Infections, Tumor Cells, Cultured, Uterine Cervical Neoplasms, Virus Integration

وصف الملف: Electronic-eCollection; application/pdf

Relation: https://www.repository.cam.ac.uk/handle/1810/329938

الاتاحة: https://www.repository.cam.ac.uk/handle/1810/329938
https://doi.org/10.17863/CAM.77381

المؤلفون: Chovanec, Peter, Collier, Amanda J, Krueger, Christel, Várnai, Csilla, Semprich, Claudia I, Schoenfelder, Stefan, Corcoran, Anne E, Rugg-Gunn, Peter J

مصطلحات موضوعية: Chromatin, DNA Methylation, Enhancer Elements, Genetic, Gene Expression Regulation, Humans, Nanog Homeobox Protein, Octamer Transcription Factor-3, Pluripotent Stem Cells, Promoter Regions, SOXB1 Transcription Factors, Transcription Factors

وصف الملف: Electronic; application/pdf

Relation: https://www.repository.cam.ac.uk/handle/1810/323155

الاتاحة: https://www.repository.cam.ac.uk/handle/1810/323155
https://doi.org/10.17863/CAM.70609

المؤلفون: Booth, Stephen, Curley, Helen, Varnai, Csilla, UKCCMP team, Hughes, Daniel

المصدر: Booth , S , Curley , H , Varnai , C , UKCCMP team , & Hughes , D 2021 , ' Key findings from the UKCCMP cohort of 877 patients with haematological malignancy and COVID-19: disease control as an important factor relative to recent chemotherapy or anti-CD20 therapy ' , British Journal of Haematology . https://doi.org/10.1111/bjh.17937

الاتاحة: https://kclpure.kcl.ac.uk/portal/en/publications/5fd47996-8c5e-4893-8971-1b596a8623a2
https://doi.org/10.1111/bjh.17937
http://www.scopus.com/inward/record.url?scp=85118921775&partnerID=8YFLogxK

المؤلفون: Groves, Ian J., Drane, Emma L. A., Michalski, Marco, Monahan, Jack M., Scarpini, Cinzia G., Smith, Stephen P., Bussotti, Giovanni, Várnai, Csilla, Schoenfelder, Stefan, Fraser, Peter, Enright, Anton J., Coleman, Nicholas

المساهمون: Gewurz, Benjamin E., Cancer Research UK, Pathological Society of Great Britain and Ireland

المصدر: PLOS Pathogens ; volume 17, issue 8, page e1009875 ; ISSN 1553-7374

الاتاحة: http://dx.doi.org/10.1371/journal.ppat.1009875
https://dx.plos.org/10.1371/journal.ppat.1009875

المؤلفون: Várnai, Csilla, Irwin, B., W. J., Payne, M., C., Csányi, Gábor, Chau, P.-L.

المساهمون: University of Birmingham Birmingham, University of Cambridge UK (CAM), Bioinformatique structurale - Structural Bioinformatics, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Microbiologie structurale - Structural Microbiology (Microb. Struc. (UMR_3528 / U-Pasteur_5)), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Some of the simulations in this work were carried out on the Darwin Supercomputer of the University of Cambridge High Performance Computing Service using Strategic Research Infrastructure Funding from the Higher Education Funding Council for England, and other simulations were performed using resources provided by the Cambridge Service for Data Driven Discovery (CSD3) operated by the University of Cambridge Research Computing Service, provided by Dell EMC and Intel using Tier-2 funding from the Engineering and Physical Sciences Research Council (capital grant EP/P020259/1), and DiRAC funding from the Science and Technology Facilities Council. BWJI acknowledges financial support from the UK Engineering and Physical Sciences Research Council Centre for Doctoral Training in Computational Methods for Materials Science under Grant No. EP/L015552/1. PC was partly supported by the INCEPTION project ANR-16-CONV-0005., ANR-16-CONV-0005,INCEPTION,Institut Convergences pour l'étude de l'Emergence des Pathologies au Travers des Individus et des populatiONs(2016)

المصدر: ISSN: 1463-9076.

مصطلحات موضوعية: MESH: Binding Sites, MESH: Humans, MESH: Molecular Dynamics Simulation, MESH: Monte Carlo Method, MESH: Protein Conformation, MESH: Receptors, GABA-A, [PHYS]Physics [physics]

Relation: info:eu-repo/semantics/altIdentifier/pmid/32633279; pasteur-03341745; https://pasteur.hal.science/pasteur-03341745; https://pasteur.hal.science/pasteur-03341745/document; https://pasteur.hal.science/pasteur-03341745/file/pccp2216023.pdf; PUBMED: 32633279

الاتاحة: https://pasteur.hal.science/pasteur-03341745
https://pasteur.hal.science/pasteur-03341745/document
https://pasteur.hal.science/pasteur-03341745/file/pccp2216023.pdf
https://doi.org/10.1039/d0cp01128b

المؤلفون: Wutz, Gordana, Ladurner, Rene, St Hilaire, Brian Glenn, Stocsits, Roman R, Nagasaka, Kota, Pignard, Benoit, Sanborn, Adrian, Tang, Wen, Várnai, Csilla, Ivanov, Miroslav P, Schoenfelder, Stefan, van der Lelij, Petra, Huang, Xingfan, Dürnberger, Gerhard, Roitinger, Elisabeth, Mechtler, Karl, Davidson, Iain Finley, Fraser, Peter, Lieberman-Aiden, Erez, Peters, Jan-Michael

مصطلحات موضوعية: CTCF, TADs, cell biology, chromatin structure, chromosomes, cohesin, gene expression, genome organization, human, loops, Acetylation, Acetyltransferases, CCCTC-Binding Factor, Carrier Proteins, Cell Cycle Proteins, Chromatin, Chromosomal Proteins, Non-Histone, Computer Simulation, G1 Phase, Genome, Humans, Nuclear Proteins, Protein Binding, Proto-Oncogene Proteins, Cohesins

وصف الملف: Electronic; application/pdf

Relation: https://www.repository.cam.ac.uk/handle/1810/304968

الاتاحة: https://www.repository.cam.ac.uk/handle/1810/304968
https://doi.org/10.17863/CAM.52049

المؤلفون: Collombet, Samuel, Ranisavljevic, Noemie, Nagano, Takashi, Varnai, Csilla, Shisode, Tarak, Leung, Wing, Piolot, Tristan, Galupa, Rafael, Borensztein, Maud, Servant, Nicolas, Fraser, Peter, Ancelin, Katia, Heard, Edith

المساهمون: European Molecular Biology Laboratory Heidelberg (EMBL), Génétique et Biologie du Développement, Institut Curie Paris -Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Université Paris Sciences et Lettres (PSL), Centre Hospitalier Régional Universitaire Montpellier (CHRU Montpellier), Cancer et génome: Bioinformatique, biostatistiques et épidémiologie d'un système complexe, Mines Paris - PSL (École nationale supérieure des mines de Paris), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Institut Curie Paris -Institut National de la Santé et de la Recherche Médicale (INSERM), ANR-10-IDEX-0001,PSL,Paris Sciences et Lettres(2010)

المصدر: ISSN: 0028-0836.

مصطلحات موضوعية: [SDV.BDD.EO]Life Sciences [q-bio]/Development Biology/Embryology and Organogenesis, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

Relation: hal-03027197; https://hal.science/hal-03027197; https://hal.science/hal-03027197/document; https://hal.science/hal-03027197/file/Collombet-Ranisavljevic_Nature20.pdf

الاتاحة: https://hal.science/hal-03027197
https://hal.science/hal-03027197/document
https://hal.science/hal-03027197/file/Collombet-Ranisavljevic_Nature20.pdf
https://doi.org/10.1038/s41586-020-2125-z