المؤلفون: María H. Guzmán-López, Miriam Marín-Sanz, Susana Sánchez-León, Francisco Barro

المصدر: International Journal of Molecular Sciences; Volume 22; Issue 23; Pages: 13076

مصطلحات موضوعية: Usearch, multi-copy, multi-target, multi-gene, InDels, CRISPR/Cas, gluten, wheat, celiac disease, gliadins

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Molecular Plant Sciences; https://dx.doi.org/10.3390/ijms222313076

الاتاحة: https://doi.org/10.3390/ijms222313076

المؤلفون: Gian Maria Niccolò Benucci, Reid Longley, Peng Zhang, Qi Zhao, Gregory Bonito, Fuqiang Yu

المصدر: PeerJ, Vol 7, p e7744 (2019)

مصطلحات موضوعية: Microbiome, Microbial ecology, Morchella, USEARCH, Mushroom cultivation, CONSTAX, Medicine, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://peerj.com/articles/7744.pdf; https://peerj.com/articles/7744/; https://doaj.org/toc/2167-8359

URL الوصول: https://doaj.org/article/74dad3e07ccd4c2a98356619bac40288

المؤلفون: Pauvert, Charlie, Buée, Marc, Laval, Valerie, Edel-Hermann, Véronique, Fauchery, Laure, Gautier, Angelique, Lesur, Isabelle, Vallance, Jessica, Vacher, Corinne

المساهمون: Biodiversité, Gènes & Communautés (BioGeCo), Institut National de la Recherche Agronomique (INRA)-Université de Bordeaux (UB), Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), BIOlogie et GEstion des Risques en agriculture (BIOGER), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Agroécologie Dijon, Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Université Bourgogne Franche-Comté COMUE (UBFC), Unité Mixte de Recherche en Santé Végétale (INRA/ENITA) (UMRSV), Institut National de la Recherche Agronomique (INRA)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut des Sciences de la Vigne et du Vin (ISVV)

المصدر: International Phytobiomes Conference 2018 ; https://hal.science/hal-01938707 ; International Phytobiomes Conference 2018, Dec 2018, Montpellier, France. 2018

مصطلحات موضوعية: Bioinformatics, Environmental DNA, Fungi, Illumina MiSeq, Internal transcribed spacer (ITS), Metabarcoding, Mock community, DADA2, USEARCH, VSEARCH, [SDE.BE]Environmental Sciences/Biodiversity and Ecology, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

جغرافية الموضوع: Montpellier, France

Relation: PRODINRA: 453170

الاتاحة: https://hal.science/hal-01938707
https://hal.science/hal-01938707v1/document
https://hal.science/hal-01938707v1/file/Pauvert_Phytobiomes18_Poster_1.pdf

المؤلفون: Rodney T. Richardson, Johan Bengtsson-Palme, Mary M. Gardiner, Reed M. Johnson

المصدر: PeerJ, Vol 6, p e5126 (2018)

مصطلحات موضوعية: SINTAX, USEARCH, Metaxa2, Overclassification, Taxonomic annotation, Classification confidence, Medicine, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://peerj.com/articles/5126.pdf; https://peerj.com/articles/5126/; https://doaj.org/toc/2167-8359

URL الوصول: https://doaj.org/article/741ab40d00a34ff1ae54be1bb7e4b68c

المؤلفون: Yoon, Seok-Hwan, Ha, Sung-min, Lim, Jeongmin, Kwon, Soonjae, Chun, Jongsik

المساهمون: 천종식, Chun, Jongsik

مصطلحات موضوعية: Average nucleotide identity, Genome, Taxonomy, Usearch

Relation: Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, Vol.110 No.10, pp.1281-1286; 55483; http://hdl.handle.net/10371/165733; 2-s2.0-85012917775; https://link.springer.com/article/10.1007%2Fs10482-017-0844-4; 000410906900005

الاتاحة: http://hdl.handle.net/10371/165733
https://doi.org/10.1007/s10482-017-0844-4
https://link.springer.com/article/10.1007%2Fs10482-017-0844-4

المؤلفون: Manduparambil Subramanian Nimmy, Vinod Kumar, Backiyarani Suthanthiram, Uma Subbaraya, Ramawatar Nagar, Chellapilla Bharadwaj, Pradeep Kumar Jain, Panneerselvam Krishnamurthy

مصطلحات موضوعية: Botany, Plant Biology, Plant Systematics and Taxonomy, Plant Cell and Molecular Biology, Plant Developmental and Reproductive Biology, Plant Pathology, Plant Physiology, Plant Biology not elsewhere classified, gene family classification, gene family evolution, MATEs, phylogenomics, synteny network, kingdom wide, USEARCH

Relation: https://figshare.com/articles/dataset/Data_Sheet_2_A_Systematic_Phylogenomic_Classification_of_the_Multidrug_and_Toxic_Compound_Extrusion_Transporter_Gene_Family_in_Plants_pdf/19360346

الاتاحة: https://doi.org/10.3389/fpls.2022.774885.s002
https://figshare.com/articles/dataset/Data_Sheet_2_A_Systematic_Phylogenomic_Classification_of_the_Multidrug_and_Toxic_Compound_Extrusion_Transporter_Gene_Family_in_Plants_pdf/19360346

المؤلفون: Dahan, Dylan A

المصدر: Senior Projects Spring 2015

مصطلحات موضوعية: Microbiome, Zebrafish, Arsenic, metagenomics, 16s rrna, microbiology, host symbiont, microbial, environmental toxins, Bangladesh, west bengal, india, larval zebrafish, qiime, bioinformatics, usearch, dna, pcr, amplification, Environmental Microbiology and Microbial Ecology

وصف الملف: application/pdf

Relation: https://digitalcommons.bard.edu/senproj_s2015/220; https://digitalcommons.bard.edu/cgi/viewcontent.cgi?article=1303&context=senproj_s2015

الاتاحة: https://digitalcommons.bard.edu/senproj_s2015/220
https://digitalcommons.bard.edu/cgi/viewcontent.cgi?article=1303&context=senproj_s2015

المؤلفون: Katie Miaow, Hannah L. Buckley, Donnabella C. Lacap-Bugler

المصدر: PeerJ
PeerJ, Vol 9, p e12065 (2021)

مصطلحات موضوعية: Computer science, Bioinformatics, USEARCH, Indoor bioaerosol, Beta diversity, Mycology, Microbiology, General Biochemistry, Genetics and Molecular Biology, Microbial ecology, Consistency (database systems), Abundance (ecology), Microbial aerosol, Molecular Biology, Decontamination, Bioaerosol, Ecology, Bacteria, General Neuroscience, Fungi, General Medicine, Taxonomic database, NGS, Dada2, Medicine, Alpha diversity, General Agricultural and Biological Sciences

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::716b561ebf72ab035394bf742c83fd23
https://pubmed.ncbi.nlm.nih.gov/34703658

المؤلفون: Nadim J. Ajami, Elizabeth R. Hooker, Melanie Abrahamson, Eric S. Orwoll, Joseph F. Petrosino

المصدر: Contemporary Clinical Trials Communications, Vol 7, Iss, Pp 158-162 (2017)
Contemporary Clinical Trials Communications

مصطلحات موضوعية: 0301 basic medicine, Gerontology, Aging, Gastrointestinal, Genotyping, Population, HRpQCT, High Resolution Peripheral Quantitative Computed Tomography, MrOS, Osteoporotic Fractures in Men Study, USEARCH, search and cluster algorithm, NCATS, National Center for Advancing Translational Sciences, Biology, Gut flora, rDNA, Recombinant Deoxyribonucleic Acid, Article, UPARSE, cluster algorithm, NIAMS, National Institute of Arthritis and Musculoskeletal and Skin Diseases, 03 medical and health sciences, 0302 clinical medicine, Environmental health, Microbiome, education, NIA, National Institute on Aging, Feces, Pharmacology, Community based, Sample handling, education.field_of_study, lcsh:R5-920, CMMR, Alkek Center for Metagenomics and Microbiome Research, Gastrointestinal Microbiome, Men, General Medicine, biology.organism_classification, 030104 developmental biology, Stool, FFQ, Food Frequency Questionnaire, SILVA database, a comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data, OTU, Operational Taxonomic Units, lcsh:Medicine (General), DXA, Dual Energy X-ray Absorptiometry, 030217 neurology & neurosurgery, DNA, Deoxyribonucleic Acid

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ee5212bde33c6d25f0b349cad6807f83
http://www.sciencedirect.com/science/article/pii/S2451865417300224

المؤلفون: Reid Longley, Qi Zhao, Peng Zhang, Fuqiang Yu, Gregory Bonito, Gian Maria Niccolò Benucci

المصدر: PeerJ, Vol 7, p e7744 (2019)
PeerJ

مصطلحات موضوعية: 0106 biological sciences, Operational taxonomic unit, Morchella, USEARCH, CONSTAX, lcsh:Medicine, Mycology, 01 natural sciences, Microbiology, General Biochemistry, Genetics and Molecular Biology, Microbial ecology, 03 medical and health sciences, Morchella sextelata, Stipe (botany), Phialophora, Botany, Microbiome, Agricultural Science, 030304 developmental biology, Amplicon sequencing, 2. Zero hunger, 0303 health sciences, biology, Ecology, General Neuroscience, lcsh:R, General Medicine, 15. Life on land, biology.organism_classification, Pileus, Mushroom cultivation, General Agricultural and Biological Sciences, Pedobacter, 010606 plant biology & botany

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c484af5bbc4b5f90d84f5c800a934b9
https://peerj.com/articles/7744/

المؤلفون: Mary M. Gardiner, Reed M. Johnson, Rodney T. Richardson, Johan Bengtsson-Palme

المصدر: PeerJ, Vol 6, p e5126 (2018)
PeerJ

مصطلحات موضوعية: Metaxa2, 0106 biological sciences, 0301 basic medicine, False discovery rate, Entomology, Bioinformatics, USEARCH, Classification confidence, lcsh:Medicine, Locus (genetics), Biology, computer.software_genre, 010603 evolutionary biology, 01 natural sciences, Genome, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, Taxonomic annotation, Non-redundant database, Clade, Ecology, Database, General Neuroscience, UTAX, lcsh:R, Cytochrome c oxidase subunit I, General Medicine, Amplicon, 030104 developmental biology, Overclassification, Metagenomics, General Agricultural and Biological Sciences, computer, SINTAX

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b42a9a20e81a47e2dfaf09cfbf55eec
https://doi.org/10.7287/peerj.preprints.26662v1

المؤلفون: Pfeiffer, Stefan

مصطلحات موضوعية: Illumina MiSeq paired end sequencing, 16S rRNA gene amplicon sequencing and analysis, USEARCH, VSEARCH, microbiome statistics, bacterial community analysis

Relation: https://github.com/StefanPfeiffer80/FASPA.github.io; https://zenodo.org/communities/microbiome; https://doi.org/10.5281/zenodo.1302799; https://doi.org/10.5281/zenodo.1314113; oai:zenodo.org:1314113

الاتاحة: https://doi.org/10.5281/zenodo.1314113

المؤلفون: TERRAT, Sébastien, DEQUIEDT, Samuel, KARIMI, Battle, CHEMIDLIN PREVOST-BOURE, Nicolas, MARON, Pierre-Alain, RANJARD, Lionel

المساهمون: COTTIN, Aurélien

مصطلحات موضوعية: Taxonomy, USEARCH, SILVA, PERL

Relation: https://doi.org/10.5281/zenodo.1064169; https://doi.org/10.5281/zenodo.1064170; oai:zenodo.org:1064170

الاتاحة: https://doi.org/10.5281/zenodo.1064170

المؤلفون: Rutledge, Lorelei Belinda

المساهمون: University Libraries, J. Willard Marriott Library

مصطلحات موضوعية: USearch, tutorial

وصف الملف: video/x-m4v; 17,354,644 bytes

Relation: ir-main,60865; https://collections.lib.utah.edu/ark:/87278/s6m04q7f

الاتاحة: https://collections.lib.utah.edu/ark:/87278/s6m04q7f

المؤلفون: Kim, Eunsoo, Sprung, Ben, Duhamel, Solange, Filardi, Christopher, Shin, Mann Kyoon

مصطلحات موضوعية: Environmental sequencing, usearch, python, paired-end sequencing, 18S, ribosomal RNA

Relation: https://doi.org/; https://doi.org/10.5281/zenodo.56375; oai:zenodo.org:56375

الاتاحة: https://doi.org/10.5281/zenodo.56375