المؤلفون: Steffen Albrecht, Tommaso Andreani, Miguel A Andrade-Navarro, Jean Fred Fontaine

المصدر: PLoS ONE, Vol 17, Iss 7, p e0270043 (2022)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/94a3d8044bb3484eb3618434e23e8f9a

المؤلفون: Maroun Bou Sleiman, Michael Vincent Frochaux, Tommaso Andreani, Dani Osman, Roderic Guigo, Bart Deplancke

المصدر: Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)

مصطلحات موضوعية: Infection, Gut, Splicing, Intron retention, Drosophila melanogaster, DGRP, Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/3d9ca418408842eca65439d8d29521d4

المؤلفون: Michael V. Frochaux, Maroun Bou Sleiman, Vincent Gardeux, Riccardo Dainese, Brian Hollis, Maria Litovchenko, Virginie S. Braman, Tommaso Andreani, Dani Osman, Bart Deplancke

المصدر: Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)

مصطلحات موضوعية: Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/8e53e953bb0541ca9e5d26a86a654e52

المؤلفون: Huidong Chen, Caleb Lareau, Tommaso Andreani, Michael E. Vinyard, Sara P. Garcia, Kendell Clement, Miguel A. Andrade-Navarro, Jason D. Buenrostro, Luca Pinello

المصدر: Genome Biology, Vol 20, Iss 1, Pp 1-25 (2019)

مصطلحات موضوعية: scATAC-seq, Feature matrix, Benchmarking, Regulatory genomics, Clustering, Visualization, Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: http://link.springer.com/article/10.1186/s13059-019-1854-5; https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/1ae37a2a47f74b2fb58bd9ef5d673685

المؤلفون: Miguel A. Andrade-Navarro, Katja Mühlenberg, Eike J. Spruth, Nancy Mah, Adrián González-López, Tommaso Andreani, Jenny Russ, Matthew R. Huska, Enrique M. Muro, Jean-Fred Fontaine, Vyacheslav Amstislavskiy, Alexei Soldatov, Wilfried Nietfeld, Erich E. Wanker, Josef Priller

المصدر: Frontiers in Neurology, Vol 11 (2020)

مصطلحات موضوعية: RNA-Seq, differential gene expression, Huntington's disease, disease markers, inflammation, Neurology. Diseases of the nervous system, RC346-429

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fneur.2020.573560/full; https://doaj.org/toc/1664-2295

URL الوصول: https://doaj.org/article/925b06c38d3f4fc9b92bb87159e9a54c

المؤلفون: Milad R Vahid, Andre H Kurlovs, Tommaso Andreani, Franck Augé, Reza Olfati-Saber, Emanuele de Rinaldis, Franck Rapaport, Virginia Savova

المصدر: NAR Genomics and Bioinformatics. 5

مصطلحات موضوعية: Structural Biology, Applied Mathematics, Genetics, Molecular Biology, Computer Science Applications

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::dd57b9dd631ef446168ddbdeecf2f18d
https://doi.org/10.1093/nargab/lqad030

المؤلفون: Kerstin Nagel-Wolfrum, Benjamin R Fadl, Mirjana M Becker, Kirsten A Wunderlich, Jessica Schäfer, Daniel Sturm, Jacques Fritze, Burcu Gür, Lew Kaplan, Tommaso Andreani, Tobias Goldmann, Matthew Brooks, Margaret R Starostik, Anagha Lokhande, Melissa Apel, Karl R Fath, Katarina Stingl, Susanne Kohl, Margaret M DeAngelis, Ursula Schlötzer-Schrehardt, Ivana K Kim, Leah A Owen, Jan M Vetter, Norbert Pfeiffer, Miguel A Andrade-Navarro, Antje Grosche, Anand Swaroop, Uwe Wolfrum

مصطلحات موضوعية: Genetics, General Medicine, Molecular Biology, Genetics (clinical), 570 Biowissenschaften, 570 Life sciences

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f54ab98f223800a320d8b2134cdb99c7

المؤلفون: Tommaso Andreani, Linda M Slot, Samuel Gabillard, Carsten Strübing, Claus Reimertz, Veeranagouda Yaligara, Aleida M Bakker, Reza Olfati-Saber, René E M Toes, Hans U Scherer, Franck Augé, Deimantė Šimaitė

المصدر: NAR Genomics and Bioinformatics, 4(3). OXFORD UNIV PRESS

مصطلحات موضوعية: Structural Biology, Applied Mathematics, Genetics, Molecular Biology, Computer Science Applications

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::25ca47733ed09f7589183d35ac2a950c
https://hdl.handle.net/1887/3562178

المؤلفون: Christof Niehrs, Tommaso Andreani, Manuel Leichsenring, Michael U. Musheev, Medhavi Mallick, Emil Karaulanov, Katrin M. Schüle, Viviana Vastolo

المصدر: Genes & Development. 33:782-798

مصطلحات موضوعية: DNA damage, Cell Cycle Proteins, Biology, DNA methyltransferase, Gene Knockout Techniques, Mice, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Genetics, Animals, Gene, Cells, Cultured, Embryonic Stem Cells, 030304 developmental biology, 5-Hydroxymethylcytosine, 0303 health sciences, Gene Expression Regulation, Developmental, Nuclear Proteins, Antigens, Differentiation, Cell biology, DNA Demethylation, DNA demethylation, chemistry, 030220 oncology & carcinogenesis, DNA methylation, Maternal to zygotic transition, Thymine-DNA glycosylase, Research Paper, Developmental Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2975130be7330701035d7b1b7b884968
https://doi.org/10.1101/gad.325696.119

المؤلفون: Kerstin Nagel-Wolfrum, Benjamin R. Fadl, Mirjana M. Becker, Kirsten A. Wunderlich, Jessica Schäfer, Daniel Sturm, Jacques Fritze, Burcu Gür, Lew Kaplan, Tommaso Andreani, Tobias Goldmann, Matthew Brooks, Margaret R. Starostik, Anagha Lokhande, Melissa Apel, Karl R. Fath, Katarina Stingl, Susanne Kohl, Margaret M. DeAngelis, Ursula Schlötzer-Schrehardt, Ivana K. Kim, Leah A. Owen, Jan M. Vetter, Norbert Pfeiffer, Miguel A. Andrade-Navarro, Antje Grosche, Anand Swaroop, Uwe Wolfrum

مصطلحات موضوعية: Scaffold protein, Gene isoform, Retina, biology, Usher syndrome, Cilium, medicine.disease, Phenotype, Cell biology, medicine.anatomical_structure, Rhodopsin, otorhinolaryngologic diseases, medicine, biology.protein, Muller glia

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::329b57163bb4db6b733089a71fdee651
https://doi.org/10.1101/2021.08.27.457962

المؤلفون: Steffen Albrecht, Tommaso Andreani, Miguel A. Andrade-Navarro, Jean-Fred Fontaine

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Cell type, AcademicSubjects/SCI00010, Computational biology, Plasma protein binding, Biology, Genome, Cell Line, Evolution, Molecular, 03 medical and health sciences, chemistry.chemical_compound, Mice, 0302 clinical medicine, Narese/3, Cell Line, Tumor, Genetics, Animals, Humans, Epigenetics, Binding site, Promoter Regions, Genetic, Transcription factor, Embryonic Stem Cells, 030304 developmental biology, 0303 health sciences, Principal Component Analysis, Binding Sites, Nucleotides, Genetic Variation, Promoter, Genomics, Chromatin, chemistry, CpG site, MCF-7 Cells, Chromatin Immunoprecipitation Sequencing, Methods Online, R-Loop Structures, K562 Cells, Chromatin immunoprecipitation, 030217 neurology & neurosurgery, Function (biology), DNA, Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a558cc2ec63e4ab3af9661e9b4d456d
https://pubmed.ncbi.nlm.nih.gov/32187374

المؤلفون: Steffen Albrecht, Tommaso Andreani

Relation: https://github.com/salbrec/SIMPA/tree/v2.0; https://doi.org/10.5281/zenodo.5105187; https://doi.org/10.5281/zenodo.5105188; oai:zenodo.org:5105188

الاتاحة: https://doi.org/10.5281/zenodo.5105188

المؤلفون: Tommaso Andreani, Miguel A. Andrade-Navarro, Steffen Albrecht, Jean-Fred Fontaine

مصطلحات موضوعية: Computer science, business.industry, Cell chip, Python (programming language), Machine learning, computer.software_genre, ENCODE, Identification (information), Simulated data, Feature (machine learning), Imputation (statistics), Artificial intelligence, Cluster analysis, business, computer, computer.programming_language

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::b97156fb33b61ec525eb625291bfe88f
https://doi.org/10.1101/2019.12.20.883983

المؤلفون: Caleb A. Lareau, Miguel A. Andrade-Navarro, Luca Pinello, Jason D. Buenrostro, Sara P. Garcia, Kendell Clement, Michael E. Vinyard, Tommaso Andreani, Huidong Chen

المصدر: Genome Biology, Vol 20, Iss 1, Pp 1-25 (2019)
Genome Biology

مصطلحات موضوعية: Epigenomics, lcsh:QH426-470, Test data generation, Computer science, Cell, ATAC-seq, Computational biology, Biology, Clustering, Transcriptome, Mice, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, medicine, Animals, Humans, Profiling (information science), scATAC-seq, natural sciences, Epigenetics, Feature matrix, Cluster analysis, lcsh:QH301-705.5, Gene, Transposase, Visualization, 030304 developmental biology, Sparse matrix, 0303 health sciences, Featurization, Dimensionality reduction, Research, Computational Biology, Sequence Analysis, DNA, Chromatin, Benchmarking, lcsh:Genetics, medicine.anatomical_structure, lcsh:Biology (General), chemistry, Regulatory genomics, Single-Cell Analysis, Peak calling, 030217 neurology & neurosurgery, DNA

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8e8362192d0fb374c4b840503a115357

المؤلفون: Miguel A. Andrade-Navarro, Katja Mühlenberg, Eike J. Spruth, Nancy Mah, Adrián González-López, Tommaso Andreani, Jenny Russ, Matthew R. Huska, Enrique M. Muro, Jean-Fred Fontaine, Vyacheslav Amstislavskiy, Alexei Soldatov, Wilfried Nietfeld, Erich E. Wanker, Josef Priller

مصطلحات موضوعية: Neurology and Neuromuscular Diseases, Neurogenetics, RNA-Seq, differential gene expression, Huntington's disease, disease markers, inflammation

Relation: https://figshare.com/articles/dataset/Table_1_RNA_Sequencing_of_Human_Peripheral_Blood_Cells_Indicates_Upregulation_of_Immune-Related_Genes_in_Huntington_s_Disease_XLS/13296338

الاتاحة: https://doi.org/10.3389/fneur.2020.573560.s001
https://figshare.com/articles/dataset/Table_1_RNA_Sequencing_of_Human_Peripheral_Blood_Cells_Indicates_Upregulation_of_Immune-Related_Genes_in_Huntington_s_Disease_XLS/13296338