المؤلفون: Toby Mathieson, Holger Franken, Jan Kosinski, Nils Kurzawa, Nico Zinn, Gavain Sweetman, Daniel Poeckel, Vikram S. Ratnu, Maike Schramm, Isabelle Becher, Michael Steidel, Kyung-Min Noh, Giovanna Bergamini, Martin Beck, Marcus Bantscheff, Mikhail M. Savitski

المصدر: Nature Communications, Vol 9, Iss 1, Pp 1-10 (2018)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/da0726d0c6b44f4fa437f686bacfcd20

المؤلفون: Nico Zinn (1930654), Thilo Werner (1355949), Carola Doce (1930651), Toby Mathieson (1290375), Christine Boecker (10184592), Gavain Sweetman (1827373), Christian Fufezan (168512), Marcus Bantscheff (1290387)

مصطلحات موضوعية: Biophysics, Biochemistry, Genetics, Molecular Biology, Physiology, Pharmacology, Infectious Diseases, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Staurosporine targets, condition-based multiplexing, degradation events, isobaric mass tags, SILAC, 16- Plex Isobaric Mass Tags Multiplexed, mass spectrometry experiment, EC 50 values, HepG 2 cell extracts, multiplexed proteomics, proteome-wide effects, degradation rates, mPDP approach, regulation events, TPP measures changes, 16- plex isobaric mass tags, multiplexed proteome dynamics, kinobeads gold, Proteomics-Based Drug Mechanism-of-., protein synthesis

Relation: https://figshare.com/articles/journal_contribution/Improved_Proteomics-Based_Drug_Mechanism-of-Action_Studies_Using_16-Plex_Isobaric_Mass_Tags/14099106

الاتاحة: https://doi.org/10.1021/acs.jproteome.0c00900.s001

المؤلفون: Carola Doce, Christian Fufezan, Marcus Bantscheff, Nico Zinn, Christine Boecker, Toby Mathieson, Thilo Werner, Gavain Sweetman

المصدر: Journal of proteome research. 20(3)

مصطلحات موضوعية: 0301 basic medicine, Proteomics, 030102 biochemistry & molecular biology, Proteome, Chemistry, Protein Stability, Quantitative proteomics, General Chemistry, Computational biology, Mass spectrometry, Biochemistry, Small molecule, Mass Spectrometry, 03 medical and health sciences, 030104 developmental biology, Pharmaceutical Preparations, Stable isotope labeling by amino acids in cell culture, medicine, Isobaric process, Staurosporine, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d356ea7731030a4d4bad0a79b52cf30c
https://pubmed.ncbi.nlm.nih.gov/33621079

المؤلفون: Julia Mergner, Martin Frejno, Markus List, Michael Papacek, Xia Chen, Ajeet Chaudhary, Patroklos Samaras, Sandra Richter, Hiromasa Shikata, Maxim Messerer, Daniel Lang, Stefan Altmann, Philipp Cyprys, Daniel P. Zolg, Toby Mathieson, Marcus Bantscheff, Rashmi R. Hazarika, Tobias Schmidt, Corinna Dawid, Andreas Dunkel, Thomas Hofmann, Stefanie Sprunck, Pascal Falter-Braun, Frank Johannes, Klaus F. X. Mayer, Gerd Jürgens, Mathias Wilhelm, Jan Baumbach, Erwin Grill, Kay Schneitz, Claus Schwechheimer, and Bernhard Kuster.

مصطلحات موضوعية: info:eu-repo/classification/ddc/570, Biowissenschaften, Biologie, BayBioMS, Plant molecular biology, Proteomic analysis

Relation: https://mediatum.ub.tum.de/1574650

الاتاحة: https://mediatum.ub.tum.de/1574650
https://doi.org/10.1038/s41586-020-2094-2

المؤلفون: Martin Frejno, Tobias Schmidt, Xia Chen, Rashmi R. Hazarika, Sandra Richter, Daniel Lang, Philipp Cyprys, Stefanie Sprunck, Thomas Hofmann, Markus List, Marcus Bantscheff, Bernhard Kuster, Ajeet Chaudhary, Kay Schneitz, Patroklos Samaras, Gerd Jürgens, Daniel P Zolg, Stefan Altmann, Mathias Wilhelm, Corinna Dawid, Pascal Falter-Braun, Jan Baumbach, Maxim Messerer, Andreas Dunkel, Hiromasa Shikata, Michael Papacek, Claus Schwechheimer, Toby Mathieson, Erwin Grill, Frank Johannes, Julia Mergner, Klaus F. X. Mayer

المصدر: Nature 579, 409-414 (2020)

مصطلحات موضوعية: 0106 biological sciences, 0303 health sciences, Multidisciplinary, food and beverages, Computational biology, Biology, biology.organism_classification, Proteomics, 01 natural sciences, Transcriptome, 03 medical and health sciences, Open reading frame, Molecular Sequence Annotation, Arabidopsis, Proteome, Sequence motif, Gene, 030304 developmental biology, 010606 plant biology & botany

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2848591b4792f8806eb3767d4e3420fc
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=58639

المؤلفون: Julia, Mergner, Martin, Frejno, Markus, List, Michael, Papacek, Xia, Chen, Ajeet, Chaudhary, Patroklos, Samaras, Sandra, Richter, Hiromasa, Shikata, Maxim, Messerer, Daniel, Lang, Stefan, Altmann, Philipp, Cyprys, Daniel P, Zolg, Toby, Mathieson, Marcus, Bantscheff, Rashmi R, Hazarika, Tobias, Schmidt, Corinna, Dawid, Andreas, Dunkel, Thomas, Hofmann, Stefanie, Sprunck, Pascal, Falter-Braun, Frank, Johannes, Klaus F X, Mayer, Gerd, Jürgens, Mathias, Wilhelm, Jan, Baumbach, Erwin, Grill, Kay, Schneitz, Claus, Schwechheimer, Bernhard, Kuster

المصدر: Scientific Data

مصطلحات موضوعية: Proteomics, Data Descriptor, Proteome, Arabidopsis thaliana, Arabidopsis Proteins, fungi, Amino Acid Motifs, Arabidopsis, food and beverages, Datasets as Topic, Plant morphogenesis, Proteomic analysis, Molecular Sequence Annotation, Phosphoproteins, Mass Spectrometry, Open Reading Frames, Gene Expression Regulation, Plant, Organ Specificity, RNA, Messenger, Phosphorylation, Databases, Protein, Transcriptome

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::667724acd0e6391d6c2d543feef4e4d9
https://pubmed.ncbi.nlm.nih.gov/33037224

المؤلفون: Rab K. Prinjha, Anne Rueger, Neil Stuart Garton, Dirk Eberhard, David Matthew Wilson, Marcus Bantscheff, Robert J. Sheppard, Kevin Lee, Jack A. Brown, Nigel Ramsden, Susan Marie Westaway, Gerard Drewes, Philip G. Humphreys, Toby Mathieson, Gerard Joberty, Marcel Muelbaier, Valerie Reader, Markus Boesche

المصدر: ACS Chemical Biology. 11:2002-2010

مصطلحات موضوعية: Proteomics, 0301 basic medicine, chemistry.chemical_classification, Cofactor binding, biology, Drug discovery, Druggability, Active site, General Medicine, Biochemistry, Small molecule, Dioxygenases, 03 medical and health sciences, 030104 developmental biology, Enzyme, chemistry, Dioxygenase, biology.protein, Ketoglutaric Acids, Molecular Medicine, Chemoproteomics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a1e514fee0ea43db13a3bff9292a026a
https://doi.org/10.1021/acschembio.6b00080

المؤلفون: Emanuel Ziegler, Harald Marx, Mathias Wilhelm, Holger Wenschuh, Marcus Bantscheff, Toby Mathieson, Amin Moghaddas Gholami, Lars Butzmann, Bernhard Kuster, Siegfried Gessulat, Ulf Reimer, Anja Gerstmair, Simone Lemeer, Marcus Lieberenz, Martin Mollenhauer, Joos-Hendrik Boese, Mikhail M. Savitski, Judith Schlegl, Franz Faerber, Karsten Schnatbaum, Julia Slotta-Huspenina, Hannes Hahne

المصدر: Nature. 509:582-587

مصطلحات موضوعية: Transcriptome, Multidisciplinary, NeXtProt, Proteome, Human proteome project, Genomics, Human genome, Computational biology, Biology, Proteogenomics, Bioinformatics, Proteomics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::bdda35306b455781159ed0ec37009fcc
https://doi.org/10.1038/nature13319

المؤلفون: Isabelle Becher, Daniel Poeckel, Maike Schramm, Kyung-Min Noh, Michael Steidel, Mikhail M. Savitski, Vikram S. Ratnu, Gavain Sweetman, Giovanna Bergamini, Holger Franken, Nils Kurzawa, Martin Beck, Marcus Bantscheff, Nico Zinn, Toby Mathieson, Jan Kosinski

المصدر: Nature Communications
Nature Communications, Vol 9, Iss 1, Pp 1-10 (2018)

مصطلحات موضوعية: 0301 basic medicine, Proteomics, Proteasome Endopeptidase Complex, Science, Cells, General Physics and Astronomy, Peptide, Computational biology, General Biochemistry, Genetics and Molecular Biology, Mass Spectrometry, Article, 03 medical and health sciences, Mice, 0302 clinical medicine, Stable isotope labeling by amino acids in cell culture, Animals, Humans, Nuclear pore, lcsh:Science, Cells, Cultured, chemistry.chemical_classification, Multidisciplinary, Chemistry, Protein turnover, Proteins, General Chemistry, 030104 developmental biology, Proteostasis, Proteasome, Turnover, lcsh:Q, Peptides, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::18af357a7c2cb379e8ec8ed90ae99d18
https://pubmed.ncbi.nlm.nih.gov/29449567

المؤلفون: Mikhail M. Savitski, Marcus Bantscheff, Toby Mathieson, Markus Boesche, Bernhard Kuster, Manja Lang, Simone Lemeer

المصدر: Molecular & Cellular Proteomics. 10:S1-S12

مصطلحات موضوعية: Phosphopeptides, Proteomics, Regular Issue, Proteome, Collision-induced dissociation, Computational biology, Mass spectrometry, Orbitrap, Biochemistry, Mass Spectrometry, Analytical Chemistry, law.invention, law, Humans, Phosphorylation, Molecular Biology, Ions, Binding Sites, Chromatography, Chemistry, Phosphopeptide, Computational Biology, Reproducibility of Results, Electron-transfer dissociation, Mass spectrum, Ion trap, Peptides, Protein Processing, Post-Translational, Algorithms, Software, Chromatography, Liquid

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1555b3fbbebeb575bbfaa63a1cb950d
https://doi.org/10.1074/mcp.m110.003830

المؤلفون: Marcus Bantscheff, Mikhail M. Savitski, Gavain Sweetman, Toby Mathieson, Arjen Scholten

المصدر: Analytical Chemistry. 82:9843-9849

مصطلحات موضوعية: Phosphopeptides, Proteomics, False discovery rate, Chromatography, Phosphopeptide, Chemistry, Molecular Sequence Data, Fragmentation (computing), Phosphoproteomics, Replicate, Orbitrap, Mass spectrometry, Mass Spectrometry, Analytical Chemistry, law.invention, law, Cell Line, Tumor, Humans, Amino Acid Sequence, Chromatography, High Pressure Liquid, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c675a7ffd79e130c701d27516453f29b
https://doi.org/10.1021/ac102083q

المؤلفون: Marcus Bantscheff, Isabelle Becher, Mikhail M. Savitski, Toby Mathieson

المصدر: Journal of Proteome Research. 9:5511-5516

مصطلحات موضوعية: Proteomics, chemistry.chemical_classification, Computer science, business.industry, Peptide, General Chemistry, Computational biology, Tandem mass spectrometry, Biochemistry, Combinatorial chemistry, Mass Spectrometry, Peptide Fragments, Identification (information), Search engine, Text mining, chemistry, High mass, Databases, Protein, business, Algorithms

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ca4fa1758712424f10a38ca9c42d4b80
https://doi.org/10.1021/pr1006813

المؤلفون: Gerard Drewes, Andreas Bauer, Toby Mathieson, Bernhard Kuster, Gitte Neubauer, Yann Abraham, Marcus Bantscheff, Carsten Hopf, Manfred Raida, Scott Hobson, Gavain Sweetman, Ulrich Kruse, Jens Rick, Nigel Ramsden, Tewis Bouwmeester, Sonja Bastuck, Valerie Reader, Dirk Eberhard, Jessica Perrin, Markus Boesche, Christina Rau

المصدر: Nature Biotechnology. 25:1035-1044

مصطلحات موضوعية: Cell Extracts, Proteomics, medicine.drug_class, Biomedical Engineering, Bioengineering, Computational biology, Biology, Applied Microbiology and Biotechnology, Chromatography, Affinity, Piperazines, Receptor tyrosine kinase, Tyrosine-kinase inhibitor, Inhibitory Concentration 50, Discoidin Domain Receptor 1, hemic and lymphatic diseases, medicine, Humans, Phosphorylation, Quinone Reductases, Proto-Oncogene Proteins c-abl, Protein Kinase Inhibitors, ABL, Receptor Protein-Tyrosine Kinases, Enzymes, Immobilized, Dasatinib, Pyrimidines, Imatinib mesylate, Pharmaceutical Preparations, Biochemistry, Benzamides, Proteome, Imatinib Mesylate, biology.protein, Molecular Medicine, K562 Cells, Bosutinib, HeLa Cells, Signal Transduction, Biotechnology, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f04550d4646c3a3d6c190b8e33a18b6
https://doi.org/10.1038/nbt1328

المؤلفون: Marcus Bantscheff, Ina Tögel, Holger Franken, Thilo Werner, Wolfgang Huber, Dorothee Childs, Gerard Drewes, Stephan Gade, Toby Mathieson, Carola Doce, Gavain Sweetman, Mikhail M. Savitski, Friedrich B M Reinhard

المصدر: Nature protocols. 10(10)

مصطلحات موضوعية: Proteome, Drug discovery, Protein Stability, Protein Array Analysis, Temperature, Computational biology, Biology, Mass spectrometry, Tandem mass tag, Molecular biology, General Biochemistry, Genetics and Molecular Biology, Melting curve analysis, Mass Spectrometry, Database normalization, chemistry.chemical_compound, Drug Delivery Systems, chemistry, Panobinostat, Humans, K562 Cells

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43b66295e225640bdc595031cda30c77
https://pubmed.ncbi.nlm.nih.gov/26379230

المؤلفون: Gavain Sweetman, Marcus Bantscheff, Toby Mathieson, Thilo Werner, Mikhail M. Savitski, Maria Fälth Savitski

المصدر: Analytical chemistry. 86(7)

مصطلحات موضوعية: Ions, Neutrons, Chromatography, Chemistry, Quantitative proteomics, Analytical chemistry, Proteomics, Mass spectrometry, Orbitrap, Analytical Chemistry, Ion, law.invention, Isobaric labeling, law, Tandem Mass Spectrometry, Isobaric process, Neutron

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4b79ee2037639735a48ec22e72eb5666
https://pubmed.ncbi.nlm.nih.gov/24579773

المؤلفون: Marcus Bantscheff, Fiona Pachl, Isabelle Becher, Toby Mathieson, Nico Zinn, Bernhard Kuster, Mikhail M. Savitski, Carola Doce, Gavain Sweetman

المصدر: Journal of proteome research. 12(8)

مصطلحات موضوعية: Proteomics, Chromatography, Proteomics methods, Staining and Labeling, Chemistry, Escherichia coli Proteins, Quantitative proteomics, General Chemistry, Mass spectrometry, Biochemistry, Peptide Fragments, Molecular Weight, Jurkat Cells, Tandem Mass Spectrometry, Escherichia coli, Humans, K562 Cells, human activities, Algorithms

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::90e2c32804334bd928daf473b9b4db07
https://pubmed.ncbi.nlm.nih.gov/23768245

المؤلفون: Julie A. Frearson, Diego Miranda-Saavedra, Michael A. J. Ferguson, Marcus Bantscheff, Paul W. Wyatt, Raffaella Grimaldi, Gerard Drewes, Toby Mathieson, Dirk Eberhard, Michael D. Urbaniak

المصدر: ACS Chemical Biology

مصطلحات موضوعية: Proteomics, 030231 tropical medicine, Trypanosoma brucei brucei, Protozoan Proteins, Trypanosoma brucei, Biochemistry, 03 medical and health sciences, 0302 clinical medicine, parasitic diseases, Drug Discovery, Parasite hosting, Humans, Chemoproteomics, Kinome, Protein Kinase Inhibitors, 030304 developmental biology, Trypanocidal agent, 0303 health sciences, biology, Kinase, Drug discovery, General Medicine, Articles, biology.organism_classification, Trypanocidal Agents, 3. Good health, Trypanosomiasis, African, Molecular Medicine, Protein Kinases

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::203748c768b734052b1d88ad6e366271
https://doi.org/10.1021/cb300326z

المؤلفون: Katie Ellard, Marcus Bantscheff, Satoko Shimamura, Kathryn Bell, Carsten Hopf, Faiza Rharbaoui, Nigel Ramsden, Mikhail M. Savitski, Gerard Drewes, Gitte Neubauer, Raffaella Mangano, Andrew Cansfield, Toby Mathieson, Ivan Plavec, Christina Rau, Friedrich B M Reinhard, Daniel Leggate, Alison O'Mahony, Thilo Werner, Carola Doce, Jessica Perrin, Katrin Müller, Giovanna Bergamini, Oliver Rausch, Emilio Hirsch

المصدر: Nature chemical biology. 8(6)

مصطلحات موضوعية: Male, Cellular differentiation, Biology, Binding, Competitive, Cell Line, Small Molecule Libraries, Mice, Structure-Activity Relationship, In vivo, Cell Movement, Drug Discovery, medicine, Structure–activity relationship, Animals, Class Ib Phosphatidylinositol 3-Kinase, Humans, Chemoproteomics, Enzyme Inhibitors, Rats, Wistar, Molecular Biology, Phosphoinositide-3 Kinase Inhibitors, Molecular Structure, Drug discovery, Anti-Inflammatory Agents, Non-Steroidal, Interleukin-17, Cell Differentiation, Cell Biology, T helper cell, T-Lymphocytes, Helper-Inducer, Arthritis, Experimental, In vitro, Cell biology, Rats, Mice, Inbred C57BL, medicine.anatomical_structure, Cell culture, Mice, Inbred DBA

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b747e5342fff30edde4865e7369029c5
https://pubmed.ncbi.nlm.nih.gov/22544264

المؤلفون: Isabelle Becher, Valerie Reader, Giovanna Bergamini, Gavain Sweetman, Carola Huthmacher, Nigel Ramsden, Katja Strunk, Dirk Eberhard, Markus Boesche, Antje Dittmann, Marcus Bantscheff, Mikhail M. Savitski, Ulrich Kruse, Daniel Poeckel, Birgit Dümpelfeld, Gitte Neubauer, Judith Schlegl, Anne-Marie Michon, Gerard Drewes, Paola Grandi, Toby Mathieson, Carsten Hopf, Yann Abraham, Manja Delling

المصدر: Nature biotechnology. 29(3)

مصطلحات موضوعية: Proteomics, SIN3 Complex, medicine.drug_class, Chemistry, HDAC10, Histone deacetylase inhibitor, Biomedical Engineering, Bioengineering, HDAC6, Applied Microbiology and Biotechnology, Small molecule, Peptide Mapping, Histone Deacetylases, Mass Spectrometry, Biochemistry, Protein Interaction Mapping, medicine, Molecular Medicine, Chemoproteomics, Histone deacetylase, Mitosis, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::858112a78ab434e3f673b402df393db3
https://pubmed.ncbi.nlm.nih.gov/21390028

المؤلفون: Gavain Sweetman, Manja Lang, Frank Fischer, Toby Mathieson, Marcus Bantscheff, Mikhail M. Savitski

المصدر: Journal of the American Society for Mass Spectrometry. 21(10)

مصطلحات موضوعية: Proteomics, Reproducibility, Chromatography, Chemistry, Phosphotransferases, Reproducibility of Results, Mass spectrometry, Orbitrap, Peptide Mapping, Mass Spectrometry, Peptide Fragments, law.invention, Jurkat Cells, Structural Biology, law, Isotope Labeling, Isobaric process, Humans, Trypsin, Ion trap, Target protein, Spectroscopy, Isobaric tag for relative and absolute quantitation

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3aa6926f0eaa084a6dc88f88f4cc3ec5
https://pubmed.ncbi.nlm.nih.gov/20171116