المؤلفون: Tabea M. Soelter, Timothy C. Howton, Amanda D. Clark, Vishal H. Oza, Brittany N. Lasseigne

المصدر: Cell Communication and Signaling, Vol 22, Iss 1, Pp 1-16 (2024)

مصطلحات موضوعية: Alzheimer’s disease, Neurodegeneration, Cell-cell communication, Signaling, Single-cell, Networks, Medicine, Cytology, QH573-671

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1478-811X

URL الوصول: https://doaj.org/article/8bb2bd0ed74f487fb8fd59b64dc9c11c

المؤلفون: Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, Brittany N. Lasseigne

المصدر: Molecular Brain, Vol 17, Iss 1, Pp 1-16 (2024)

مصطلحات موضوعية: Long-read RNA sequencing, Brain, Sex, Transcript usage, Isoform usage, Neurology. Diseases of the nervous system, RC346-429

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1756-6606

URL الوصول: https://doaj.org/article/886828797be44df2ac40fc1ae2c4e865

المؤلفون: Jennifer L. Fisher, Elizabeth J. Wilk, Vishal H. Oza, Sam E. Gary, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, Anita B. Hjelmeland, Brittany N. Lasseigne

المصدر: FEBS Open Bio, Vol 14, Iss 5, Pp 803-830 (2024)

مصطلحات موضوعية: cancer, drug repurposing, gene signature, glioblastoma, transcriptomic signature, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2211-5463

URL الوصول: https://doaj.org/article/f40949cccc344b50a5660d71408edfbd

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

المصدر: PLoS ONE, Vol 19, Iss 1 (2024)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10760659/?tool=EBI; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/d3b3f63766534d318c7fedb6c16643ff

المؤلفون: Elizabeth J. Wilk, Timothy C. Howton, Jennifer L. Fisher, Vishal H. Oza, Ryan T. Brownlee, Kasi C. McPherson, Hannah L. Cleary, Bradley K. Yoder, James F. George, Michal Mrug, Brittany N. Lasseigne

المصدر: Molecular Medicine, Vol 29, Iss 1, Pp 1-21 (2023)

مصطلحات موضوعية: Polycystic kidney disease, PKD, ADPKD, Drug repurposing, Signature reversion, LINCS, Therapeutics. Pharmacology, RM1-950, Biochemistry, QD415-436

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1528-3658

URL الوصول: https://doaj.org/article/a29d831d0f624c96a1f2239ed4a5233e

المؤلفون: Vishal H. Oza, Jordan H. Whitlock, Elizabeth J. Wilk, Angelina Uno-Antonison, Brandon Wilk, Manavalan Gajapathy, Timothy C. Howton, Austyn Trull, Lara Ianov, Elizabeth A. Worthey, Brittany N. Lasseigne

المصدر: PLoS Computational Biology, Vol 19, Iss 1 (2023)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9815577/?tool=EBI; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/422f12071a604329b0212e9cd88c485b

المؤلفون: Jordan H. Whitlock, Timothy C. Howton, Elizabeth J. Wilk, Amanda D. Clark, Brittany N. Lasseigne

Relation: https://github.com/lasseignelab/230227_JW_Setbp1Manuscript; https://doi.org/10.5281/zenodo.8225612; https://doi.org/10.5281/zenodo.10479273; oai:zenodo.org:10479273

الاتاحة: https://doi.org/10.5281/zenodo.10479273

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/dataset/TF_activity_across_tissues_/24928465

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.s001
https://figshare.com/articles/dataset/TF_activity_across_tissues_/24928465

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/figure/Gene_expression_of_known_SETBP1_targets_across_GTEx_tissues_/24928480

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.g003
https://figshare.com/articles/figure/Gene_expression_of_known_SETBP1_targets_across_GTEx_tissues_/24928480

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/figure/Determining_optimal_k-means_clusters_/24928471

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.s003
https://figshare.com/articles/figure/Determining_optimal_k-means_clusters_/24928471

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/figure/Gene_expression_of_i_SETBP1_i_across_GTEx_tissues_/24928477

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.g002
https://figshare.com/articles/figure/Gene_expression_of_i_SETBP1_i_across_GTEx_tissues_/24928477

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/dataset/Target_clustering_and_correlations_/24928468

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.s002
https://figshare.com/articles/dataset/Target_clustering_and_correlations_/24928468

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/figure/Gene_expression_of_i_SETBP1_i_and_its_known_TF_targets_across_GTEx_tissues_/24928483

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.g004
https://figshare.com/articles/figure/Gene_expression_of_i_SETBP1_i_and_its_known_TF_targets_across_GTEx_tissues_/24928483

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/figure/Tissue-specific_TF_activity_of_SETBP1_and_TFs_it_targets_/24928486

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.g005
https://figshare.com/articles/figure/Tissue-specific_TF_activity_of_SETBP1_and_TFs_it_targets_/24928486

المؤلفون: Jordan H. Whitlock, Elizabeth J. Wilk, Timothy C. Howton, Amanda D. Clark, Brittany N. Lasseigne

مصطلحات موضوعية: Biochemistry, Medicine, Genetics, Molecular Biology, Developmental Biology, Cancer, Virology, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, various cellular processes, study provides insight, severe multisystemic abnormalities, known target genes, haploinsufficiency disorder (<, generate hypotheses related, functional enrichment analysis, framework enables researchers, div >< p, specific molecular signatures, specific mechanisms involving, >) gene encodes, shiny web application, diseased human tissues, tf activity analysis, germline variants cause, specific tf activity, web application, tf activity

Relation: https://figshare.com/articles/figure/Study_overview_/24928474

الاتاحة: https://doi.org/10.1371/journal.pone.0296328.g001
https://figshare.com/articles/figure/Study_overview_/24928474

المؤلفون: Victoria L. Flanary, Jennifer L. Fisher, Elizabeth J. Wilk, Timothy C. Howton, Brittany N. Lasseigne

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::279e1db314bb1aa7021af039e6795952
https://doi.org/10.20944/preprints202305.1637.v1

المؤلفون: Jennifer L. Fisher, Elizabeth J. Wilk, Vishal H. Oza, Timothy C. Howton, Victoria Flanary, Amanda D. Clark, Anita B. Hjelmeland, Brittany N. Lasseigne

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::78caf3d321d57b53aa5edd823145c1f8
https://doi.org/10.1101/2023.03.10.532074

المؤلفون: Jordan H. Whitlock, Timothy C. Howton, Elizabeth J. Wilk, Amanda D. Clark, Brittany N. Lasseigne

Relation: https://github.com/lasseignelab/230227_JW_Setbp1Manuscript; https://doi.org/10.5281/zenodo.8225612; https://doi.org/10.5281/zenodo.8239039; oai:zenodo.org:8239039

الاتاحة: https://doi.org/10.5281/zenodo.8239039

المؤلفون: Elizabeth J. Wilk, Timothy C. Howton, Jennifer L. Fisher, Vishal H. Oza, Ryan T. Brownlee, Brittany N. Lasseigne

Relation: https://github.com/lasseignelab/pkd_drugrepurposing/tree/v1.1.3; https://doi.org/10.5281/zenodo.6954715; https://doi.org/10.5281/zenodo.7640442; oai:zenodo.org:7640442

الاتاحة: https://doi.org/10.5281/zenodo.7640442

المؤلفون: Jordan H. Whitlock, Tabea M. Soelter, Vishal H. Oza, Elizabeth J. Wilk, Timothy C. Howton, Brittany N. Lasseigne

Relation: https://doi.org/10.5281/zenodo.8190948; https://doi.org/10.5281/zenodo.8190923; https://doi.org/10.5281/zenodo.8192481; https://doi.org/10.5281/zenodo.8192482; oai:zenodo.org:8192482

الاتاحة: https://doi.org/10.5281/zenodo.8192482