المؤلفون: Tiago Grego, Francisco M Couto

المصدر: PLoS ONE, Vol 8, Iss 5, p e62984 (2013)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC3642108?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/1063b1f8c471430a97f015881c8cca3f

المؤلفون: Typhaine Paysan-Lafosse, Matthias Blum, Sara Chuguransky, Tiago Grego, Beatriz Lázaro Pinto, Gustavo A Salazar, Maxwell L Bileschi, Peer Bork, Alan Bridge, Lucy Colwell, Julian Gough, Daniel H Haft, Ivica Letunić, Aron Marchler-Bauer, Huaiyu Mi, Darren A Natale, Christine A Orengo, Arun P Pandurangan, Catherine Rivoire, Christian J A Sigrist, Ian Sillitoe, Narmada Thanki, Paul D Thomas, Silvio C E Tosatto, Cathy H Wu, Alex Bateman

المصدر: Nucleic Acids Research. 51:D418-D427

مصطلحات موضوعية: Genetics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::153bbcbf1ab56d7f060b0d1aec9c1f19
https://doi.org/10.1093/nar/gkac993

المؤلفون: Kevin L Howe, Premanand Achuthan, James Allen, Jamie Allen, Jorge Alvarez-Jarreta, M Ridwan Amode, Irina M Armean, Andrey G Azov, Ruth Bennett, Jyothish Bhai, Konstantinos Billis, Sanjay Boddu, Mehrnaz Charkhchi, Carla Cummins, Luca Da Rin Fioretto, Claire Davidson, Kamalkumar Dodiya, Bilal El Houdaigui, Reham Fatima, Astrid Gall, Carlos Garcia Giron, Tiago Grego, Cristina Guijarro-Clarke, Leanne Haggerty, Anmol Hemrom, Thibaut Hourlier, Osagie G Izuogu, Thomas Juettemann, Vinay Kaikala, Mike Kay, Ilias Lavidas, Tuan Le, Diana Lemos, Jose Gonzalez Martinez, José Carlos Marugán, Thomas Maurel, Aoife C McMahon, Shamika Mohanan, Benjamin Moore, Matthieu Muffato, Denye N Oheh, Dimitrios Paraschas, Anne Parker, Andrew Parton, Irina Prosovetskaia, Manoj P Sakthivel, Ahamed I Abdul Salam, Bianca M Schmitt, Helen Schuilenburg, Dan Sheppard, Emily Steed, Michal Szpak, Marek Szuba, Kieron Taylor, Anja Thormann, Glen Threadgold, Brandon Walts, Andrea Winterbottom, Marc Chakiachvili, Ameya Chaubal, Nishadi De Silva, Bethany Flint, Adam Frankish, Sarah E Hunt, Garth R IIsley, Nick Langridge, Jane E Loveland, Fergal J Martin, Jonathan M Mudge, Joanella Morales, Emily Perry, Magali Ruffier, John Tate, David Thybert, Stephen J Trevanion, Fiona Cunningham, Andrew D Yates, Daniel R Zerbino, Paul Flicek.

Relation: https://zenodo.org/communities/gene-swtich; https://zenodo.org/communities/bovreg; https://zenodo.org/communities/eu; https://doi.org/10.1093/nar/gkaa942; oai:zenodo.org:7688906

الاتاحة: https://doi.org/10.1093/nar/gkaa942

المؤلفون: Catia Pesquita, Daniel Faria, Tiago Grego, Francisco Couto, Mário J. Silva

المساهمون: Repositório da Universidade de Lisboa

مصطلحات موضوعية: Computer Science

الاتاحة: http://hdl.handle.net/10451/15058

المؤلفون: Fabio C. P. Navarro, Jonathan M. Mudge, S. Mohanan, Adam Frankish, Joel Armstrong, Tiago Grego, Irwin Jungreis, Roderic Guigó, Jinrui Xu, Benedict Paten, Cristina Sisu, Daniel R. Zerbino, Julien Lagarde, Mark Diekhans, José M. González, Michael L. Tress, E. Stapleton, Osagie G. Izuogu, Mark Gerstein, Ian T. Fiddes, Toby Hunt, Sarah Donaldson, Marie Marthe Suner, Fernando Pozo, Andrew D. Yates, S. Carbonell Sala, T. Di Domenico, Matthew Hardy, Barbara Uszczynska-Ratajczak, Fiona Cunningham, Andrew Berry, Anne Parker, Laura Martinez, Alexandra Bignell, Bianca M. Schmitt, Yan Zhang, Jane E. Loveland, Baikang Pei, Jyoti S. Choudhary, F. C. Riera, Paul R. Muir, C. Garcia Giron, Tim Hubbard, Fergal J. Martin, Rory Johnson, Magali Ruffier, If Barnes, James C. Wright, I. Sycheva, Manolis Kellis, Carles Boix, Thibaut Hourlier, Paul Flicek, Maxim Y Wolf, Y. T. Yang, Kerstin Howe

المصدر: Frankish, Adam; Diekhans, Mark; Jungreis, Irwin; Lagarde, Julien; Loveland, Jane E; Mudge, Jonathan M; Sisu, Cristina; Wright, James C; Armstrong, Joel; Barnes, If; Berry, Andrew; Bignell, Alexandra; Boix, Carles; Carbonell Sala, Silvia; Cunningham, Fiona; Di Domenico, Tomás; Donaldson, Sarah; Fiddes, Ian T; García Girón, Carlos; Gonzalez, Jose Manuel; ... (2021). GENCODE 2021. Nucleic acids research, 49(D1), D916-D923. Oxford University Press 10.1093/nar/gkaa1087 <http://dx.doi.org/10.1093/nar/gkaa1087>
Nucleic Acids Research

مصطلحات موضوعية: Transcription, Genetic, AcademicSubjects/SCI00010, Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), 610 Medicine & health, Computational biology, Genome browser, Biology, Genome, Mice, 03 medical and health sciences, Annotation, 0302 clinical medicine, Databases, Genetic, Genetics, Database Issue, Animals, Humans, Ensembl, Epidemics, GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries), 030304 developmental biology, Internet, 0303 health sciences, SARS-CoV-2, GENCODE, COVID-19, Computational Biology, Molecular Sequence Annotation, Genomics, ComputingMethodologies_PATTERNRECOGNITION, Genome Biology, RNA, Long Noncoding, Pseudogenes, 030217 neurology & neurosurgery, Reference genome

وصف الملف: application/pdf; D916 - D923

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::749c9a56232ba7da42ed2dcfb66579fa
https://doi.org/10.1093/nar/gkaa1087

المؤلفون: Catia Pesquita, Daniel Faria, Tiago Grego, Francisco Couto, Mário J. Silva

مصطلحات موضوعية: Computer Science

Relation: http://hdl.handle.net/10451/15058; http://repositorio.ul.pt/handle/10455/6618

الاتاحة: http://hdl.handle.net/10451/15058
http://repositorio.ul.pt/handle/10455/6618

المؤلفون: Narmada Thanki, Silvio C. E. Tosatto, Ian Sillitoe, Lowri Williams, Swaathi Kandasaamy, Ivica Letunic, Sara Chuguransky, Matloob Qureshi, Matthias Blum, Robert D. Finn, Typhaine Paysan-Lafosse, Arun Prasad Pandurangan, Christian J. A. Sigrist, Marco Necci, Paul Thomas, Hsin-Yu Chang, Aron Marchler-Bauer, Huaiyu Mi, Peer Bork, Alex Bateman, Gift Nuka, Catherine Rivoire, Shriya Raj, Lorna Richardson, Daniel H. Haft, Gustavo A. Salazar, Tiago Grego, Julian Gough, Cathy H. Wu, Alan Bridge, Darren A. Natale, Alex L. Mitchell, Christine A. Orengo

المصدر: Nucleic Acids Research

مصطلحات موضوعية: InterPro, Protein family, AcademicSubjects/SCI00010, Protein domain, Sequence alignment, Biology, computer.software_genre, 03 medical and health sciences, Annotation, 0302 clinical medicine, Protein Domains, Genetics, Database Issue, Amino Acid Sequence, Protein Interaction Maps, Databases, Protein, 030304 developmental biology, Internet, 0303 health sciences, Database, SARS-CoV-2, Gene ontology, COVID-19, Proteins, Molecular Sequence Annotation, Sequence Alignment, computer, 030217 neurology & neurosurgery, InterProScan

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d5a52bbcb2483c8134a786cb2653dd19
http://hdl.handle.net/11577/3364881

المؤلفون: Andre Lamurias, Tiago Grego, Francisco M. Couto

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://xldb.fc.ul.pt/xldb/publications/Lamurias.etal:ChemicalCompoundAnd:2013_document.pdf.

مصطلحات موضوعية: Ontologies, Semantic Similarity, Conditial Random Fields, Ran- dom Forests, ChEBI

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.593.4443; http://xldb.fc.ul.pt/xldb/publications/Lamurias.etal:ChemicalCompoundAnd:2013_document.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.593.4443
http://xldb.fc.ul.pt/xldb/publications/Lamurias.etal:ChemicalCompoundAnd:2013_document.pdf

المؤلفون: Kevin L Howe, Premanand Achuthan, James Allen, Jamie Allen, Jorge Alvarez-Jarreta, M Ridwan Amode, Irina M Armean, Andrey G Azov, Ruth Bennett, Jyothish Bhai, Konstantinos Billis, Sanjay Boddu, Mehrnaz Charkhchi, Carla Cummins, Luca Da Rin Fioretto, Claire Davidson, Kamalkumar Dodiya, Bilal El Houdaigui, Reham Fatima, Astrid Gall, Carlos Garcia Giron, Tiago Grego, Cristina Guijarro-Clarke, Leanne Haggerty, Anmol Hemrom, Thibaut Hourlier, Osagie G Izuogu, Thomas Juettemann, Vinay Kaikala, Mike Kay, Ilias Lavidas, Tuan Le, Diana Lemos, Jose Gonzalez Martinez, José Carlos Marugán, Thomas Maurel, Aoife C McMahon, Shamika Mohanan, Benjamin Moore, Matthieu Muffato, Denye N Oheh, Dimitrios Paraschas, Anne Parker, Andrew Parton, Irina Prosovetskaia, Manoj P Sakthivel, Ahamed I Abdul Salam, Bianca M Schmitt, Helen Schuilenburg, Dan Sheppard, Emily Steed, Michal Szpak, Marek Szuba, Kieron Taylor, Anja Thormann, Glen Threadgold, Brandon Walts, Andrea Winterbottom, Marc Chakiachvili, Ameya Chaubal, Nishadi De Silva, Bethany Flint, Adam Frankish, Sarah E Hunt, Garth R IIsley, Nick Langridge, Jane E Loveland, Fergal J Martin, Jonathan M Mudge, Joanella Morales, Emily Perry, Magali Ruffier, John Tate, David Thybert, Stephen J Trevanion, Fiona Cunningham, Andrew D Yates, Daniel R Zerbino, Paul Flicek.

URL الوصول: https://explore.openaire.eu/search/publication?articleId=od______2659::92dd3b62513cd8b4c68666de9d24498b
https://zenodo.org/record/7688906

المؤلفون: Fiona Cunningham, Premanand Achuthan, Wasiu Akanni, James Allen, M Ridwan Amode, Irina M Armean, Ruth Bennett, Jyothish Bhai, Konstantinos Billis, Sanjay Boddu, Carla Cummins, Claire Davidson, Kamalkumar Jayantilal Dodiya, Astrid Gall, Carlos García Girón, Laurent Gil, Tiago Grego, Leanne Haggerty, Erin Haskell, Thibaut Hourlier, Osagie G Izuogu, Sophie H Janacek, Thomas Juettemann, Mike Kay, Matthew R Laird, Ilias Lavidas, Zhicheng Liu, Jane E Loveland, José C Marugán, Thomas Maurel, Aoife C McMahon, Benjamin Moore, Joannella Morales, Jonathan M Mudge, Michael Nuhn, Denye Ogeh, Anne Parker, Andrew Parton, Mateus Patricio, Ahamed Imran Abdul Salam, Bianca M Schmitt, Helen Schuilenburg, Dan Sheppard, Helen Sparrow, Eloise Stapleton, Marek Szuba, Kieron Taylor, Glen Threadgold, Anja Thormann, Alessandro Vullo, Brandon Walts, Andrea Winterbottom, Amonida Zadissa, Marc Chakiachvili, Adam Frankish, Sarah E Hunt, Myrto Kostadima, Nick Langridge, Fergal J Martin, Matthieu Muffato, Emily Perry, Magali Ruffier, Daniel M Staines, Stephen J Trevanion, Bronwen L Aken, Andrew D Yates, Daniel R Zerbino, Paul Flicek

المصدر: Nucleic Acids Research

مصطلحات موضوعية: 0301 basic medicine, Genome, Computational Biology, Molecular Sequence Annotation, Genomics, 03 medical and health sciences, Mice, 030104 developmental biology, 0302 clinical medicine, ComputingMethodologies_PATTERNRECOGNITION, Databases, Genetic, Vertebrates, Genetics, Database Issue, Animals, Humans, 030217 neurology & neurosurgery, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42bb0745f5f44e984bb1f2bbfd9fda58
http://europepmc.org/articles/PMC6323964

المؤلفون: Rory Johnson, Fernando Pozo, Andrew D. Yates, Magali Ruffier, Alexandra Bignell, Anne Parker, Adam Frankish, Osagie G. Izuogu, If Barnes, Jose Manuel Gonzalez, Tomás Di Domenico, Irwin Jungreis, Cristina Sisu, Fergal J. Martin, Anne-Maud Ferreira, Paul R. Muir, Benedict Paten, Matthew P. Hardy, Manolis Kellis, Jacqueline Chrast, Jane E. Loveland, Yan Zhang, Michael L. Tress, Fabio C. P. Navarro, Barbara Uszczynska-Ratajczak, Jonathan M. Mudge, Mark Diekhans, Shamika Mohanan, James C. Wright, Fiona Cunningham, Toby Hunt, Baikang Pei, Jinuri Xu, Tim Hubbard, Julien Lagarde, Roderic Guigó, Alexandre Reymond, Silvia Carbonell Sala, Bianca M. Schmitt, Sarah Donaldson, Mark Gerstein, Jyoti S. Choudhary, Eloise Stapleton, Bronwen Aken, Laura Martinez, Tiago Grego, Ian T. Fiddes, Joel Armstrong, Carlos García Girón, Marie-Marthe Suner, Paul Flicek, Andrew Berry, Irina Sycheva, Thibaut Hourlier, Daniel R. Zerbino

المساهمون: Wellcome Trust, European Molecular Biology Organization, NIH - National Human Genome Research Institute (NHGRI) (Estados Unidos), Swiss National Science Foundation

المصدر: Frankish, Adam; Diekhans, Mark; Ferreira, Anne-Maud; Johnson, Rory Baldwin; Jungreis, Irwin; Loveland, Jane; Mudge, Jonathan M; Sisu, Cristina; Wright, James; Armstrong, Joel; Barnes, If; Berry, Andrew; Bignell, Alexandra; Carbonell Sala, Silvia; Chrast, Jacqueline; Cunningham, Fiona; Di Domenico, Tomás; Donaldson, Sarah; Fiddes, Ian T; García Girón, Carlos; ... (2019). GENCODE reference annotation for the human and mouse genomes. Nucleic acids research, 47(D1), D766-D773. Oxford University Press 10.1093/nar/gky955 <http://dx.doi.org/10.1093/nar/gky955>
Repisalud
Instituto de Salud Carlos III (ISCIII)
Recercat. Dipósit de la Recerca de Catalunya
instname
Nucleic Acids Research
Nucleic acids research, vol. 47, no. D1, pp. D766-D773

مصطلحات موضوعية: DNA ELEMENTS, GENES, PROTEINS, DATABASE, 610 Medicine & health, Genomics, Computational biology, Biology, LONG NONCODING RNAS, Genome, Mice, 03 medical and health sciences, Annotation, 0302 clinical medicine, Databases, Genetic, PROGRAM, Genetics, Database Issue, Animals, Humans, Ensembl, 030304 developmental biology, Internet, 0303 health sciences, IDENTIFICATION, Genome, Human, GENCODE, Computational Biology, Genome, Human/genetics, Molecular Sequence Annotation, Pseudogenes/genetics, Software, Gene Annotation, PRINCIPAL, ENCYCLOPEDIA, CATALOG, 3. Good health, ComputingMethodologies_PATTERNRECOGNITION, Human genome, Pseudogenes, 030217 neurology & neurosurgery

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e181df58a8de4f0403a4a267189a4855
https://doi.org/10.1093/nar/gky955

المؤلفون: Francisco M. Couto, Tiago Grego, Rafael Torres, Pablo Sanchez, Leandro Pascual, Christian Blaschke

مصطلحات موضوعية: Computer Science

Relation: http://hdl.handle.net/10451/15040; http://repositorio.ul.pt/handle/10455/6601

الاتاحة: http://hdl.handle.net/10451/15040
http://repositorio.ul.pt/handle/10455/6601

المؤلفون: Francisco Couto, Tiago Grego, Catia Pesquita, Hugo Bastos, R. Torres, P. Sanchez, L. Pascual, C. Blaschke

مصطلحات موضوعية: Computer Science

Relation: http://hdl.handle.net/10451/15001; http://repositorio.ul.pt/handle/10455/6566

الاتاحة: http://hdl.handle.net/10451/15001
http://repositorio.ul.pt/handle/10455/6566

المؤلفون: Hugo Bastos, Tiago Grego, Francisco Couto, Pedro M. Coutinho

مصطلحات موضوعية: Computer Science

Relation: http://hdl.handle.net/10451/14992; http://repositorio.ul.pt/handle/10455/6558

الاتاحة: http://hdl.handle.net/10451/14992
http://repositorio.ul.pt/handle/10455/6558

المؤلفون: Tiago Grego, Piotr Pezik, Francisco Couto, Dietrich Rebholz-Schuhmann

مصطلحات موضوعية: Computer Science

Relation: http://hdl.handle.net/10451/14826; http://repositorio.ul.pt/handle/10455/6409

الاتاحة: http://hdl.handle.net/10451/14826
http://repositorio.ul.pt/handle/10455/6409

المؤلفون: M. Sousa, J. Ousingsawat, R. Seitz, S. Puntheeranurak, A. Regalado, A. Schmidt, Tiago Grego, C. Jansakul, M. D. Amaral, R. Schreiber, K. Kunzelmann

مصطلحات موضوعية: Computer Science

Relation: 71;1; http://hdl.handle.net/10451/14755; http://repositorio.ul.pt/handle/10455/6345

الاتاحة: http://hdl.handle.net/10451/14755
http://repositorio.ul.pt/handle/10455/6345

المؤلفون: Catia Pesquita, Tiago Grego, Francisco M. Couto

مصطلحات موضوعية: Computer Science

Relation: http://hdl.handle.net/10451/14453; http://repositorio.ul.pt/handle/10455/6071

الاتاحة: http://hdl.handle.net/10451/14453
http://repositorio.ul.pt/handle/10455/6071

المؤلفون: Tiago Grego, Piotr Pęzik, Francisco M. Couto, Dietrich Rebholz-schuhmann

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://xldb.fc.ul.pt/xldb/publications/Couto:IdentifyingBioentityRecognition:2008_document.pdf.

مصطلحات موضوعية: Chemical Named Entity Recognition, Conditional Random Fields, Text Mining

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.367.7723; http://xldb.fc.ul.pt/xldb/publications/Couto:IdentifyingBioentityRecognition:2008_document.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.367.7723
http://xldb.fc.ul.pt/xldb/publications/Couto:IdentifyingBioentityRecognition:2008_document.pdf

المؤلفون: William C. Skarnes, Sajith Perera, Roxana C. Mustata, Katie Tremble, José C. R. Silva, Tiago Grego, Katie Andrews, Jihoon Kim, Juergen Fink, Alessandra Merenda, Bon-Kyoung Koo, Amanda Andersson-Rolf

المساهمون: Rebelo Da Silva, Jose [0000-0001-5487-1117], Apollo - University of Cambridge Repository

المصدر: Nature methods

مصطلحات موضوعية: 0301 basic medicine, Biology, Biochemistry, Article, Cell Line, Gene Knockout Techniques, Mice, 03 medical and health sciences, Animals, Humans, Clustered Regularly Interspaced Short Palindromic Repeats, Allele, Molecular Biology, Gene, health care economics and organizations, Embryonic Stem Cells, beta Catenin, Gene knockout, Gene Editing, Genetics, Genome, Cell Biology, 3. Good health, enzymes and coenzymes (carbohydrates), HEK293 Cells, 030104 developmental biology, embryonic structures, CRISPR-Cas Systems, Biotechnology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::549a5ba59c7d949d22411a908bcaca9e
https://doi.org/10.1038/nmeth.4156

المؤلفون: Alex Hodgkins, Sajith Perera, Vivek Iyer, Tiago Grego, David J. Parry-Smith, William C. Skarnes, Anna Farne

المصدر: Bioinformatics

مصطلحات موضوعية: Statistics and Probability, Databases, Factual, Databases and Ontologies, Genetic Vectors, Genome browser, Biology, computer.software_genre, Biochemistry, Genome, Genome engineering, Mice, Genome editing, CRISPR, Animals, Humans, Clustered Regularly Interspaced Short Palindromic Repeats, Molecular Biology, Gene, Exome sequencing, Database, Applications Notes, Computer Science Applications, Computational Mathematics, Computational Theory and Mathematics, Gene Expression Regulation, RNA editing, RNA Editing, CRISPR-Cas Systems, computer, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::886400a46e5dabf4fe72dfad85cae27f
http://europepmc.org/articles/PMC4565030