المؤلفون: Déborah Merda, Meryl Vila-Nova, Mathilde Bonis, Anne-Laure Boutigny, Thomas Brauge, Marina Cavaiuolo, Amandine Cunty, Antoine Regnier, Maroua Sayeb, Noémie Vingadassalon, Claire Yvon, Virginie Chesnais

المصدر: BMC Genomics, Vol 25, Iss 1, Pp 1-13 (2024)

مصطلحات موضوعية: cgMLST, Genome assembly, Bioinformatics tool variability, Data comparability, Biotechnology, TP248.13-248.65, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2164

URL الوصول: https://doaj.org/article/bf2b66771b624a7fbc6df9da9ea2d65c

المؤلفون: Erwan Bourdonnais, Arnaud Briet, Thomas Brauge, Sabine Debuiche, Nicolas Helsens, Sophie A. Granier, Graziella Midelet

المصدر: Microbiology Spectrum, Vol 12, Iss 7 (2024)

مصطلحات موضوعية: Vibrio parahaemolyticus, antimicrobial resistance, phenotype, epidemiological cutoff, shrimps, whole-genome sequencing, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2165-0497

URL الوصول: https://doaj.org/article/b1834df706a948e39168e49bcd7e13f9

المؤلفون: Erwan Bourdonnais, Cédric Le Bris, Thomas Brauge, Graziella Midelet

المصدر: Frontiers in Microbiology, Vol 15 (2024)

مصطلحات موضوعية: antimicrobial resistance, indicator genes, phytoplankton, zooplankton, marine environment, environmental factors, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2024.1313056/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/f7cb9613601746119acd974ebe27c9ee

المؤلفون: Julia Mougin, Graziella Midelet, Sophie Leterme, Giles Best, Timothy Ells, Alyssa Joyce, Harriet Whiley, Thomas Brauge

المصدر: Frontiers in Microbiology, Vol 14 (2024)

مصطلحات موضوعية: benzalkonium chloride, biocide, Vibrio, biofilm, viability, c-di-GMP, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2023.1309032/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/86b94e063a284c38ad25018a58ee6678

المؤلفون: Thomas Brauge, Guylaine Leleu, Aurélie Hanin, Karine Capitaine, Benjamin Felix, Graziella Midelet

المصدر: Heliyon, Vol 9, Iss 7, Pp e18154- (2023)

مصطلحات موضوعية: Listeria monocytogenes, Seafood, Europe, France, Clonal complex, Salmon, Science (General), Q1-390, Social sciences (General), H1-99

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405844023053628; https://doaj.org/toc/2405-8440

URL الوصول: https://doaj.org/article/f1bd4891f4e2414eaeee00760948f604

المؤلفون: Benjamin Félix, Karine Capitaine, Sandrine Te, Arnaud Felten, Guillaume Gillot, Carole Feurer, Tijs van den Bosch, Marina Torresi, Zsuzsanna Sréterné Lancz, Sabine Delannoy, Thomas Brauge, Graziella Midelet, Jean-Charles Leblanc, Sophie Roussel

المصدر: Microbiology Spectrum, Vol 11, Iss 3 (2023)

مصطلحات موضوعية: Listeria monocytogenes, MLST, food, food processing environment, high-throughput real-time PCR, clonal complexes, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2165-0497

URL الوصول: https://doaj.org/article/c516b404b5f640279b185e2b0b94125e

المؤلفون: Sylvain Trigueros, Thomas Brauge, Tommy Dedole, Sabine Debuiche, Véronique Rebuffel, Sophie Morales, Pierre R. Marcoux, Graziella Midelet

المصدر: PLoS ONE, Vol 18, Iss 3 (2023)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9997870/?tool=EBI; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/9560f1c067a642a08725748df43f6489

المؤلفون: Erwan Bourdonnais, Darina Colcanap, Cédric Le Bris, Thomas Brauge, Graziella Midelet

المصدر: Frontiers in Microbiology, Vol 13 (2022)

مصطلحات موضوعية: antimicrobial resistance genes, contamination indicator genes, seawater, qPCR, environmental factors, mobile genetic element, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.883081/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/90a03e4d0de74df0929a17c8f3d2c59e

المؤلفون: Federica Palma, Thomas Brauge, Nicolas Radomski, Ludovic Mallet, Arnaud Felten, Michel-Yves Mistou, Anne Brisabois, Laurent Guillier, Graziella Midelet-Bourdin

المصدر: BMC Genomics, Vol 21, Iss 1, Pp 1-20 (2020)

مصطلحات موضوعية: Listeria monocytogenes, Persistent clones, Food processing plant, Comparative genomics, Mobile genetic elements, Horizontal plasmid transfer, Biotechnology, TP248.13-248.65, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2164

URL الوصول: https://doaj.org/article/c214ace04aa94e778bb6e644561ab4af

المؤلفون: Thomas Brauge, Sylvain Trigueros, Arnaud Briet, Sabine Debuiche, Guylaine Leleu, Benoit Gassilloud, Amandine Wilhelm, Jean-Sébastien Py, Graziella Midelet

المصدر: Frontiers in Marine Science, Vol 8 (2021)

مصطلحات موضوعية: marine microbiology, seafood, sea water, ecology, bacterial identification, 16s rDNA sequencing, Science, General. Including nature conservation, geographical distribution, QH1-199.5

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2021.650116/full; https://doaj.org/toc/2296-7745

URL الوصول: https://doaj.org/article/e85adf6bb75445969bddd472d3ec5ffc

المؤلفون: Sabine Delannoy, Corine Hoffer, Raphaëlle Youf, Emilie Dauvergne, Hattie E. Webb, Thomas Brauge, Mai-Lan Tran, Graziella Midelet, Sophie A. Granier, Marisa Haenni, Patrick Fach, Anne Brisabois

المصدر: Microorganisms, Vol 10, Iss 6, p 1225 (2022)

مصطلحات موضوعية: antimicrobial resistance genes, mobile genetic elements, seafood bacteria, Gram-negative species, high throughput qPCR, micro-array, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.mdpi.com/2076-2607/10/6/1225; https://doaj.org/toc/2076-2607

URL الوصول: https://doaj.org/article/98b3e918176c4b5fbac1e265b7a1ba2b

المؤلفون: Thomas Brauge, Christine Faille, Irina Sadovskaya, Alain Charbit, Thierry Benezech, Yang Shen, Martin J Loessner, Jean Romain Bautista, Graziella Midelet-Bourdin

المصدر: PLoS ONE, Vol 13, Iss 1, p e0190879 (2018)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC5761963?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/b190bb42f19f47209f66b550477834bd

المؤلفون: Erwan Bourdonnais, Cédric Le Bris, Thomas Brauge, Graziella Midelet

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, antimicrobial resistance, indicator genes, phytoplankton, zooplankton, marine environment, environmental factors

Relation: https://figshare.com/articles/dataset/Table_1_Monitoring_indicator_genes_to_assess_antimicrobial_resistance_contamination_in_phytoplankton_and_zooplankton_communities_from_the_English_Channel_and_the_North_Sea_docx/25187615

الاتاحة: https://doi.org/10.3389/fmicb.2024.1313056.s001
https://figshare.com/articles/dataset/Table_1_Monitoring_indicator_genes_to_assess_antimicrobial_resistance_contamination_in_phytoplankton_and_zooplankton_communities_from_the_English_Channel_and_the_North_Sea_docx/25187615

المؤلفون: Thomas BRAUGE, Stéphanie COPIN, Mélanie GAY, Graziella MIDELET

المصدر: Hazards in the Food Processing and Distribution Chain. :57-101

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::23936f16ebe47cb98e07b72a79747aea
https://doi.org/10.1002/9781394173822.ch2

المؤلفون: Thomas BRAUGE, Stéphanie COPIN, Mélanie GAY, Graziella MIDELET

المصدر: Les dangers dans la chaîne de transformation et de distribution des denrées alimentaires ISBN: 9781789480931

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::180bbff5a0eed98c5867e56522620324
https://doi.org/10.51926/iste.9093.ch2

المؤلفون: Erwan Bourdonnais, Darina Colcanap, Cédric Le Bris, Thomas Brauge, Graziella Midelet

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, antimicrobial resistance genes, contamination indicator genes, seawater, qPCR, environmental factors, mobile genetic element

Relation: https://figshare.com/articles/dataset/Table_1_Occurrence_of_Indicator_Genes_of_Antimicrobial_Resistance_Contamination_in_the_English_Channel_and_North_Sea_Sectors_and_Interactions_With_Environmental_Variables_docx/19773169

الاتاحة: https://doi.org/10.3389/fmicb.2022.883081.s001
https://figshare.com/articles/dataset/Table_1_Occurrence_of_Indicator_Genes_of_Antimicrobial_Resistance_Contamination_in_the_English_Channel_and_North_Sea_Sectors_and_Interactions_With_Environmental_Variables_docx/19773169

المؤلفون: Maureen Duflot, Thomas Setbon, Graziella Midelet, Thomas Brauge, Mélanie Gay

المصدر: Journal of microbiological methods. 187

مصطلحات موضوعية: Microbiology (medical), Heterophyidae, Microbiology, DNA, Mitochondrial, DNA, Ribosomal, Polymerase Chain Reaction, Electron Transport Complex IV, 03 medical and health sciences, DNA, Ribosomal Spacer, Animals, Opisthorchis viverrini, Internal transcribed spacer, Molecular Biology, Gene, Genes, Helminth, Phylogeny, 030304 developmental biology, DNA Primers, 0303 health sciences, Clonorchis sinensis, biology, 030306 microbiology, Opisthorchidae, Ribosomal RNA, DNA, Helminth, biology.organism_classification, Opisthorchiidae, Random Amplified Polymorphic DNA Technique, Molecular Diagnostic Techniques, Evolutionary biology, Identification (biology), Parasitology, Trematoda, Nucleic Acid Amplification Techniques, Polymorphism, Restriction Fragment Length

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7f1fba9104aad6eddef52c7d26b01b2c
https://pubmed.ncbi.nlm.nih.gov/34082051

المؤلفون: Ludovic Mallet, Graziella Midelet-Bourdin, Federica Palma, Thomas Brauge, Anne Brisabois, Nicolas Radomski, Michel-Yves Mistou, Arnaud Felten, Laurent Guillier

المساهمون: Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), Mathématiques et Informatique Appliquées du Génome à l'Environnement [Jouy-En-Josas] (MaIAGE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), European Project: 643476,H2020,H2020-PHC-2014-single-stage,COMPARE(2014), Laboratoire de sécurité des aliments de Maisons-Alfort (LSAl), Laboratoire de Boulogne sur mer

المصدر: BMC Genomics
BMC Genomics, 2020, 21 (1), pp.130. ⟨10.1186/s12864-020-6544-x⟩
BMC Genomics, BioMed Central, 2020, 21 (1), ⟨10.1186/s12864-020-6544-x⟩
BMC Genomics, Vol 21, Iss 1, Pp 1-20 (2020)
BMC Genomics, 2020, 21 (1), ⟨10.1186/s12864-020-6544-x⟩

مصطلحات موضوعية: Food processing plant, Prophage profiling, Prophages, [SDV]Life Sciences [q-bio], medicine.disease_cause, MESH: Listeria monocytogenes, Persistent clones, Plasmid, Genomic island, Phylogeny, 2. Zero hunger, Genetics, 0303 health sciences, Genomics, Horizontal gene transfer, France, Plasmids, Research Article, Biotechnology, lcsh:QH426-470, Genomic Islands, Horizontal plasmid transfer, lcsh:Biotechnology, Biology, Polymorphism, Single Nucleotide, 03 medical and health sciences, Listeria monocytogenes, Stress, Physiological, lcsh:TP248.13-248.65, medicine, Food-Processing Industry, Prophage, 030304 developmental biology, Comparative genomics, 030306 microbiology, biology.organism_classification, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, Interspersed Repetitive Sequences, lcsh:Genetics, Seafood, Genes, Bacterial, Mobile genetic elements, Listeria, Genome, Bacterial

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0afa41bcb6b2021642883b0b3f48bfac
https://hal.inrae.fr/hal-04151252

المؤلفون: Thierry Grard, Denis Watier, Jé r ô me Cleach, Guillaume Duflos, Bruno Le Fur, Thomas Brauge, Philippe Lencel

المساهمون: Université du Littoral Côte d'Opale (ULCO), Plate Forme d'Innovations Nouvelles Vagues, Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), Pole Metropolitain de la Cote d'Opale council, PFI Nouvelles Vagues, French government, Hauts-de-France region of the CPER 2014-2020 MARCO project, FranceAgrimer, Institut National de la Recherche Agronomique (INRA), Biochimie des Produits Aquatiques (BPA), Université du Littoral Côte d'Opale (ULCO)-Transfrontalière BioEcoAgro - UMR 1158 (BioEcoAgro), Université d'Artois (UA)-Université de Liège-Université de Picardie Jules Verne (UPJV)-Université du Littoral Côte d'Opale (ULCO)-Université de Lille-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-JUNIA (JUNIA), Université catholique de Lille (UCL)-Université catholique de Lille (UCL)-Université d'Artois (UA)-Université de Liège-Université de Picardie Jules Verne (UPJV)-Université du Littoral Côte d'Opale (ULCO)-Université de Lille-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-JUNIA (JUNIA), Université catholique de Lille (UCL)-Université catholique de Lille (UCL)

المصدر: World Journal of Microbiology and Biotechnology
World Journal of Microbiology and Biotechnology, Springer Verlag, 2018, 28 (11), pp.1782-1790. ⟨10.4014/jmb.1804.04048⟩
World Journal of Microbiology and Biotechnology, 2018, 28 (11), pp.1782-1790. ⟨10.4014/jmb.1804.04048⟩

مصطلحات موضوعية: 0301 basic medicine, Bacterial viability, [SDV]Life Sciences [q-bio], 030106 microbiology, Ionophore, Applied Microbiology and Biotechnology, Rhodamine 123, Fluorescence spectroscopy, Membrane Potentials, 03 medical and health sciences, chemistry.chemical_compound, Escherichia coli, Fluorescence microscope, Fluorescent Dyes, Membrane potential, Microbial Viability, Ionophores, Chemistry, Spectrofluorometer, General Medicine, Fluorescence, Spectrometry, Fluorescence, Biophysics, fluorescence techniques, membrane potential, Cytometry, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0e5fecd4ac864925601367ddfb5f42d
https://doi.org/10.4014/jmb.1804.04048

المؤلفون: Thomas Brauge (4752789), Sylvain Trigueros (10714515), Arnaud Briet (10714518), Sabine Debuiche (10714521), Guylaine Leleu (10714524), Benoit Gassilloud (10714527), Amandine Wilhelm (10714530), Jean-Sébastien Py (10714533), Graziella Midelet (10714536)

مصطلحات موضوعية: Oceanography, Marine Biology, Marine Geoscience, Biological Oceanography, Chemical Oceanography, Physical Oceanography, Marine Engineering, marine microbiology, seafood, sea water, ecology, bacterial identification, 16s rDNA sequencing, food pathogens and spoilage, MALDI-TOF MS

Relation: https://figshare.com/articles/dataset/Table_1_MALDI-TOF_Mass_Spectrometry_Fingerprinting_Performance_Versus_16S_rDNA_Sequencing_to_Identify_Bacterial_Microflora_From_Seafood_Products_and_Sea_Water_Samples_XLSX/14500137

الاتاحة: https://doi.org/10.3389/fmars.2021.650116.s001