نتائج البحث - "Susan M Grimes"

1

Academic Journal

GITR and TIGIT immunotherapy provokes divergent multicellular responses in the tumor microenvironment of gastrointestinal cancers

المؤلفون: Anuja Sathe, Carlos Ayala, Xiangqi Bai, Susan M. Grimes, Byrne Lee, Cindy Kin, Andrew Shelton, George Poultsides, Hanlee P. Ji

المصدر: Genome Medicine, Vol 15, Iss 1, Pp 1-25 (2023)

مصطلحات موضوعية: GITR, TIGIT, Tumor microenvironment, scRNA-seq, Gastric cancer, Colon cancer, Medicine, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1756-994X

URL الوصول: https://doaj.org/article/8cfb40beda144e8e8bef760c00d5144c

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2

Academic Journal

Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

المؤلفون: Billy T. Lau, Alison Almeda, Marie Schauer, Madeline McNamara, Xiangqi Bai, Qingxi Meng, Mira Partha, Susan M. Grimes, HoJoon Lee, Gregory M. Heestand, Hanlee P. Ji

المصدر: Genome Medicine, Vol 15, Iss 1, Pp 1-13 (2023)

مصطلحات موضوعية: Methylation, Single-molecule sequencing, Nanopore, Cell-free DNA, Medicine, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1756-994X

URL الوصول: https://doaj.org/article/e323638932ce446b90aecb9fb1f4e521

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3

Academic Journal

Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

المؤلفون: Heon Seok Kim, Susan M. Grimes, Anna C. Hooker, Billy T. Lau, Hanlee P. Ji

المصدر: Genome Biology, Vol 22, Iss 1, Pp 1-16 (2021)

مصطلحات موضوعية: Single-cell long-read CRISPR screen, Single-cell CRISPR screen, Single-cell long-read sequencing, Single-cell sequencing, Alternative splicing, Transcript isoform, Biology (General), QH301-705.5, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1474-760X

URL الوصول: https://doaj.org/article/8e4adc221d104b4abcfdbff4a0f35b39

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4

Academic Journal

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

المؤلفون: GiWon Shin, Stephanie U. Greer, Erik Hopmans, Susan M. Grimes, HoJoon Lee, Lan Zhao, Laura Miotke, Carlos Suarez, Alison F. Almeda, Sigurdis Haraldsdottir, Hanlee P. Ji

المصدر: Genome Medicine, Vol 13, Iss 1, Pp 1-18 (2021)

مصطلحات موضوعية: Microsatellite instability, Sequence tandem repeats, Chromosomal instability, Colorectal cancer, DNA mismatch repair, Medicine, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1756-994X

URL الوصول: https://doaj.org/article/f712076aec7c479ebafdae1d3b8bdf16

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5

Academic Journal

ALTEN: A High‐Fidelity Primary Tissue‐Engineering Platform to Assess Cellular Responses Ex Vivo

المصدر: Advanced Science, Vol 9, Iss 21, Pp n/a-n/a (2022)

مصطلحات موضوعية: alginate, ex vivo drug screening, single‐cell RNAseq, three dimensional culture, tissue microenvironment, whole‐tissue organoids, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2198-3844

URL الوصول: https://doaj.org/article/7c01605cf8c442bb9c5423b06b6545f3

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6

Academic Journal

Additional file 1 of Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

المؤلفون: GiWon Shin (11396840), Stephanie U. Greer (11396843), Erik Hopmans (13236), Susan M. Grimes (11396846), HoJoon Lee (3581495), Lan Zhao (5713), Laura Miotke (788767), Carlos Suarez (3413279), Alison F. Almeda (11396849), Sigurdis Haraldsdottir (11396852), Hanlee P. Ji (10670145)

مصطلحات موضوعية: Biochemistry, Cell Biology, Genetics, Molecular Biology, Biotechnology, Evolutionary Biology, Cancer, Computational Biology, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Microsatellite instability, Sequence tandem repeats, Chromosomal instability, Colorectal cancer, DNA mismatch repair

Relation: https://figshare.com/articles/journal_contribution/Additional_file_1_of_Profiling_diverse_sequence_tandem_repeats_in_colorectal_cancer_reveals_co-occurrence_of_microsatellite_and_chromosomal_instability_involving_Chromosome_8/16575350

الاتاحة: https://doi.org/10.6084/m9.figshare.16575350.v1

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7

The Gastric Cancer Registry: A Genomic Translational Resource for Multidisciplinary Research in Gastric Cancer

المؤلفون: Alison F. Almeda, Susan M. Grimes, HoJoon Lee, Stephanie Greer, GiWon Shin, Madeline McNamara, Anna C. Hooker, Maya M. Arce, Matthew Kubit, Marie C. Schauer, Paul Van Hummelen, Cindy Ma, Meredith A. Mills, Robert J. Huang, Joo Ha Hwang, Manuel R. Amieva, Summer S. Han, James M. Ford, Hanlee P. Ji

المصدر: Cancer Epidemiology, Biomarkers & Prevention. 31:1693-1700

مصطلحات موضوعية: Oncology, Stomach Neoplasms, Epidemiology, Interdisciplinary Research, Humans, Genomics, Registries, Germ-Line Mutation, Information Systems

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e2420a3df45c56f266d55015be6caf5
https://doi.org/10.1158/1055-9965.epi-22-0308

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8

Academic Journal

CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

المؤلفون: GiWon Shin, Susan M. Grimes, HoJoon Lee, Billy T. Lau, Li C. Xia, Hanlee P. Ji

المصدر: Nature Communications, Vol 8, Iss 1, Pp 1-13 (2017)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/1fd514e535d042ffa2a18a3e8a9b6a4c

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9

KmerKeys: a web resource for searching indexed genome assemblies and variants

المؤلفون: Dmitri S. Pavlichin, Susan M. Grimes, Hong-pyo Lee, Hanlee P. Ji, Tsachy Weissman, Stephanie U. Greer

المصدر: Nucleic Acids Research. 50:W448-W453

مصطلحات موضوعية: education.field_of_study, Information retrieval, business.industry, Computer science, Search engine indexing, Population, Sequence assembly, Data structure, Genome, Hash table, Metadata, Genetics, Web application, business, education

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::834f9a661b87884a8b1a3feaa0c08244
https://doi.org/10.1093/nar/gkac266

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10

Data from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1398bb673a98eac13ed96385938a01a3
https://doi.org/10.1158/1078-0432.c.6532742

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11

Supplementary Figure 5 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::19a2321e5f08ebd99f9e2ddfd22204ad
https://doi.org/10.1158/1078-0432.22488494.v1

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12

Supplementary Figure 2 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::217d4553db79202d2a7e6f2d6c90d5ba
https://doi.org/10.1158/1078-0432.22488503.v1

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13

Supplementary Figure 1 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::03bc8c535fe857d7a3349b9edba858e2
https://doi.org/10.1158/1078-0432.22488506.v1

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14

Supplementary Figure 6 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0a8e1d1c63cf188566b06f14a12bd819
https://doi.org/10.1158/1078-0432.22488491

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15

Supplementary Figure 3 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ad1d1422b0494120071d65a128100ec
https://doi.org/10.1158/1078-0432.22488500.v1

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16

Supplementary Figure 4 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::381a065b5db3e7ec93132806d1aa5547
https://doi.org/10.1158/1078-0432.22488497.v1

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17

Supplemental Tables 1-8 from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

المؤلفون: Hanlee P. Ji, Nancy R. Zhang, George Poultsides, Quan Nguyen, Carlos J. Suarez, HoJoon Lee, Xiao Tan, Andrew Su, Xiangqi Bai, Billy T. Lau, Zilu Zhou, Susan M. Grimes, Kaishu Mason, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cc32a177d6430421b1dad23170cec535
https://doi.org/10.1158/1078-0432.22488509.v1

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18

Data from Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment

المؤلفون: Hanlee P. Ji, George Poultsides, Robert J. Huang, Carlos Suarez, Jiamin Chen, Billy T. Lau, Susan M. Grimes, Anuja Sathe

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2500a91bd0f48bc7b2e49eaf837b8777
https://doi.org/10.1158/1078-0432.c.6529886.v1

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19

Single cell and spatial alternative splicing analysis with long read sequencing

المؤلفون: Nancy Zhang, Yuntian Fu, Heonseok Kim, Jenea Adams, Susan M Grimes, Sijia Huang, Billy Lau, Anuja Sathe, Paul Hess, Hanlee Ji

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::371f0148457b10e5de4f41cb02382f77
https://doi.org/10.21203/rs.3.rs-2674892/v1

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20

GITR and TIGIT immunotherapy provokes divergent multi-cellular responses in the tumor microenvironment of gastrointestinal cancers

المؤلفون: Anuja Sathe, Carlos Ayala, Xiangqi Bai, Susan M. Grimes, Byrne Lee, Cindy Kin, Andrew Shelton, George Poultsides, Hanlee P. Ji

المصدر: bioRxiv

مصطلحات موضوعية: Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c8cdf742954c7e24d307e62c58f54495
https://europepmc.org/articles/PMC10054933/

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