المؤلفون: Gull, Nicole, Jones, Michelle R, Peng, Pei-Chen, Coetzee, Simon G, Silva, Tiago C, Plummer, Jasmine T, Reyes, Alberto Luiz P, Davis, Brian D, Chen, Stephanie S, Lawrenson, Kate, Lester, Jenny, Walsh, Christine, Rimel, Bobbie J, Li, Andrew J, Cass, Ilana, Berg, Yonatan, Govindavari, John-Paul B, Rutgers, Joanna KL, Berman, Benjamin P, Karlan, Beth Y, Gayther, Simon A

المصدر: Journal of Experimental & Clinical Cancer Research. 41(1)

مصطلحات موضوعية: Human Genome, Genetics, Ovarian Cancer, Clinical Research, Cancer, Rare Diseases, Orphan Drug, Aetiology, 2.1 Biological and endogenous factors, DNA Methylation, Drug Resistance, Neoplasm, Female, Humans, Neoplasm Recurrence, Local, Ovarian Neoplasms, Transcriptome, High grade serous ovarian cancer, Methylation, Chemoresistance, Epigenetics, Whole genome bisulfite sequencing, Computational methods, Translational research, Oncology and Carcinogenesis, Oncology & Carcinogenesis

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/2xx1k4gv

المؤلفون: Silva, Tiago C, Young, Juan I, Martin, Eden R, Chen, X Steven, Wang, Lily

المساهمون: National Institutes of Health, National Institute on Aging, Illinois Department of Public Health, Translational Genomics Research Institute

المصدر: Nucleic Acids Research ; volume 50, issue 9, page e51-e51 ; ISSN 0305-1048 1362-4962

الاتاحة: http://dx.doi.org/10.1093/nar/gkac030
https://academic.oup.com/nar/article-pdf/50/9/e51/43774091/gkac030.pdf

المؤلفون: Jacobsen, Gillian E., Fernández, Irina, Quintero, Maria A., Santander, Ana M., Pignac-Kobinger, Judith, Damas, Oriana M., Deshpande, Amar R., Kerman, David H., Ban, Yuguang, Gao, Zhen, Silva, Tiago C., Wang, Lily, Beecham, Ashley H., McCauley, Jacob L., Burgueño, Juan F., Abreu, Maria T.

المصدر: Gastro Hep Advances ; volume 1, issue 3, page 380-392 ; ISSN 2772-5723

الاتاحة: http://dx.doi.org/10.1016/j.gastha.2022.01.005
https://api.elsevier.com/content/article/PII:S2772572322000127?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2772572322000127?httpAccept=text/plain

المؤلفون: The Cancer Genome Atlas Analysis Network, Corces, M. Ryan, Granja, Jeffrey M., Shams, Shadi, Louie, Bryan H., Seoane, Jose A., Zhou, Wanding, Silva, Tiago C., Groeneveld, Clarice, Wong, Christopher K., Cho, Seung Woo, Satpathy, Ansuman T., Mumbach, Maxwell R., Hoadley, Katherine A., Robertson, A. Gordon, Sheffield, Nathan C., Felau, Ina, Castro, Mauro A. A., Berman, Benjamin P., Staudt, Louis M., Zenklusen, Jean C., Laird, Peter W., Curtis, Christina, Greenleaf, William J., Chang, Howard Y.

المصدر: Science, 2018 Oct . 362(6413), 420-420.

URL الوصول: https://www.jstor.org/stable/26568434

المؤلفون: São Pedro, Mariana N., Silva, Tiago C., Patil, Rohan, Ottens, Marcel

المصدر: Biotechnology and Bioengineering ; volume 118, issue 9, page 3275-3286 ; ISSN 0006-3592 1097-0290

الاتاحة: http://dx.doi.org/10.1002/bit.27757
https://onlinelibrary.wiley.com/doi/pdf/10.1002/bit.27757
https://onlinelibrary.wiley.com/doi/full-xml/10.1002/bit.27757

المؤلفون: Zhang, Lanyu, Young, Juan I., Gomez, Lissette, Silva, Tiago C., Schmidt, Michael A., Cai, Jesse, Chen, Xi, Martin, Eden R., Wang, Lily

المساهمون: National Institute on Aging

المصدر: Acta Neuropathologica Communications ; volume 9, issue 1 ; ISSN 2051-5960

الاتاحة: http://dx.doi.org/10.1186/s40478-021-01177-8
https://link.springer.com/content/pdf/10.1186/s40478-021-01177-8.pdf
https://link.springer.com/article/10.1186/s40478-021-01177-8/fulltext.html

المؤلفون: Zheng, Yueyuan, Huang, Guowei, Silva, Tiago C., Yang, Qian, Jiang, Yan-Yi, Koeffler, H. Phillip, Lin, De-Chen, Berman, Benjamin P.

المساهمون: U.S. Department of Health & Human Services | NIH | National Cancer Institute, Cedars-Sinai Medical Center

المصدر: Nature Communications ; volume 12, issue 1 ; ISSN 2041-1723

الاتاحة: http://dx.doi.org/10.1038/s41467-021-22720-0
https://www.nature.com/articles/s41467-021-22720-0.pdf
https://www.nature.com/articles/s41467-021-22720-0

المؤلفون: Lehmann, Brian D., Colaprico, Antonio, Silva, Tiago C., Chen, Jianjiao, An, Hanbing, Ban, Yuguang, Huang, Hanchen, Wang, Lily, James, Jamaal L., Balko, Justin M., Gonzalez-Ericsson, Paula I., Sanders, Melinda E., Zhang, Bing, Pietenpol, Jennifer A., Chen, X. Steven

المساهمون: U.S. Department of Health & Human Services | NIH | National Cancer Institute, Susan G. Komen, U.S. Department of Defense

المصدر: Nature Communications ; volume 12, issue 1 ; ISSN 2041-1723

الاتاحة: http://dx.doi.org/10.1038/s41467-021-26502-6
https://www.nature.com/articles/s41467-021-26502-6.pdf
https://www.nature.com/articles/s41467-021-26502-6

المؤلفون: Zheng, Yueyuan, Huang, Guowei, Silva, Tiago C., Yang, Qian, Jiang, Yan-Yi, Koeffler, H. Phillip, Lin, De-Chen, Berman, Benjamin P.

المصدر: Nature Communications ; volume 12, issue 1 ; ISSN 2041-1723

الاتاحة: https://doi.org/10.1038/s41467-021-24389-x
https://www.nature.com/articles/s41467-021-24389-x.pdf
https://www.nature.com/articles/s41467-021-24389-x

المؤلفون: Huang, Yongsheng, Yang, Qian, Zheng, Yueyuan, Lin, Lehang, Xu, Xin, Xu, Xiu-E, Silva, Tiago C, Hazawa, Masaharu, Peng, Li, Cao, Haotian, Ding, Yanbing, Lu, Daning, Berman, Benjamin P, Xu, Li-Yan, Li, En-Min, Yin, Dong

المساهمون: Natural Science Foundation of China, Guangdong Science and Technology Department

المصدر: Nucleic Acids Research ; volume 49, issue 16, page 9246-9263 ; ISSN 0305-1048 1362-4962

الاتاحة: https://doi.org/10.1093/nar/gkab679
http://academic.oup.com/nar/article-pdf/49/16/9246/40358599/gkab679.pdf

المؤلفون: Mosella, Maritza S, Sabedot, Thais S, Silva, Tiago C, Malta, Tathiane M, Dezem, Felipe Segato, Asmaro, Karam P, Wells, Michael, Mukherjee, Abir, Poisson, Laila M, Snyder, James, deCarvalho, Ana C, Walbert, Tobias, Aho, Todd, Kalkanis, Steven, Elias, Paula C, Antonini, Sonir R, Rock, Jack, Noushmehr, Houtan, Castro, Margaret, Castro, Ana Valeria

المساهمون: São Paulo Research Foundation, A.V.C. and K.P.A. by Henry Ford Hospital, National Institutes of Health, Department of Defense

المصدر: Neuro-Oncology ; volume 23, issue 8, page 1292-1303 ; ISSN 1522-8517 1523-5866

الاتاحة: https://doi.org/10.1093/neuonc/noab044
http://academic.oup.com/neuro-oncology/advance-article-pdf/doi/10.1093/neuonc/noab044/37929840/noab044.pdf
https://academic.oup.com/neuro-oncology/article-pdf/23/8/1292/39535761/noab044.pdf

المؤلفون: Lu, Min, Sha, Yifan, Silva, Tiago C., Colaprico, Antonio, Sun, Xiaodian, Ban, Yuguang, Wang, Lily, Lehmann, Brian D., Chen, X. Steven

المصدر: Frontiers in Genetics ; volume 12 ; ISSN 1664-8021

الاتاحة: http://dx.doi.org/10.3389/fgene.2021.708835
https://www.frontiersin.org/articles/10.3389/fgene.2021.708835/full

المؤلفون: Odom, Gabriel J., Colaprico, Antonio, Silva, Tiago C., Chen, X. Steven, Wang, Lily

المساهمون: National Institutes of Health

المصدر: Frontiers in Genetics ; volume 12 ; ISSN 1664-8021

الاتاحة: http://dx.doi.org/10.3389/fgene.2021.783713
https://www.frontiersin.org/articles/10.3389/fgene.2021.783713/full

المؤلفون: Colaprico, Antonio, Olsen, Catharina, Bailey, Matthew H., Odom, Gabriel J., Terkelsen, Thilde, Silva, Tiago C., Olsen, André V., Cantini, Laura, Zinovyev, Andrei, Barillot, Emmanuel, Noushmehr, Houtan, Bertoli, Gloria, Castiglioni, Isabella, Cava, Claudia, Bontempi, Gianluca, Chen, Xi Steven, Papaleo, Elena

المصدر: Colaprico , A , Olsen , C , Bailey , M H , Odom , G J , Terkelsen , T , Silva , T C , Olsen , A V , Cantini , L , Zinovyev , A , Barillot , E , Noushmehr , H , Bertoli , G , Castiglioni , I , Cava , C , Bontempi , G , Chen , X S & Papaleo , E 2020 , ' Interpreting pathways to discover cancer driver genes with Moonlight ' , Nature Communications , vol. 11 , 69 . https://doi.org/10.1038/s41467-019-13803-0

وصف الملف: application/pdf

الاتاحة: https://curis.ku.dk/portal/da/publications/interpreting-pathways-to-discover-cancer-driver-genes-with-moonlight(64f2a719-b6ed-4482-b7cf-eb579421c260).html
https://doi.org/10.1038/s41467-019-13803-0
https://curis.ku.dk/ws/files/235774084/Interpreting_pathways_to_discover_cancer_driver_genes_with_Moonlight.pdf

المؤلفون: Zhang, Lanyu, Silva, Tiago C., Young, Juan I., Gomez, Lissette, Schmidt, Michael A., Hamilton-Nelson, Kara L., Kunkle, Brian W., Chen, Xi, Martin, Eden R., Wang, Lily

المساهمون: U.S. Department of Health & Human Services | NIH | National Institute on Aging

المصدر: Nature Communications ; volume 11, issue 1 ; ISSN 2041-1723

الاتاحة: http://dx.doi.org/10.1038/s41467-020-19791-w
https://www.nature.com/articles/s41467-020-19791-w.pdf
https://www.nature.com/articles/s41467-020-19791-w

المؤلفون: Mounir, Mohamed, Lucchetta, Marta, Silva, Tiago C, Olsen, Catharina, Bontempi, Gianluca, Chen, Xi, Noushmehr, Houtan, Colaprico, Antonio, Papaleo, Elena

المصدر: Mounir , M , Lucchetta , M , Silva , T C , Olsen , C , Bontempi , G , Chen , X , Noushmehr , H , Colaprico , A & Papaleo , E 2019 , ' New functionalities in the TCGAbiolinks package for the study and integration of cancer data from GDC and GTEx ' , PLOS Computational Biology , vol. 15 , no. 3 , e1006701 . https://doi.org/10.1371/journal.pcbi.1006701

وصف الملف: application/pdf

الاتاحة: https://researchprofiles.ku.dk/da/publications/new-functionalities-in-the-tcgabiolinks-package-for-the-study-and-integration-of-cancer-data-from-gdc-and-gtex(4d293f29-3dd3-4ad8-82ea-30d225188c5e).html
https://doi.org/10.1371/journal.pcbi.1006701
https://curis.ku.dk/ws/files/229272172/journal.pcbi.1006701.pdf

المؤلفون: Reyes, Alberto Luiz P., Silva, Tiago C., Coetzee, Simon G., Plummer, Jasmine T., Davis, Brian D., Chen, Stephanie, Hazelett, Dennis J., Lawrenson, Kate, Berman, Benjamin P., Gayther, Simon A., Jones, Michelle R.

المساهمون: National Cancer Institute, Cedars-Sinai Medical Center

المصدر: BMC Genomics ; volume 20, issue 1 ; ISSN 1471-2164

الاتاحة: http://dx.doi.org/10.1186/s12864-019-6073-7
http://link.springer.com/content/pdf/10.1186/s12864-019-6073-7.pdf
http://link.springer.com/article/10.1186/s12864-019-6073-7/fulltext.html

المؤلفون: Gao, Galen F., Parker, Joel S., Reynolds, Sheila M., Silva, Tiago C., Wang, Liang-Bo, Zhou, Wanding, Akbani, Rehan, Bailey, Matthew, Balu, Saianand, Berman, Benjamin P., Brooks, Denise, Chen, Hu, Cherniack, Andrew D., Demchok, John A., Ding, Li, Felau, Ina, Gaheen, Sharon, Gerhard, Daniela S., Heiman, David I., Hernandez, Kyle M., Hoadley, Katherine A., Jayasinghe, Reyka, Kemal, Anab, Knijnenburg, Theo A., Laird, Peter W., Mensah, Michael K.A., Mungall, Andrew J., Robertson, A. Gordon, Shen, Hui, Tarnuzzer, Roy, Wang, Zhining, Wyczalkowski, Matthew, Yang, Liming, Zenklusen, Jean C., Zhang, Zhenyu, Liang, Han, Noble, Michael S.

المساهمون: National Cancer Institute

المصدر: Cell Systems ; volume 9, issue 1, page 24-34.e10 ; ISSN 2405-4712

الاتاحة: http://dx.doi.org/10.1016/j.cels.2019.06.006
https://api.elsevier.com/content/article/PII:S2405471219302017?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2405471219302017?httpAccept=text/plain

المؤلفون: Silva, Tiago C, Coetzee, Simon G, Gull, Nicole, Yao, Lijing, Hazelett, Dennis J, Noushmehr, Houtan, Lin, De-Chen, Berman, Benjamin P

المساهمون: Stegle, Oliver, Cedars-Sinai’s Samuel Oschin Comprehensive Cancer Institute, São Paulo Research Foundation, NIH/NCI Informatics Technology for Cancer Research, Genomic Data Analysis Network, NIH

المصدر: Bioinformatics ; volume 35, issue 11, page 1974-1977 ; ISSN 1367-4803 1367-4811

الاتاحة: https://doi.org/10.1093/bioinformatics/bty902
https://academic.oup.com/bioinformatics/article-pdf/35/11/1974/48935056/bioinformatics_35_11_1974.pdf

المؤلفون: Malta, Tathiane M, de Souza, Camila F, Sabedot, Thais S, Silva, Tiago C, Mosella, Maritza S, Kalkanis, Steven N, Snyder, James, Castro, Ana Valeria B, Noushmehr, Houtan

المساهمون: Grant Henry Ford Hospital, Sao Paulo Research Foundation, Coordination of Improvement of Higher Education Personnel, Brazilian National Council for Scientific and Technological Development

المصدر: Neuro-Oncology ; volume 20, issue 5, page 608-620 ; ISSN 1522-8517 1523-5866

الاتاحة: https://doi.org/10.1093/neuonc/nox183
http://academic.oup.com/neuro-oncology/article-pdf/20/5/608/24576996/nox183.pdf