المؤلفون: Quentin Bertrand, Przemyslaw Nogly, Eriko Nango, Demet Kekilli, Georgii Khusainov, Antonia Furrer, Daniel James, Florian Dworkowski, Petr Skopintsev, Sandra Mous, Isabelle Martiel, Per Börjesson, Giorgia Ortolani, Chia-Ying Huang, Michal Kepa, Dmitry Ozerov, Steffen Brünle, Valerie Panneels, Tomoyuki Tanaka, Rie Tanaka, Kensuke Tono, Shigeki Owada, Philip J. M. Johnson, Karol Nass, Gregor Knopp, Claudio Cirelli, Christopher Milne, Gebhard Schertler, So Iwata, Richard Neutze, Tobias Weinert, Jörg Standfuss

المصدر: Nature Communications, Vol 15, Iss 1, Pp 1-11 (2024)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/3c025d7fb07142aba6ad9ce725228605

المؤلفون: Guillaume Gotthard, Sandra Mous, Tobias Weinert, Raiza Nara Antonelli Maia, Daniel James, Florian Dworkowski, Dardan Gashi, Antonia Furrer, Dmitry Ozerov, Ezequiel Panepucci, Meitian Wang, Gebhard F. X. Schertler, Joachim Heberle, Joerg Standfuss, Przemyslaw Nogly

المصدر: IUCrJ, Vol 11, Iss 5, Pp 792-808 (2024)

مصطلحات موضوعية: time-resolved serial synchrotron crystallography, tr-ssx, room-temperature crystallography, blue-light photoreceptors, chlamydomonas reinhardtii, crphotlov1, structural dynamics, light–oxygen–voltage domains, Crystallography, QD901-999

وصف الملف: electronic resource

Relation: https://journals.iucr.org/paper?S2052252524005608; https://doaj.org/toc/2052-2525

URL الوصول: https://doaj.org/article/0487f96a71db49698c8ff3e32bc949bf

المؤلفون: Ben A Bailey-Elkin, Robert C M Knaap, Anuradha De Silva, Ilse M Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L Mark

المصدر: PLoS Pathogens, Vol 19, Iss 12, p e1011872 (2023)

مصطلحات موضوعية: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1553-7366; https://doaj.org/toc/1553-7374

URL الوصول: https://doaj.org/article/295d5f2bdd0640f59f8fca11b2652ab5

المؤلفون: Thomas Gruhl, Tobias Weinert, Matthew Rodrigues, Christopher J Milne, Giorgia Ortolani, Karol Nass, Eriko Nango, Saumik Sen, Philip J M Johnson, Claudio Cirelli, Antonia Furrer, Sandra Mous, Petr Skopintsev, Daniel James, Florian Dworkowski, Petra Båth, Demet Kekilli, Dmitry Ozerov, Rie Tanaka, Hannah Glover, Camila Bacellar, Steffen Brünle, Cecilia M Casadei, Azeglio D Diethelm, Dardan Gashi, Guillaume Gotthard, Ramon Guixà-González, Yasumasa Joti, Victoria Kabanova, Gregor Knopp, Elena Lesca, Pikyee Ma, Isabelle Martiel, Jonas Mühle, Shigeki Owada, Filip Pamula, Daniel Sarabi, Oliver Tejero, Ching-Ju Tsai, Niranjan Varma, Anna Wach, Sébastien Boutet, Kensuke Tono, Przemyslaw Nogly, Xavier Deupi, So Iwata, Richard Neutze, Jörg Standfuss, Gebhard FX Schertler, Valerie Panneels

مصطلحات موضوعية: basis-sets, Multidisciplinary, software, energy-storage, dynamics, Photobiology, isomerization, rhodopsin, excited-state, retinal chromophore, counterion displacement, Visual system, crystallography, X-ray crystallography

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5a6e4e1e23892118ac11c72f2ba04337
https://ruj.uj.edu.pl/xmlui/handle/item/312907

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/PLP2_active_site_movement_upon_Ub_binding_/24811742

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g004
https://figshare.com/articles/figure/PLP2_active_site_movement_upon_Ub_binding_/24811742

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Alignment_of_PRRSV_SD01-08_accession_and_DV_PLP2_domains_sequences_retrieved_from_GenBank_accession_numbers_DQ489311_1_and_MW674755_1_respectively_/24811727

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.s003
https://figshare.com/articles/figure/Alignment_of_PRRSV_SD01-08_accession_and_DV_PLP2_domains_sequences_retrieved_from_GenBank_accession_numbers_DQ489311_1_and_MW674755_1_respectively_/24811727

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Structural_detail_surrounding_the_active_site_of_the_Ub-bound_PLP2_domain_/24811730

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.s004
https://figshare.com/articles/figure/Structural_detail_surrounding_the_active_site_of_the_Ub-bound_PLP2_domain_/24811730

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/B-factor_putty_representation_of_the_A_PLP2_and_B_PLP2-Ub_complex_/24811724

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.s002
https://figshare.com/articles/figure/B-factor_putty_representation_of_the_A_PLP2_and_B_PLP2-Ub_complex_/24811724

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Multiple_sequence_alignment_of_arterivirus_PLP2_domains_/24811721

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.s001
https://figshare.com/articles/figure/Multiple_sequence_alignment_of_arterivirus_PLP2_domains_/24811721

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Crystal_structure_of_the_PLP2-Ub_complex_/24811736

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g002
https://figshare.com/articles/figure/Crystal_structure_of_the_PLP2-Ub_complex_/24811736

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Inhibition_of_IFN-_promoter_activity_by_rationally_designed_PLP2_mutants_/24811751

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g007
https://figshare.com/articles/figure/Inhibition_of_IFN-_promoter_activity_by_rationally_designed_PLP2_mutants_/24811751

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Crystal_structure_of_the_PRRSV_SD01-08_PLP2_domain_/24811733

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g001
https://figshare.com/articles/figure/Crystal_structure_of_the_PRRSV_SD01-08_PLP2_domain_/24811733

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Comparison_of_the_PRRSV_and_EAV_PLP2_4IUM_domains_bound_to_Ub_/24811739

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g003
https://figshare.com/articles/figure/Comparison_of_the_PRRSV_and_EAV_PLP2_4IUM_domains_bound_to_Ub_/24811739

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/In_trans_nsp2C_3_protease_activity_of_PLP2_mutants_in_vitro_/24811745

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g005
https://figshare.com/articles/figure/In_trans_nsp2C_3_protease_activity_of_PLP2_mutants_in_vitro_/24811745

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Global_DUB_activity_of_PLP2_mutants_in_vitro_/24811748

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g006
https://figshare.com/articles/figure/Global_DUB_activity_of_PLP2_mutants_in_vitro_/24811748

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/dataset/X-ray_data_collection_and_refinement_statistics_/24811766

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.t001
https://figshare.com/articles/dataset/X-ray_data_collection_and_refinement_statistics_/24811766

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Michaelis-Menten_plot_of_wt_PRRSV_DV_sub_385_578_sub_PLP2_/24811754

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g008
https://figshare.com/articles/figure/Michaelis-Menten_plot_of_wt_PRRSV_DV_sub_385_578_sub_PLP2_/24811754

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Immunofluorescence_analysis_of_BHK-21_cells_transfected_with_PRRSV_DV_/24811757

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g009
https://figshare.com/articles/figure/Immunofluorescence_analysis_of_BHK-21_cells_transfected_with_PRRSV_DV_/24811757

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/figure/Plaque_assay_of_BHK-21_harvest_on_MARC-145_cells_/24811760

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.g010
https://figshare.com/articles/figure/Plaque_assay_of_BHK-21_harvest_on_MARC-145_cells_/24811760

المؤلفون: Ben A. Bailey-Elkin, Robert C. M. Knaap, Anuradha De Silva, Ilse M. Boekhoud, Sandra Mous, Niek van Vught, Mazdak Khajehpour, Erwin van den Born, Marjolein Kikkert, Brian L. Mark

مصطلحات موضوعية: Biochemistry, Microbiology, Cell Biology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Cancer, Science Policy, Mental Health, Infectious Diseases, Plant Biology, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, +deubiquitination%22">xlink "> deubiquitination, three different versions, polyprotein processing activities, like protease 2, host immune evasion, cellular interferon production, respiratory syndrome virus, equine arteritis virus, distantly related virus, viral domain could, viral domain compared, first crystal structure, plp2 dub activity, prrsv plp2 domain, viral replication

Relation: https://figshare.com/articles/dataset/Michaelis-Menten_kinetics_parameters_of_PRRSV_DV_sub_385-578_sub_and_mutants_of_PRRSV_DV_sub_385-578_sub_for_Ub-AMC_substrate_/24811769

الاتاحة: https://doi.org/10.1371/journal.ppat.1011872.t002
https://figshare.com/articles/dataset/Michaelis-Menten_kinetics_parameters_of_PRRSV_DV_sub_385-578_sub_and_mutants_of_PRRSV_DV_sub_385-578_sub_for_Ub-AMC_substrate_/24811769