المؤلفون: Taha Chouati, Ounayssa Ayadi, Mohammed Ajdig, Lahcen Ouchari, Bahia Rached, Jamila El Alami, Elmostafa EL Fahime

المصدر: Novel Research in Microbiology Journal, Vol 7, Iss 6, Pp 2199-2209 (2023)

مصطلحات موضوعية: alkaline protease, bacillus licheniformis, extremo-tolerance, multilocus sequence typing scheme, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://nrmj.journals.ekb.eg/article_325660_fc51aa36b3a6e41a77508aa10d207fa6.pdf; https://doaj.org/toc/2537-0286; https://doaj.org/toc/2537-0294

URL الوصول: https://doaj.org/article/fb1f8759e70842dc9edf5d097edc35b7

المؤلفون: Gröschel, Matthias I, Meehan, Conor J, Barilar, Ivan, Diricks, Margo, Gonzaga, Aitor, Steglich, Matthias, Conchillo-Solé, Oscar, Scherer, Isabell-Christin, Mamat, Uwe, Luz, Christian F, De Bruyne, Katrien, Utpatel, Christian, Yero, Daniel, Gibert, Isidre, Daura, Xavier, Kampmeier, Stefanie, Rahman, Nurdyana Abdul, Kresken, Michael, van der Werf, Tjip S, Alio, Ifey, Streit, Wolfgang R, Zhou, Kai, Schwartz, Thomas, Rossen, John W A, Farhat, Maha R, Schaible, Ulrich E, Nübel, Ulrich, Rupp, Jan, Steinmann, Joerg, Niemann, Stefan, Kohl, Thomas A

المصدر: Gröschel , M I , Meehan , C J , Barilar , I , Diricks , M , Gonzaga , A , Steglich , M , Conchillo-Solé , O , Scherer , I-C , Mamat , U , Luz , C F , De Bruyne , K , Utpatel , C , Yero , D , Gibert , I , Daura , X , Kampmeier , S , Rahman , N A , Kresken , M , van der Werf , T S , Alio , I , Streit , W R , Zhou , K , Schwartz , ....

مصطلحات موضوعية: SEQUENCE TYPING SCHEME, INFECTIONS, ANNOTATION, DISEASE, PROTEIN, TREE, TOOL

وصف الملف: application/pdf

الاتاحة: https://hdl.handle.net/11370/357ca712-c097-4f26-a750-9e48fd7c15fa
https://research.rug.nl/en/publications/357ca712-c097-4f26-a750-9e48fd7c15fa
https://doi.org/10.1038/s41467-020-15123-0
https://pure.rug.nl/ws/files/123827974/The_phylogenetic_landscape_and_nosocomial_spread_of_the_multidrug_resistant_opportunist_Stenotrophomonas_maltophilia.pdf

المؤلفون: Lees, John A., Harris, Simon R., Tonkin-Hill, Gerry, Gladstone, Rebecca A., Lo, Stephanie W., Weiser, Jeffrey N., Corander, Jukka, Bentley, Stephen D., Croucher, Nicholas J.

المساهمون: Helsinki Institute for Information Technology, Jukka Corander / Principal Investigator, Department of Mathematics and Statistics, Biostatistics Helsinki

مصطلحات موضوعية: SEQUENCE TYPING SCHEME, POPULATION-STRUCTURE, ESCHERICHIA-COLI, DNA, DIVERSITY, EVOLUTION, RESISTANCE, ALGORITHM, VIRULENCE, SELECTION, Biochemistry, cell and molecular biology, Mathematics

وصف الملف: application/pdf

Relation: We thank Nabil-Fareed Alikhan for helpful discussions about the Salmonella enterica data set, and Leon Bentley for early experiments with changing Mash k-mer and sketch sizes. We also thank Joao Carrico and Mickael Silva for providing the curated cgMLST schemes. J.A.L. and J.N.W. are supported by grants from the United States Public Health Service (AI038446 and AI105168). S.R.H., G.T.-H., and S.D.B. are supported by Wellcome grant 098051. S.W.L. and R.A.G. are supported by the Bill and Melinda Gates Foundation. J.C. is supported by the European Research Council (grant no. 742158). N.J.C. is supported by a Sir Henry Dale Fellowship, jointly funded by Wellcome and the Royal Society (grant no. 104169/Z/14/Z).; Lees , J A , Harris , S R , Tonkin-Hill , G , Gladstone , R A , Lo , S W , Weiser , J N , Corander , J , Bentley , S D & Croucher , N J 2019 , ' Fast and flexible bacterial genomic epidemiology with PopPUNK ' , Genome Research , vol. 29 , no. 2 , pp. 304-316 . https://doi.org/10.1101/gr.241455.118; http://hdl.handle.net/10138/299114; f9774e34-1672-4c7d-b3de-ae01fc93cd4b; 85060934289; 000457462100013

الاتاحة: http://hdl.handle.net/10138/299114

المؤلفون: Zhou, X., Chlebowicz, M. A., Bathoorn, E., Rosema, S., Couto, N., Lokate, M., Arends, J. P., Friedrich, A. W., Rossen, J. W. A.

المصدر: Zhou , X , Chlebowicz , M A , Bathoorn , E , Rosema , S , Couto , N , Lokate , M , Arends , J P , Friedrich , A W & Rossen , J W A 2018 , ' Elucidating vancomycin-resistant Enterococcus faecium outbreaks : the role of clonal spread and movement of mobile genetic elements ' , Journal of Antimicrobial Chemotherapy , vol. 73 , no. 12 , pp. 3259-3267 . https://doi.org/10.1093/jac/dky349

مصطلحات موضوعية: SEQUENCE TYPING SCHEME, VANA, EPIDEMIOLOGY, DISSEMINATION, ARTEMIS

وصف الملف: application/pdf

الاتاحة: https://hdl.handle.net/11370/e04b83b4-95d1-427d-bed2-884f8055425f
https://research.rug.nl/en/publications/e04b83b4-95d1-427d-bed2-884f8055425f
https://doi.org/10.1093/jac/dky349
https://pure.rug.nl/ws/files/65000709/dky349.pdf

المؤلفون: Lees, JA, Harris, SR, Tonkin-Hill, G, Gladstone, RA, Lo, SW, Weiser, JN, Corander, J, Bentley, SD, Croucher, NJ

المساهمون: Medical Research Council (MRC), Biotechnology and Biological Sciences Research Cou

المصدر: 316 ; 304

مصطلحات موضوعية: Science & Technology, Life Sciences & Biomedicine, Biochemistry & Molecular Biology, Biotechnology & Applied Microbiology, Genetics & Heredity, SEQUENCE TYPING SCHEME, POPULATION-STRUCTURE, ESCHERICHIA-COLI, DNA, DIVERSITY, EVOLUTION, RESISTANCE, ALGORITHM, VIRULENCE, SELECTION, 06 Biological Sciences, 11 Medical And Health Sciences, Bioinformatics

جغرافية الموضوع: United States

Relation: Genome Research; http://hdl.handle.net/10044/1/67448; https://dx.doi.org/10.1101/gr.241455.118; MR/K010174/1B; RM33G0360

الاتاحة: http://hdl.handle.net/10044/1/67448
https://doi.org/10.1101/gr.241455.118

المؤلفون: Patricia Ruiz-Garbajosa, Marc J. M. Bonten, Ángel Asensio, Teresa M. Coque, Fernando Baquero, Rafael Cantón, Rob J. L. Willems, Rosa del Campo

المساهمون: University of Groningen

المصدر: Journal of Clinical Microbiology, 47(2), 345-351. AMER SOC MICROBIOLOGY

مصطلحات موضوعية: Microbiology (medical), Adult, DNA, Bacterial, Male, Genotype, IMPACT, Enterococcus faecium, TRANSMISSION DYNAMICS, Biology, Enterococcus faecalis, Persistence (computer science), Microbiology, VANCOMYCIN-RESISTANT ENTEROCOCCI, COLONIZATION, Amp resistance, INFECTION, Cluster Analysis, Humans, Colonization, SEQUENCE TYPING SCHEME, AGENTS, ESP, Gram-Positive Bacterial Infections, Aged, Aged, 80 and over, RISK, Rectum, Bacteriology, Sequence Analysis, DNA, Middle Aged, Streptococcaceae, biology.organism_classification, DNA Fingerprinting, Bacterial Typing Techniques, Electrophoresis, Gel, Pulsed-Field, Gastrointestinal Tract, Intensive Care Units, Spain, Carrier State, Multilocus sequence typing, Female, COMPLEXES, Ampicillin Resistance

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4b6787dbf1eb6b2634104ef97b650e2d
https://doi.org/10.1128/jcm.01597-08

المؤلفون: Yang, Jing-xian, Li, Tong, Ning, Yong-zhong, Shao, Dong-hua, Liu, Jing, Wang, Shu-qin, Liang, Guo-wei

المساهمون: Liang, GW (reprint author), Aerosp Ctr Hosp, Dept Clin Lab, 15 Yuquan Rd, Beijing 100049, Peoples R China., Aerosp Ctr Hosp, Dept Clin Lab, Beijing 100049, Peoples R China., Peking Univ, Hlth Sci Ctr, Dept Microbiol, Beijing 100871, Peoples R China., Peking Univ, Hosp 3, Dept Clin Lab, Beijing 100871, Peoples R China., Aerosp Ctr Hosp, Dept Clin Lab, 15 Yuquan Rd, Beijing 100049, Peoples R China.

المصدر: PubMed ; SCI

مصطلحات موضوعية: Vancomycin-resistant enterococcus, Virulence, Multilocus sequence typing, SEQUENCE TYPING SCHEME, GLYCOPEPTIDE RESISTANCE, MULTIPLEX PCR, SPECIES LEVEL, IDENTIFICATION, EPIDEMIOLOGY, COMPLEX, SPREAD, PREVALENCE, BACTEREMIA

Relation: INFECTION GENETICS AND EVOLUTION.2015,33,253-260.; 1300329; http://hdl.handle.net/20.500.11897/418842; WOS:000357438300035

الاتاحة: https://hdl.handle.net/20.500.11897/418842
https://doi.org/10.1016/j.meegid.2015.05.012

المؤلفون: Prieto, Ana M. Guzman, van Schaik, Willem, Rogers, Malbert R. C., Coque, Teresa M., Baquero, Fernando, Corander, Jukka, Willems, Rob J. L.

المساهمون: Department of Mathematics and Statistics, Jukka Corander / Principal Investigator, Biostatistics Helsinki

مصطلحات موضوعية: faecium, faecalis, high-risk nosocomial clones, antibiotic resistance, virulence, VANCOMYCIN-RESISTANT ENTEROCOCCI, SEQUENCE TYPING SCHEME, PLASMID-MEDIATED RESISTANCE, URINARY-TRACT-INFECTION, SURFACE PROTEIN ESP, IN-VITRO ACTIVITY, GLYCOPEPTIDE RESISTANCE, ANTIBIOTIC-RESISTANCE, FAECIUM STRAINS, GENE-CLUSTER, Statistics and probability, Genetics, developmental biology, physiology

وصف الملف: application/pdf

Relation: WS is funded through a NWO-Vidi grant (917.13.357). TC and Hi are supported by grants PI12-01581 and PI15-01307 from the ISCIII-Ministry of Economy and Competitiveness of Spain (to TC), S2010/BMD2414 from the Regional Government of Madrid (to Hi) and the CIBERESP Network for Biomedical Research in Epidemiology and Public Health (Institute Carlos III, Spanish Ministry of Science and Innovation, reference number CB06/02/0053).; Prieto , A M G , van Schaik , W , Rogers , M R C , Coque , T M , Baquero , F , Corander , J & Willems , R J L 2016 , ' Global Emergence and Dissemination of Enterococci as Nosocomial Pathogens : Attack of the Clones? ' , Frontiers in Microbiology , vol. 7 , 788 . https://doi.org/10.3389/fmicb.2016.00788; http://hdl.handle.net/10138/164315; e5b1144a-8b9a-43a6-87e2-ddb6f916041a; 84973443007; 000376485600001

الاتاحة: http://hdl.handle.net/10138/164315

المؤلفون: Jimenez, Esther, Ladero, Victor, Chico, Irene, Maldonado-Barragan, Antonio, Lopez, Maria, Martin, Virginia, Fernandez, Leonides, Fernandez, Maria, Alvarez, Miguel A., Torres, Carmen, Rodriguez, Juan M.

المصدر: Jimenez , E , Ladero , V , Chico , I , Maldonado-Barragan , A , Lopez , M , Martin , V , Fernandez , L , Fernandez , M , Alvarez , M A , Torres , C & Rodriguez , J M 2013 , ' Antibiotic resistance, virulence determinants and production of biogenic amines among enterococci from ovine, feline, canine, porcine and human milk ' , BMC Microbiology , vol. 13 , 288 . https://doi.org/10.1186/1471-2180-13-288

مصطلحات موضوعية: Enterococcus, Milk, Mammals, Virulence, Antibiotic resistance, Biogenic amines, LACTIC-ACID BACTERIA, SEQUENCE TYPING SCHEME, HUMAN HEALTH, GLYCOPEPTIDE RESISTANCE, SPECIES-LEVEL, BREAST-MILK, EWES MILK, FAECIUM, ANIMALS, IDENTIFICATION

الاتاحة: https://risweb.st-andrews.ac.uk/portal/en/researchoutput/antibiotic-resistance-virulence-determinants-and-production-of-biogenic-amines-among-enterococci-from-ovine-feline-canine-porcine-and-human-milk(ce81675a-82fe-42cd-85c4-04976bb14361).html
https://doi.org/10.1186/1471-2180-13-288

المؤلفون: Huang, Lei, Sun, Liying, Yan, Yan

المساهمون: Huang, L (reprint author), Peking Univ, Dept Clin Lab, Hosp 1, Beijing 100034, Peoples R China., Peking Univ, Dept Clin Lab, Hosp 1, Beijing 100034, Peoples R China.

المصدر: PubMed ; SCI

مصطلحات موضوعية: Acinetobacter baumannii, carbapenem resistance, Multilocus Sequence Typing (MLST), clonal spread, FIELD GEL-ELECTROPHORESIS, SEQUENCE TYPING SCHEME, MOLECULAR EPIDEMIOLOGY, BETA-LACTAMASE, EFFLUX PUMP, STRAIN

Relation: JOURNAL OF MICROBIOLOGY.2013,51,(1),113-117.; 657252; http://hdl.handle.net/20.500.11897/160072; WOS:000315581700015

الاتاحة: https://hdl.handle.net/20.500.11897/160072
https://doi.org/10.1007/s12275-013-2341-4