المؤلفون: Hongzhong Lu, Feiran Li, Le Yuan, Iván Domenzain, Rosemary Yu, Hao Wang, Gang Li, Yu Chen, Boyang Ji, Eduard J Kerkhoven, Jens Nielsen

المصدر: Molecular Systems Biology, Vol 17, Iss 10, Pp 1-23 (2021)

مصطلحات موضوعية: genome analysis, genome‐scale metabolic models, metabolic innovation, systems biology, Biology (General), QH301-705.5, Medicine (General), R5-920

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1744-4292

URL الوصول: https://doaj.org/article/1b0b1695d181441c8971f35c8d7fd4cc

المؤلفون: Tyler W. Doughty, Rosemary Yu, Lucy Fang-I Chao, Zhongjun Qin, Verena Siewers, Jens Nielsen

المصدر: BMC Genomics, Vol 22, Iss 1, Pp 1-12 (2021)

مصطلحات موضوعية: Biotechnology, TP248.13-248.65, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2164

URL الوصول: https://doaj.org/article/c0491e43106544c1bf86fdcb0a7ff653

المؤلفون: Rosemary Yu, Kate Campbell, Rui Pereira, Johan Björkeroth, Qi Qi, Egor Vorontsov, Carina Sihlbom, Jens Nielsen

المصدر: Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/cd3a69a8906f49269fe304624c14ac0c

المؤلفون: Joseph Longo, Peter J. Mullen, Rosemary Yu, Jenna E. van Leeuwen, Mehdi Masoomian, Dixon T.S. Woon, Yuzhuo Wang, Eric X. Chen, Robert J. Hamilton, Joan M. Sweet, Theodorus H. van der Kwast, Neil E. Fleshner, Linda Z. Penn

المصدر: Molecular Metabolism, Vol 25, Iss , Pp 119-130 (2019)

مصطلحات موضوعية: Internal medicine, RC31-1245

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2212877819300882; https://doaj.org/toc/2212-8778

URL الوصول: https://doaj.org/article/f03d8eaff63e4e4990bc23cc62eb3734

المؤلفون: Rosemary Yu, Egor Vorontsov, Carina Sihlbom, Jens Nielsen

المصدر: eLife, Vol 10 (2021)

مصطلحات موضوعية: gene expression, growth rate, nitrogen metabolism, central carbon metabolism, amino acid metabolism, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/65722; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/37014153e3aa4a6f92926d9970109c38

المؤلفون: Qi Qi, Feiran Li, Rosemary Yu, Martin K. M. Engqvist, Verena Siewers, Johannes Fuchs, Jens Nielsen

المصدر: mBio, Vol 11, Iss 6 (2020)

مصطلحات موضوعية: protein secretory pathway, protein folding precision, multi-omics analysis, protein production, constraint-based modeling, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/ef879989345f40879de143a94eb6b15d

المؤلفون: Tyler W. Doughty (3147543), Rosemary Yu (11469382), Lucy Fang-I Chao (3841342), Zhongjun Qin (1581652), Verena Siewers (107753), Jens Nielsen (11469385)

مصطلحات موضوعية: Genetics, sole carbon source, single large chromosome, silence gene expression, recent work described, longer lag phase, increased doubling time, fermentable carbon sources, poorly induced genes, diminished biomass accumulation, 107 subtelomeric orfs, single chromosome strain, sirtuin family deacetylases, ethanol growth could, subtelomeric dna, genes involved, diminished growth, strain resulted, reference strain, would otherwise, stepwise break, repair method, nuclear dna, model yeast, linear chromosomes, likely cause, heterochromatic regions, facilitate organization, ethanol metabolism, ethanol compared

Relation: https://figshare.com/articles/journal_contribution/Additional_file_1_of_A_single_chromosome_strain_of_S_cerevisiae_exhibits_diminished_ethanol_metabolism_and_tolerance/16664476

الاتاحة: https://doi.org/10.6084/m9.figshare.16664476.v1

المؤلفون: Linda Z. Penn, Benjamin Haibe-Kains, Wail Ba-Alawi, Peter J. Mullen, Jenna E. van Leeuwen, Joseph Longo, Rosemary Yu

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4c71cb2af12e29c1ec632c660bc8aeba
https://doi.org/10.1158/0008-5472.22410461.v1

المؤلفون: Linda Z. Penn, Aaron D. Schimmer, Mark D. Minden, Karl S. Lang, Suzanne Trudel, Zhihua Li, Janice T. Pong, Rosemary Yu, Manpreet Kalkat, Peter J. Mullen, Aleksandra Pandyra

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b8063fe91b262ad8c6b9084041f59679
https://doi.org/10.1158/0008-5472.22403042

المؤلفون: David W. Cescon, Cunjie Zhang, Linda Z. Penn, Rosemary Yu, Emily Branchard, James W. Dennis, Richard R. Drake, Mohamad Elbaz, Joseph Longo, Jenna E. van Leeuwen

المصدر: Cancer Research. 81:2625-2635

مصطلحات موضوعية: 0301 basic medicine, Cancer Research, business.industry, Cancer, Golgi apparatus, medicine.disease, Metastatic breast cancer, Metastasis, carbohydrates (lipids), 03 medical and health sciences, symbols.namesake, 030104 developmental biology, 0302 clinical medicine, Breast cancer, Oncology, 030220 oncology & carcinogenesis, Cancer research, medicine, symbols, Adjuvant therapy, Mevalonate pathway, business, Fluvastatin, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::c2a5be89d9b12ec44a94bb49e5d00bde
https://doi.org/10.1158/0008-5472.can-20-2642

المؤلفون: Rosemary Yu, Jens Nielsen

المصدر: Yu, R & Nielsen, J 2020, ' Yeast systems biology in understanding principles of physiology underlying complex human diseases ', Current Opinion in Biotechnology, vol. 63, pp. 63-69 . https://doi.org/10.1016/j.copbio.2019.11.021

مصطلحات موضوعية: 0106 biological sciences, Cell physiology, 0303 health sciences, Experimental control, ved/biology, Systems Biology, Systems biology, ved/biology.organism_classification_rank.species, Biomedical Engineering, High resolution, Bioengineering, Saccharomyces cerevisiae, Cell growth rate, Computational biology, Biology, 01 natural sciences, Yeast, 03 medical and health sciences, SDG 3 - Good Health and Well-being, 010608 biotechnology, Humans, Model organism, 030304 developmental biology, Biotechnology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::90c9437927b1d50fdfb7c8fabacbabbd
https://doi.org/10.1016/j.copbio.2019.11.021

المؤلفون: Rosemary Yu, Egor Vorontsov, Carina Sihlbom, Jens Nielsen

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::d8449eac0fdb1ee0ee3056f87a1a08b3
https://doi.org/10.1101/2021.12.15.472747

المؤلفون: Hao Wang, Rosemary Yu, Jens Nielsen

مصطلحات موضوعية: chemistry.chemical_classification, chemistry, Biochemistry, Nucleotide, Context (language use), Lipid metabolism, Metabolism, Biology, Flux (metabolism), Food web, Amino acid, Trophic level

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::dd4035fe9ee3930501ec91cf859674f6
https://doi.org/10.1101/2021.07.01.450789

المؤلفون: Tyler W Doughty, Rosemary Yu, Lucy Fang-I Chao, Zhongjun Qin, Verena Siewers, Jens Nielsen

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::6b7b5bbf3713ecee48249ba637655cd8
https://doi.org/10.21203/rs.3.rs-458332/v1

المؤلفون: Egor Vorontsov, Carina Sihlbom, Rosemary Yu, Jens Nielsen

مصطلحات موضوعية: Biochemistry, Gene expression, Biology, Central carbon metabolism, Gene, Yeast

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::0d2f43b1916b189c2cad382d688bba34
https://doi.org/10.7554/elife.65722.sa2

المؤلفون: Carl Malina, Rosemary Yu, Johan Björkeroth, Eduard J. Kerkhoven, Jens Nielsen

المصدر: Malina, C, Yu, R, Bjorkeroth, J, Kerkhoven, E J & Nielsen, J 2021, ' Adaptations in metabolism and protein translation give rise to the Crabtree effect in yeast ', Proceedings of the National Academy of Sciences of the United States of America, vol. 118, no. 51, e2112836118 . https://doi.org/10.1073/pnas.2112836118
Proceedings of the National Academy of Sciences of the United States of America

مصطلحات موضوعية: Proteomics, Dystems biology, Multidisciplinary, Constraint-based modeling, Proteome, Systems Biology, Biological Sciences, yeast, Mitochondrial Proton-Translocating ATPases, Aerobiosis, Yeast, Fungal Proteins, proteomics, Glucose, Species Specificity, constraint-based modeling, Gene Expression Regulation, Fungal, Yeasts, Fermentation, Crabtree effect

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::687792d03b30a75adcdab6605e17cb07
https://orbit.dtu.dk/en/publications/60146c8d-be0d-4f08-bab0-fd4cc21686cb

المؤلفون: Jens Nielsen, Sergo Kasvandik, Aleksej Zelezniak, Kate Campbell, Benjamin Sanchez, Petri-Jaan Lahtvee, Iván Domenzain, Rosemary Yu

المصدر: Sánchez, B J, Lahtvee, P J, Campbell, K, Kasvandik, S, Yu, R, Domenzain, I, Zelezniak, A & Nielsen, J 2021, ' Benchmarking accuracy and precision of intensity-based absolute quantification of protein abundances in Saccharomyces cerevisiae ', Proteomics, vol. 21, no. 6, 2000093 . https://doi.org/10.1002/pmic.202000093
PROTEOMICS

مصطلحات موضوعية: Normalization (statistics), Proteomics, Accuracy and precision, Proteome, Saccharomyces cerevisiae, Quantitative proteomics, Mass spectrometry, Batch effect, Biochemistry, 03 medical and health sciences, UPS2, Molecular Biology, 030304 developmental biology, Mathematics, 0303 health sciences, Reproducibility, biology, Absolute proteomics, 030302 biochemistry & molecular biology, Reproducibility of Results, Benchmarking, biology.organism_classification, iBAQ, Data quality, Biological system

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::68899b90343adbe344c5a04fa5b0807c
https://pubmed.ncbi.nlm.nih.gov/34357672

المؤلفون: Rosemary, Yu, Joseph, Longo, Jenna E, van Leeuwen, Cunjie, Zhang, Emily, Branchard, Mohamad, Elbaz, David W, Cescon, Richard R, Drake, James W, Dennis, Linda Z, Penn

المصدر: Cancer research. 81(10)

مصطلحات موضوعية: Epithelial-Mesenchymal Transition, Glycosylation, Lung Neoplasms, Mevalonic Acid, Apoptosis, Breast Neoplasms, Mice, SCID, Endoplasmic Reticulum, Prognosis, Xenograft Model Antitumor Assays, Gene Expression Regulation, Neoplastic, Mice, Adjuvants, Immunologic, Tumor Cells, Cultured, Animals, Humans, Female, Fluvastatin, Cell Proliferation, Signal Transduction

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::805c138ef29094869897329a5c14e487
https://pubmed.ncbi.nlm.nih.gov/33602786

المؤلفون: Tyler W. Doughty (3147543), Rosemary Yu (11469382), Lucy Fang-I Chao (3841342), Zhongjun Qin (1581652), Verena Siewers (107753), Jens Nielsen (11469385)

مصطلحات موضوعية: Genetics, sole carbon source, single large chromosome, silence gene expression, recent work described, longer lag phase, increased doubling time, fermentable carbon sources, poorly induced genes, diminished biomass accumulation, 107 subtelomeric orfs, single chromosome strain, sirtuin family deacetylases, ethanol growth could, subtelomeric dna, genes involved, diminished growth, strain resulted, reference strain, would otherwise, stepwise break, repair method, nuclear dna, model yeast, linear chromosomes, likely cause, heterochromatic regions, facilitate organization, ethanol metabolism, ethanol compared

Relation: https://figshare.com/articles/dataset/Additional_file_2_of_A_single_chromosome_strain_of_S_cerevisiae_exhibits_diminished_ethanol_metabolism_and_tolerance/16664479

الاتاحة: https://doi.org/10.6084/m9.figshare.16664479.v1

المؤلفون: Tyler W. Doughty (3147543), Rosemary Yu (11469382), Lucy Fang-I Chao (3841342), Zhongjun Qin (1581652), Verena Siewers (107753), Jens Nielsen (11469385)

مصطلحات موضوعية: Genetics, sole carbon source, single large chromosome, silence gene expression, recent work described, longer lag phase, increased doubling time, fermentable carbon sources, poorly induced genes, diminished biomass accumulation, 107 subtelomeric orfs, single chromosome strain, sirtuin family deacetylases, ethanol growth could, subtelomeric dna, genes involved, diminished growth, strain resulted, reference strain, would otherwise, stepwise break, repair method, nuclear dna, model yeast, linear chromosomes, likely cause, heterochromatic regions, facilitate organization, ethanol metabolism, ethanol compared

Relation: https://figshare.com/articles/dataset/Additional_file_3_of_A_single_chromosome_strain_of_S_cerevisiae_exhibits_diminished_ethanol_metabolism_and_tolerance/16664482

الاتاحة: https://doi.org/10.6084/m9.figshare.16664482.v1