المؤلفون: Róg, Tomasz

المصدر: Neofilolog; Nr. 62/2 (2024): Nauczanie języków obcych w złożonej i dynamicznej rzeczywistości; 502-520 ; Neofilolog; No. 62/2 (2024): Teaching foreign languages in the complex and dynamic reality; 502-520 ; Neofilolog; No. 62/2 (2024): Nauczanie języków obcych w złożonej i dynamicznej rzeczywistości; 502-520 ; Neofilolog; No 62/2 (2024): Nauczanie języków obcych w złożonej i dynamicznej rzeczywistości; 502-520 ; Neofilolog; Nr 62/2 (2024): Nauczanie języków obcych w złożonej i dynamicznej rzeczywistości; 502-520 ; 2545-3971 ; 1429-2173

مصطلحات موضوعية: zadania, podejście zadaniowe, podejście wsparte zadaniami, nauczanie pragmatyki, sekwencje interakcyjne, tasks, task-based language teaching, (foreign language) teacher training, interactional sequences

وصف الملف: application/pdf

Relation: http://pressto.amu.edu.pl/index.php/n/article/view/39968/36164; http://pressto.amu.edu.pl/index.php/n/article/view/39968

الاتاحة: http://pressto.amu.edu.pl/index.php/n/article/view/39968

المؤلفون: Moliner, Rafael, Girych, Mykhailo, Brunello, Cecilia Anna, Kovaleva, Vera, Biojone, Caroline, Enkavi, Giray, Antenucci, Lina, Kot, Erik, Goncharuk, Sergey, Kaurinkoski, Katja, Kuutti, Mirjami, Fred, Senem Merve, Elsilä, Lauri, Sakson, Sven, Cannarozzo, Cecilia, Diniz, Cassiano Ricardo Alves Faria, Seiffert, Nina, Rubiolo, Anna, Haapaniemi, Hele, Mesi, Elsa, Nagaeva, Elina, Öhman, Tiina, Róg, Tomasz, Kankuri, Esko, Vilar, Marçal, Varjosalo, Markku, Korpi, Esa Risto, Permi, Perttu, Mineev, Konstantin S., Saarma, Mart, Vattulainen, Ilpo Tapio, Casarotto, PC, Castrén, Eero

المصدر: Moliner , R , Girych , M , Brunello , C A , Kovaleva , V , Biojone , C , Enkavi , G , Antenucci , L , Kot , E , Goncharuk , S , Kaurinkoski , K , Kuutti , M , Fred , S M , Elsilä , L , Sakson , S , Cannarozzo , C , Diniz , C R A F , Seiffert , N , Rubiolo , A , Haapaniemi , H , Mesi , E , Nagaeva , E , Öhman , T , Róg , T , Kankuri , ....

مصطلحات موضوعية: Allosteric Regulation, Animals, Antidepressive Agents/metabolism, Binding Sites, Brain-Derived Neurotrophic Factor/metabolism, Embryo, Mammalian/cytology, Female, HEK293 Cells, Hallucinogens/metabolism, Humans, Lysergic Acid Diethylamide/chemistry, Male, Mice, Inbred C57BL, Molecular Dynamics Simulation, Neuronal Plasticity/drug effects, Neurons/drug effects, Psilocybin/chemistry, Receptor, trkB/metabolism, Signal Transduction, /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being, name=SDG 3 - Good Health and Well-being

الاتاحة: https://cris.vtt.fi/en/publications/fb60f2ba-b422-46e0-96e6-169dc8c6258b
https://doi.org/10.1038/s41593-023-01316-5
http://www.scopus.com/inward/record.url?scp=85161237972&partnerID=8YFLogxK

المؤلفون: Krawiec, Marek, Kılıçkaya, Ferit, Róg, Tomasz

المصدر: Lublin Studies in Modern Languages and Literature; Vol 47, No 3 (2023): Lernen und Lehren einer Fremdsprache in Zeiten der Pandemien und Nicht-Pandemien (Gastherausgeber: Marek Krawiec, Ferit Kılıçkaya und Tomasz Róg); 1-5 ; 2450-4580 ; 0137-4699

وصف الملف: application/pdf

Relation: https://journals.umcs.pl/lsmll/article/view/16108/11014; https://journals.umcs.pl/lsmll/article/view/16108

الاتاحة: https://journals.umcs.pl/lsmll/article/view/16108
https://doi.org/10.17951/lsmll.2023.47.3.1-5

المؤلفون: Ragaller, Franziska, Andronico, Luca, Sykora, Jan, Kulig, Waldemar, Rog, Tomasz, Urem, Yagmur B., Abhinav, Abhinav, Danylchuk, Dmytro I., Hof, Martin, Klymchenko, Andrey S., Amaro, Mariana, Vattulainen, Ilpo, Sezgin, Erdinc

المصدر: Biophysical Journal ; volume 122, issue 3, page 224a ; ISSN 0006-3495

الاتاحة: http://dx.doi.org/10.1016/j.bpj.2022.11.1332
https://api.elsevier.com/content/article/PII:S0006349522022482?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0006349522022482?httpAccept=text/plain

المؤلفون: Kaptan, Shreyas, Girych, Mykhailo, Enkavi, Giray, Kulig, Waldemar, Sharma, Vivek, Vuorio, Joni, Rog, Tomasz, Vattulainen, Ilpo Tapio

المصدر: Kaptan , S , Girych , M , Enkavi , G , Kulig , W , Sharma , V , Vuorio , J , Rog , T & Vattulainen , I T 2022 , ' Maturation of the SARS-CoV-2 virus is regulated by dimerization of its main protease ' , Computational and Structural Biotechnology Journal , vol. 20 , pp. 3336-3346 . https://doi.org/10.1016/j.csbj.2022.06.023

مصطلحات موضوعية: Biophysics, Coronavirus, Machine learning, Molecular dynamics simulation, /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being, name=SDG 3 - Good Health and Well-being

الاتاحة: https://cris.vtt.fi/en/publications/5bbff96f-7d73-48a4-997b-bedc133ae51d
https://doi.org/10.1016/j.csbj.2022.06.023
http://www.scopus.com/inward/record.url?scp=85133239780&partnerID=8YFLogxK

المؤلفون: Oliveira, Aline A., Rog, Tomasz, da Silva, Alberico B. F., Amaro, Rommie E., Johnson, Mark S., Postila, Pekka A.

المساهمون: Doctoral Programme in Drug Research, Doctoral Programme in Materials Research and Nanosciences, Department of Physics

مصطلحات موضوعية: outer mitochondrial membrane (OMM), molecular dynamics (MD), negatively charged lipids, phosphatidylinositol (PI), phosphatidylserine (PS), membrane lipid composition (MLC), schizophrenia, monoamine oxidase B (MAO-B), PARTICLE MESH EWALD, MONOAMINE-OXIDASE, MOLECULAR-DYNAMICS, FORCE-FIELD, CHARMM, CHOLESTEROL, BILAYER, GUI, PHOSPHATIDYLSERINE, CONFORMATION, Physical sciences

وصف الملف: application/pdf

Relation: Oliveira , A A , Rog , T , da Silva , A B F , Amaro , R E , Johnson , M S & Postila , P A 2022 , ' Examining the Effect of Charged Lipids on Mitochondrial Outer Membrane Dynamics Using Atomistic Simulations ' , Biomolecules , vol. 12 , no. 2 , 183 . https://doi.org/10.3390/biom12020183; http://hdl.handle.net/10138/341775; bbf77a0f-20a5-4dab-a9fd-cd46ac57766d; 000763721900001

الاتاحة: http://hdl.handle.net/10138/341775

المؤلفون: Ragaller, Franziska, Andronico, Luca, Sykora, Jan, Kulig, Waldemar, Rog, Tomasz, Urem, Yagmur Balim, Abhinav, Danylchuk, Dmytro I., Hof, Martin, Klymchenko, Andrey, Amaro, Mariana, Vattulainen, Ilpo, Sezgin, Erdinc

المساهمون: Department of Physics

مصطلحات موضوعية: Physical sciences

وصف الملف: application/pdf

Relation: Ragaller , F , Andronico , L , Sykora , J , Kulig , W , Rog , T , Urem , Y B , Abhinav , Danylchuk , D I , Hof , M , Klymchenko , A , Amaro , M , Vattulainen , I & Sezgin , E 2022 , ' Dissecting the mechanisms of environment sensitivity of smart probes for quantitative assessment of membrane properties ' , Open biology , vol. 12 , no. 9 , 220175 . https://doi.org/10.1098/rsob.220175; ORCID: /0000-0001-7568-0029/work/124445447; ORCID: /0000-0001-7408-3214/work/124445548; http://hdl.handle.net/10138/351399; a4e3cfc3-7001-4e61-81cc-f82771dbc579; 85137790719; 000874962300003

الاتاحة: http://hdl.handle.net/10138/351399

المؤلفون: Plichta, Paweł, Mikos von Rohrscheidt, Armin, Iaromenko, Sergii, Róg, Tomasz, Duda, Anna, Mazur, Wojciech, Gorączko, Marcin, Kasprzak, Krzysztof, Raszka, Beata

Relation: Turystyka Kulturowa, nr 2 (123), s. 287-337; https://ruj.uj.edu.pl/xmlui/handle/item/325393; http://turystykakulturowa.org/ojs/index.php/tk/article/view/1362/1109

الاتاحة: https://ruj.uj.edu.pl/xmlui/handle/item/325393
http://turystykakulturowa.org/ojs/index.php/tk/article/view/1362/1109

المؤلفون: Oliveira, Aline A, Róg, Tomasz, da Silva, Albérico B F, Amaro, Rommie E, Johnson, Mark S, Postila, Pekka A

المصدر: Oliveira , A A , Róg , T , da Silva , A B F , Amaro , R E , Johnson , M S & Postila , P A 2022 , ' Examining the Effect of Charged Lipids on Mitochondrial Outer Membrane Dynamics Using Atomistic Simulations ' , Biomolecules , vol. 12 , no. 2 , 183 . https://doi.org/10.3390/biom12020183

مصطلحات موضوعية: Membrane Lipids/metabolism, Mitochondrial Membranes/metabolism, Molecular Dynamics Simulation, Phosphatidylcholines/chemistry, Phosphatidylserines

وصف الملف: application/pdf

الاتاحة: https://research.abo.fi/en/publications/fa67c6dc-fc7b-4e3f-94a7-bd3892281538
https://doi.org/10.3390/biom12020183
https://research.abo.fi/ws/files/49794219/biomolecules_12_00183_v2.pdf
https://urn.fi/URN:NBN:fi-fe2023030329400

المؤلفون: Róg, Tomasz, Krawiec, Marek

المصدر: TASK. Journal on Task-Based Language Teaching and Learning ; TASK / Journal on Task-Based Language Teaching and Learning ; TASK ; volume 4, issue 2, page 241-266 ; ISSN 2666-1748 2666-1756

الاتاحة: https://doi.org/10.1075/task.00034.rog
http://www.jbe-platform.com/deliver/fulltext/task.00034.rog.pdf

المؤلفون: Kaptan, Shreyas, Girych, Mykhailo, Enkavi, Giray, Kulig, Waldemar, Sharma, Vivek, Vuorio, Joni, Rog, Tomasz, Vattulainen, Ilpo

Relation: https://doi.org/10.5281/zenodo.5758985; https://doi.org/10.5281/zenodo.5758986; oai:zenodo.org:5758986

الاتاحة: https://doi.org/10.5281/zenodo.5758986

المؤلفون: Cannarozzo, Cecilia, Fred, Senem Merve, Girych, Mykhailo, Biojone, Caroline, Enkavi, Giray, Rog, Tomasz, Vattulainen, Ilpo Tapio, Casarotto, PC, Castrén, Eero

المصدر: Cannarozzo , C , Fred , S M , Girych , M , Biojone , C , Enkavi , G , Rog , T , Vattulainen , I T , Casarotto , PC & Castrén , E 2021 , ' Cholesterol‐recognition motifs in the transmembrane domain of the tyrosine kinase receptor family: The case of TRKB ' , European Journal of Neuroscience , vol. 53 , no. 10 , pp. 3311-3322 . https://doi.org/10.1111/ejn.15218

مصطلحات موضوعية: BDNF, TRKB, cholesterol-recognition motif, tyrosine kinase family, /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being, name=SDG 3 - Good Health and Well-being

الاتاحة: https://cris.vtt.fi/en/publications/8d02764d-7390-4fe9-a9a7-42c147b9313b
https://doi.org/10.1111/ejn.15218
http://www.scopus.com/inward/record.url?scp=85104548790&partnerID=8YFLogxK

المؤلفون: Rog, Tomasz, Girych, Mykhailo, Bunker, Alex

المصدر: Rog , T , Girych , M & Bunker , A 2021 , ' Mechanistic Understanding from Molecular Dynamics in Pharmaceutical Research 2: Lipid Membrane in Drug Design ' , Pharmaceuticals , vol. 14 , no. 10 , 1062 . https://doi.org/10.3390/ph14101062

مصطلحات موضوعية: Antimicrobial peptides, Drugs, Membrane disruption, Membrane proteins, Molecular modeling, Permeability

الاتاحة: https://cris.vtt.fi/en/publications/2160a8ce-c9c4-4dd9-9c2f-174ab2748e17
https://doi.org/10.3390/ph14101062
http://www.scopus.com/inward/record.url?scp=85119521495&partnerID=8YFLogxK

المؤلفون: Kukkurainen, Sampo, Azizi, Latifeh, Zhang, Pingfeng, Jacquier, Marie Claude, Baikoghli, Mo, von Essen, Magdaléna, Tuukkanen, Anne, Laitaoja, Mikko, Liu, Xiaonan, Rahikainen, Rolle, Orłowski, Adam, Jänis, Janne, Määttä, Juha A. E., Varjosalo, Markku, Vattulainen, Ilpo, Róg, Tomasz, Svergun, Dmitri, Cheng, R. Holland, Wu, Jinhua, Hytönen, Vesa P., Wehrle-Haller, Bernhard

المساهمون: Tampere University, BioMediTech, Department of Clinical Chemistry, Physics

مصطلحات موضوعية: 3111 Biomedicine, 1182 Biochemistry, cell and molecular biology

وصف الملف: fulltext

Relation: 19; 133; https://trepo.tuni.fi/handle/10024/134611

الاتاحة: https://trepo.tuni.fi/handle/10024/134611
https://doi.org/10.1242/jcs.239202

المؤلفون: Casarotto, Plinio C., Girych, Mykhailo, Fred, Senem M., Kovaleva, Vera, Moliner, Rafael, Enkavi, Giray, Biojone, Caroline, Cannarozzo, Cecilia, Sahu, Madhusmita Pryiadrashini, Kaurinkoski, Katja, Brunello, Cecilia A., Steinzeig, Anna, Winkel, Frederike, Patil, Sudarshan, Vestring, Stefan, Serchov, Tsvetan, Diniz, Cassiano R.A.F., Laukkanen, Liina, Cardon, Iseline, Antila, Hanna, Rog, Tomasz, Piepponen, Timo Petteri, Bramham, Clive R., Normann, Claus, Lauri, Sari E., Saarma, Mart, Vattulainen, Ilpo, Castrén, Eero

المساهمون: Tampere University, Physics

مصطلحات موضوعية: 114 Physical sciences

وصف الملف: fulltext

Relation: 184; https://trepo.tuni.fi/handle/10024/131830; URN:NBN:fi:tuni-202105064527

الاتاحة: https://trepo.tuni.fi/handle/10024/131830
https://doi.org/10.1016/j.cell.2021.01.034

المؤلفون: Kulig, Waldemar, Korolainen, Hanna, Zatorska, Maria, Kwolek, Urszula, Wydro, Pawel, Kepczynski, Mariusz, Rog, Tomasz

المساهمون: Materials Physics, Department of Physics

مصطلحات موضوعية: ATOM FORCE-FIELD, LIPID-BILAYERS, DYNAMICS, BINDING, CHOLESTEROL, GROMACS, ORGANIZATION, SIMULATIONS, IONS, Physical sciences

وصف الملف: application/pdf

Relation: For financial support, we thank the Academy of Finland Center of Excellence program (grant no. 307415 (W.K., T.R.)). The project was financed by the National Science Centre, Poland (grant no. 2016/21/B/ST5/00250). CSC-IT Centre for Science (Espoo, Finland; project number tty3995) and the Finnish Grid and Cloud Infrastructure (persistent identifier urn:nbn:fi:research-infras-2016072533) are acknowledged for excellent computational resources. The research was carried out using the equipment purchased thanks to the financial support of the National Science Centre, Poland (grant no. 2014/13/B/ST5/04510).; Kulig , W , Korolainen , H , Zatorska , M , Kwolek , U , Wydro , P , Kepczynski , M & Rog , T 2019 , ' Complex Behavior of Phosphatidylcholine-Phosphatidic Acid Bilayers and Monolayers : Effect of Acyl Chain Unsaturation ' , Langmuir , vol. 35 , no. 17 , pp. 5944-5956 . https://doi.org/10.1021/acs.langmuir.9b00381; ORCID: /0000-0001-7568-0029/work/57800532; ORCID: /0000-0002-8166-9202/work/68617651; http://hdl.handle.net/10138/326547; e9d978a3-2b46-43d5-beed-0721bd01b685; 000466816900032

الاتاحة: http://hdl.handle.net/10138/326547

المؤلفون: Lautala, Saara, Provenzani, Riccardo, Koivuniemi, Artturi, Kulig, Waldemar, Talman, Virpi, Rog, Tomasz, Tuominen, Raimo K., Yli-Kauhaluoma, Jari, Bunker, Alex Edwin

المساهمون: Division of Pharmaceutical Biosciences, Division of Pharmaceutical Chemistry and Technology, Pharmaceutical biophysics group, Department of Physics, Drug Research Program, Division of Pharmacology and Pharmacotherapy, Regenerative cardiac pharmacology, Regenerative pharmacology group, Pharmaceutical Design and Discovery group, Medicinal Chemistry research group

مصطلحات موضوعية: Chemical sciences, Pharmacy

وصف الملف: application/pdf

Relation: Lautala , S , Provenzani , R , Koivuniemi , A , Kulig , W , Talman , V , Rog , T , Tuominen , R K , Yli-Kauhaluoma , J & Bunker , A E 2020 , ' Rigorous computational study reveals what docking overlooks : Double trouble from membrane association in protein kinase C modulators ' , Journal of Chemical Information and Modeling , vol. 60 , no. 11 , pp. 5624-5633 . https://doi.org/10.1021/acs.jcim.0c00624; ORCID: /0000-0002-1236-9513/work/84701338; ORCID: /0000-0002-2702-6505/work/84702125; ORCID: /0000-0002-6780-1924/work/84704247; ORCID: /0000-0001-7568-0029/work/84704680; ORCID: /0000-0002-3979-7809/work/84706574; ORCID: /0000-0003-0370-7653/work/84702851; http://hdl.handle.net/10138/334259; ccf6185a-9296-411a-b259-6ca39cbe63e1; 000595488600029

الاتاحة: http://hdl.handle.net/10138/334259

المؤلفون: Kasparyan, Gari, Poojari, Chetan, Rog, Tomasz, Hub, Jochen S.

المساهمون: Department of Physics

مصطلحات موضوعية: ATOM FORCE-FIELD, MOLECULAR-DYNAMICS SIMULATIONS, INFECTIOUS-DISEASES-SOCIETY, PARTICLE MESH EWALD, DIMETHYL-SULFOXIDE, ITRACONAZOLE THERAPY, DRUG ITRACONAZOLE, ION-TRANSPORT, PHARMACOKINETICS, LIPOSOMES, Physical sciences, Chemical sciences

وصف الملف: application/pdf

Relation: G.K. and C.P. were supported by the Deutsche Forschungsgemeinschaft via Grants SFB 803/A12 and SFB 1027/B7, respectively.; Kasparyan , G , Poojari , C , Rog , T & Hub , J S 2020 , ' Cooperative Effects of an Antifungal Moiety and DMSO on Pore Formation over Lipid Membranes Revealed by Free Energy Calculations ' , Journal of Physical Chemistry B , vol. 124 , no. 40 , pp. 8811-8821 . https://doi.org/10.1021/acs.jpcb.0c03359; http://hdl.handle.net/10138/334328; f596b9ae-c1b8-4284-baf5-36a91c91a233; 000580559100008

الاتاحة: http://hdl.handle.net/10138/334328

المؤلفون: Augustyn, Bozena, Stepien, Piotr, Poojari, Chetan, Mobarak, Edouard, Polit, Agnieszka, Wisniewska-Becker, Anna, Rog, Tomasz

المساهمون: Department of Physics

مصطلحات موضوعية: DYNAMICS, GUI, STABILIZATION, STABILITY, MEMBRANES, BILAYERS, SPECTRA, EPR, Chemical sciences, Physical sciences

وصف الملف: application/pdf

Relation: For financial support, we thank the Academy of Finland's Center of Excellence program (Grant no. 307415 (PC, TR)). CSC-IT Centre for Science (Espoo, Finland; project number tty3995) and the Finnish Grid and Cloud Infrastructure (persistent identifier urn:nbn:fi:research-infras-2016072533) are acknowledged for excellent computational resources. This work was also supported by the Bratniak Foundation of Jagiellonian University which covered partially the cost of BA visiting in Finland. Faculty of Biochemistry, Biophysics and Biotechnology of Jagiellonian University is a partner of the Leading National Research Center (KNOW) supported by the Ministry of Science and Higher Education.; Augustyn , B , Stepien , P , Poojari , C , Mobarak , E , Polit , A , Wisniewska-Becker , A & Rog , T 2019 , ' Cholesteryl Hemisuccinate Is Not a Good Replacement for Cholesterol in Lipid Nanodiscs ' , Journal of Physical Chemistry B , vol. 123 , no. 46 , pp. 9839-9845 . https://doi.org/10.1021/acs.jpcb.9b07853; ORCID: /0000-0003-3377-5753/work/66366977; http://hdl.handle.net/10138/326559; ae789c0a-9ae7-4c1f-8555-3ba1e8e681d1; 000499739800012

الاتاحة: http://hdl.handle.net/10138/326559

المؤلفون: Lolicato, Fabio, Juhola, Hanna, Zak, Agata, Postila, Pekka A., Saukko, Annina, Rissanen, Sami, Enkavi, Giray, Vattulainen, Ilpo, Kepczynski, Mariusz, Rog, Tomasz

المساهمون: Department of Physics, Materials Physics

مصطلحات موضوعية: synaptic neurotransmission, ligand entry pathway prediction, lipid membrane, molecular dynamics, random acceleration molecular dynamics, umbrella sampling, PARTICLE MESH EWALD, ATOM FORCE-FIELD, MOLECULAR-DYNAMICS, POTENTIAL FUNCTIONS, MELATONIN, AFFINITY, PATHWAYS, CALCIUM, GROMACS, RELEASE, Physical sciences

وصف الملف: application/pdf

Relation: This work was supported by the Academy of Finland (Center of Excellence program). I.V. also thanks Sigrid Juselius Foundation and the Helsinki Institute of Life Science (HiLIFE) Fellow program. For computational resources, we thank CSC - IT Centre for Science Ltd (Espoo, Finland). Experimental research was carried out with equipment purchased thanks to the financial support of the National Science Centre, Poland (Grant No. 2016/21/B/ST5/00250).; Lolicato , F , Juhola , H , Zak , A , Postila , P A , Saukko , A , Rissanen , S , Enkavi , G , Vattulainen , I , Kepczynski , M & Rog , T 2020 , ' Membrane-Dependent Binding and Entry Mechanism of Dopamine into Its Receptor ' , ACS chemical neuroscience , vol. 11 , no. 13 , pp. 1914-1924 . https://doi.org/10.1021/acschemneuro.9b00656; ORCID: /0000-0001-7408-3214/work/79519752; http://hdl.handle.net/10138/326578; 33d8600e-1031-4aec-825d-01749cdcf15a; 000547324200010

الاتاحة: http://hdl.handle.net/10138/326578